Bacteriophages for treating urinary tract infections in patients undergoing transurethral resection of the prostate: a randomized, placebo-controlled, double-blind clinical trial

This study is a randomized, placebo-controlled, double-blind trial investigating bacteriophages in UTI treatment. The study is conducted at the Tzulukidze National Center of Urology (TNCU), Tbilisi, Georgia. Phage preparations (i.e. Pyo bacteriophage solution: commercially available and registered in Georgia) and continuous adaption cycles during the course of the study, to enhance the treatment effect, are done at the Eliava Institute of Bacteriophages, Microbiology, and Virology in Tbilisi (EIBMV), Georgia.

Figure 1 gives an overview of the procedures. Patients planned for transurethral resection of the prostate are screened for UTIs at the TNCU. Urine cultures including antibiotic sensitivity testing are performed in a duplicate manner. If eligible microorganisms which would potentially match with the type of bacteriophage present in Pyo bacteriophage (5 components: Enterococcus spp., Escherichia coli, Proteus mirabilis, Pseudomonas aeruginosa, Staphylococcus spp., and Streptococcus spp.) are detected, urine cultures are then sent for bacteriophage sensitivity testing to the EIBMV (Fig. 2) [12]. In case of a positive in-vitro sensitivity testing, concluded within 24 h after receipt of the urine culture, patients will be asked for study participation. After written informed consent, patients are randomized in a double-blind fashion to the study treatment arms in a 1:1:1 ratio to receive either: a) Pyo bacteriophage solution, b) placebo (sterile bacteriology media with identical color as treatment arm a), or c) antibiotic treatment according to the antibiotic sensitivity pattern, respectively. Treatment arms a and b will be double-blind but treatment arm c, i.e. the control arm representing common clinical practice, is open label. All treatments are intended for 7 days starting at the day of surgery (arm c) or one day thereafter (arm a and b). Prior and at the end of treatment (i.e. after 7 days) or at withdrawal / drop out, urinalysis, urine culture, bladder and pain diary [18] and an International Prostate Symptom Score (IPSS) questionnaire [19] will be taken. Patients with persistent bacteriuria will undergo antibiotic treatment according to antibiotic sensitivity.

Note: As it is common practice when working with bacteriophage cocktails, the Pyo bacteriophage will be subjected to adaptation cycles during the course of the study.

According to the inclusion and exclusion criteria (Table 1), we will investigate patients planned for transurethral resection of the prostate presenting with UTIs (defined as ≥10⁴ colony forming units/mL and symptoms such as urgency, frequency, and/or dysuria). The following variables will be considered: age, type of bladder emptying, prostate size, urinalysis, bladder and pain diary, IPSS questionnaire.

We are planning a study of independent cases and controls with 1 control per case. Superiority of bacteriophage versus placebo treatment: We assume the success rate among controls to be 0.2. If the true success rate for experimental subjects is 0.6, we will need to study 27 experimental and 27 control subjects to be able to reject the null hypothesis that the success rates for experimental and control subjects are equal with probability (power) 0.8. The type I error probability associated with this test of this null hypothesis is 0.05.

Non-inferiority of bacteriophage versus antibiotic treatment: We assume the success rate among subjects receiving bacteriophage treatment to be 0.6 and we accept a non-inferiority margin of 0.35. If the true success rate for experimental subjects is 0.95, we will need to study 27 experimental subjects and 27 control subjects to be able to remain within the non-inferiority margin with a probability (power) 0.8. The type I error probability associated with this test of this alternative hypothesis is 0.05. We will use a continuity-corrected chi-squared statistic or Fisher’s exact test to evaluate these hypotheses.

Thus, we will include 27 patients per treatment group, i.e. 81 patients in total. Withdrawn patients will be replaced.

Tzulukidze National Center of Urology, Tbilisi, Georgia: Patient treatment.

Eliava Institute of Bacteriophages, Microbiology, and Virology in Tbilisi, Georgia: Phage preparation and adaptation.

Neuro-Urology, Spinal Cord Injury Center & Research, University of Zürich, Balgrist University Hospital, Zürich, Switzerland: Study design, monitoring and statistical support.

