Background
Methods
Gonococcal isolates and susceptibility testing
Sequence-based molecular epidemiologic studies
Statistical analysis
Ethics approval
Results
Antimicrobial susceptibility testing
MIC | |||
---|---|---|---|
Year | 1 mg/L | ≥ 2 mg/L | Total |
2009 | 19.3 % (17/88) | 4.5 % (4/88) | 23.9 % (21/88) |
2010 | 8.4 % (7/83) | 4.8 % (4/83) | 13.3 % (11/83) |
2011 | 0.9 % (1/114) | 7.9 % (9/114) | 8.8 % (10/114) |
2012 | 2.0 % (2/100) | 17.0 % (17/100) | 19.0 % (19/100) |
2013 | 6.0 % (6/100) | 10.0 % (10/100) | 16.0 % (16/100) |
Total | 6.8 % (33/485) | 9.1 % (44/485) | 15.9 % (77/485) |
AZM-LLR (n = 33) | AZM-MLR (n = 44) | ||||
---|---|---|---|---|---|
Totalc
| CROD
| Totalc
| CROD
| ||
n (%) |
n (%) |
n (%) |
n (%) |
P
| |
Antimicrobial resistance | 33 (100.0) | 6 (18.2) | 44 (100) | 19 (43.2) | b < 0.05 |
23 S rRNA | |||||
WT | 32 (97.0) | 5 (15.2) | 38 (86.3) | 13 (29.5) | a, b > 0.05 |
C2611TS
| 1 (3.0) | 1 (3.0) | 1 (2.3) | 1 (2.3) | |
C2611TAll
| 0 (0.0) | 0 (0.0) | 5 (11.4) | 5 (11.4) | |
mtrR
| |||||
Deletiona
| |||||
Yes | 29 (87.9) | 6 (18.2) | 42 (95.5) | 19 (43.3) | a > 0.05, b: ND |
No | 4 (12.1) | 0 (0.0) | 2 (4.5) | 0 (0.0) | |
Mutations | |||||
WTb
| 2 (6.1) | 0 (0.0) | 2 (4.5) | 0 (0.0) | a, b > 0.05 |
A39T | 7 (21.2) | 4 (12.1) | 6 (13.6) | 4 (9.1) | |
G45D | 8 (24.2) | 1 (3.0) | 5 (11.3) | 2 (4.5) | |
H105Y | 16 (48.5) | 1 (3.0) | 26 (59.1) | 11 (25.0) | |
A39T/ F62L | 0 (0.0) | 0 (0.0) | 1 (2.3) | 0 (0.0) | |
A40D/T86A | 0 (0.0) | 0 (0.0) | 1 (2.3) | 0 (0.0) | |
A40D/T86A/H105Y | 0 (0.0) | 0 (0.0) | 1 (2.3) | 1 (2.3) | |
D79N/T86A/H105Y | 0 (0.0) | 0 (0.0) | 1 (2.3) | 1 (2.3) | |
T86A/ H105Y | 0 (0.0) | 0 (0.0) | 1 (2.3) | 0 (0.0) | |
Mutation patterns in PBP2 | |||||
II or XIV | 3 (9.1) | 0 (0.0) | 4 (9.1) | 0 (0.0) | a, b > 0.05 |
V | 6 (18.2) | 1 (3.0) | 8 (18.2) | 3 (6.8) | |
VII | 0 (0.0) | 0 (0.0) | 1 (2.3) | 0 (0.0) | |
VIII | 0 (0.0) | 0 (0.0) | 1 (2.3) | 1 (2.3) | |
XII | 2 (6.1) | 0 (0.0) | 2 (4.6) | 1 (2.3) | |
XIII | 2 (6.1) | 0 (0.0) | 0 (0.0) | 0 (0.0) | |
XVII | 2 (6.1) | 1 (3.0) | 0 (0.0) | 0 (0.0) | |
XVIII | 5 (15.2) | 2 (6.1) | 13 (29.4) | 10 (22.6) | |
XXI | 7 (21.2) | 1 (3.0) | 8 (18.2) | 3 (6.8) | |
XXVII | 4 (12.2) | 0 (0.0) | 6 (13.6) | 1 (2.3) | |
New 1d
| 1 (3.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) | |
New 2d
| 1 (3.0) | 1 (3.0) | 0 (0.0) | 0 (0.0) | |
New 3d
| 0 (0.0) | 0 (0.0) | 1 (2.3) | 0 (0.0) | |
23rRNA/mtrR/penA mutation patterns | |||||
WT/A-;H105Y/XVIII | 2 (6.1) | 0 (0.0) | 4 (9.1) | 3 (6.8) | a, b > 0.05 |