The patients planned for transurethral resection of the prostate with a positive urine culture (≥10⁴ colony forming units/mL) of predefined uropathogens sensitive to Pyo bacteriophage (i.e. Enterococcus spp., Escherichia coli, Proteus mirabilis, Pseudomonas aeruginosa, Staphylococcus spp., and Streptococcus spp.) and fulfilling the study inclusion criteria will be included into the study after providing written informed consent. The patients will be assessed using bladder and pain diary [18] and an IPSS questionnaire [19]. The Fig. 1 gives an overview of the procedures that patients will undergo during the study.

After inclusion, patients will be randomized in a double-blind fashion to the study treatment arms in a 1:1:1 ratio. Patients of all study arms will undergo monopolar transurethral resection of the prostate and insertion of a suprapubic catheter if not already present. Study arm a) will receive bacteriophage solution (Pyo bacteriophage) and study arm b) placebo solution (sterile bacteriology media). Either solution will consist of 20 mL and will have an identical appearance for both the bacteriophage and the placebo, respectively. An investigator not involved in the assessment of the clinical outcome will deliver the solution and teach the patient / health care provider how to instill the solution into the bladder. The solution will be instilled using the suprapubic catheter, 2 times per 24 h (i.e. 8.00, 20.00) for 7 days, starting the first day after surgery. The patients will be asked to retain the solution in the bladder for approximately 30–60 min. No antibiotic prophylaxes will be given to the study treatment arms a and b.

Study arm c) will receive an antibiotic treatment according to the antibiotic sensitivity pattern and common clinical practice.

At the end of treatment (i.e. after 7 days) or at withdrawal / drop out, urinalysis, urine culture, bladder and pain diary [18] and an IPSS questionnaire [19] will be taken. Patients with persistent UTIs will undergo antibiotic treatment according to antibiotic sensitivity for 7 days.

Drop out criteria for patients in the study arm a and b are fever >38 °C, CRP >100 mg/L, other clinical signs or symptoms for a systemic infection or withdraw from the patients. These patients will undergo antibiotic treatment according to antibiotic sensitivity.

The investigators will inform the patients, the study monitoring board, and the ethics committee if it becomes evident that the disadvantages of participation may be significantly greater than was foreseen in the research proposal. The study will be suspended pending further review by the study monitoring board, except insofar as suspension would jeopardize the patients’ health. The investigators will take care that all patients are kept informed.

Adverse events will be assessed and categorized according to the National Cancer Institute Common Terminology Criteria for Adverse Events (CTCAE) version 4 in grade 1 to 5 (http://​ctep.​cancer.​gov/​protocolDevelopm​ent/​electronic_​applications/​ctc.​htm). All adverse events will be followed until they have abated, or until a stable situation has been reached. Depending on the event, follow-up may require additional tests or medical procedures as indicated, and/or referral to the general physician or a medical specialist.

In the case of withdrawal of consent to participate in the study, all possible efforts will be made to convince the patient to continue to have safety follow-up evaluations.

In the event one of the following situations arises among treated patients during the conduct of the study, the study will be temporarily suspended and a comprehensive safety review conducted evaluating if the study has to be terminated prematurely:

Primary: Success of intravesical treatment, defined as normalization of urine culture (no evidence of bacteria, i.e. <10⁴ colony forming units/mL) after 7 days of bacteriophage, placebo, or antibiotic treatment.

Secondary: Adverse events, in categorization according to the National Cancer Institute Common Terminology Criteria for Adverse Events (CTCAE) version 4 in grade 1 to 5 (http://​ctep.​cancer.​gov/​protocolDevelopm​ent/​electronic_​applications/​ctc.​htm) during treatment phase.

Tertiary: a) Changes in bladder and pain diary assessment of number of voids, number of leakages, post void residual, pain assessment using a visual analog scale (0 (no pain) to 10 (strongest possible pain)), b) IPSS items at baseline versus day 7 under intravesical bacteriophage, placebo, or antibiotic treatment.