WT/A-;H105Y/V | 6 (18.2) | 1 (3.0) | 6 (13.6) | 3 (6.8) | |
WT/A-;H105Y/XXI | 2 (6.1) | 0 (0.0) | 6 (13.6) | 2 (4.5) | |
WT/A-;G45D/XXI | 4 (12.1) | 3 (9.1) | 0 (0.0) | 0 (0.0) | |
WT/A-;A39T/XVIII | 3 (9.1) | 3 (9.1) | 5 (11.4) | 3 (6.8) | |
C2611TAll/A-;H105Y/XVIII | 0 (0.0) | 0 (0.0) | 2 (4.5) | 2 (4.5) | |
C2611TAll/A-;G45D/XXI | 0 (0.0) | 0 (0.0) | 2 (4.5) | 2 (4.5) | |
Other patterns | 16 (48.5) | 2 (6.1) | 17 (38.6) | 2 (4.5) |
23S rRNA, mtrR and penA mutations in AZM-R N. gonorrhoeae isolates
NG-MAST and phylogenetic analysis based on porB and tbpB DNA sequences
AZM-LLR (n = 33) | AZM-MLR (n = 44) | |||
---|---|---|---|---|
Totalb
| CROD
| Totalb
| CROD
| |
NG-MAST ST |
n (%) |
n (%) |
n (%) |
n (%) |
270 | 0 (0.0) | 0 (0.0) | 1 (2.3) | 1 (2.3) |
304 | 0 (0.0) | 0 (0.0) | 2 (4.5) | 0 (0.0) |
421 | 2 (6.1) | 0 (0.0) | 0 (0.0) | 0 (0.0) |
1053 | 1 (3.0) | 0 (0.0) | 1 (2.3) | 1 (2.3) |
1055 | 0 (0.0) | 0 (0.0) | 2 (4.5) | 0 (0.0) |
1056 | 0 (0.0) | 0 (0.0) | 1 (2.3) | 0 (0.0) |
1412 | 1 (3.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) |
1731 | 1 (3.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) |
1766 | 3 (9.1) | 0 (0.0) | 3 (6.8) | 0 (0.0) |
1866 | 2 (6.1) | 0 (0.0) | 1 (2.3) | 0 (0.0) |
1972 | 1 (3.0) | 1 (3.0) | 0 (0.0) | 0 (0.0) |
2103 | 1 (3.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) |
2384 | 0 (0.0) | 0 (0.0) | 1 (2.3) | 1 (2.3) |
3079 | 1 (3.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) |
3252 | 0 (0.0) | 0 (0.0) | 1 (2.3) | 1 (2.3) |
3356 | 0 (0.0) | 0 (0.0) | 1 (2.3) | 1 (2.3) |
3460 | 1 (3.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) |
4313 | 0 (0.0) | 0 (0.0) | 1 (2.3) | 1 (2.3) |
4539 | 1 (3.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) |
5061 | 0 (0.0) | 0 (0.0) | 1 (2.3) | 1 (2.3) |
5062 | 0 (0.0) | 0 (0.0) | 1 (2.3) | 0 (0.0) |
5179 | 1 (3.0) | 1 (3.0) | 0 (0.0) | 0 (0.0) |
5990 | 0 (0.0) | 0 (0.0) | 1 (2.3) | 0 (0.0) |
6987 | 0 (0.0) | 0 (0.0) | 2 (4.5) | 1 (2.3) |
7101 | 0 (0.0) | 0 (0.0) | 1 (2.3) | 1 (2.3) |
8776 | 1 (3.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) |
9176 | 0 (0.0) | 0 (0.0) | 1 (2.3) | 1 (2.3) |
9944 | 1 (3.0) | 0 (0.0) | 0 (0.0) | 0 (0.0) |
10199 | 0 (0.0) | 0 (0.0) | 1 (2.3) | 1 (2.3) |
10205 | 0 (0.0) | 0 (0.0) | 1 (2.3) | 1 (2.3) |
10337 | 0 (0.0) | 0 (0.0) | 1 (2.3) | 0 (0.0) |
10352 | 0 (0.0) | 0 (0.0) | 1 (2.3) | 0 (0.0) |
10359 | 0 (0.0) | 0 (0.0) | 1 (2.3) | 0 (0.0) |
11181 | 0 (0.0) | 0 (0.0) | 1 (2.3) | 0 (0.0) |
Newa
| 15 (45.5) | 4 (12.1) | 16 (36.4) | 7 (15.9) |