Introduction
Atopic dermatitis (AD) is a complex disease that is determined by genetic, environmental and immunologic factors [
1,
2]. Interleukin-13 (IL-13) is a central pathogenic inflammatory mediator of AD which drives effects such as a defective skin barrier, dermal inflammation, allergic response and lichenification [
3‐
5]. IL-13 gene polymorphisms [
4,
6‐
8] are associated with an increased risk for developing AD. IL-13 can reduce epithelial integrity through the downregulation of filaggrin, loricrin and involucrin
[6,
9], increasing the risk of sensitization to environmental allergens. Additionally, IL-13 can act on keratinocytes to downregulate their differentiation [
10,
11], decrease the production of antimicrobial peptides [
12] and induce the production of T-cell chemoattractants that mediate T-cell infiltration into AD lesions [
13]. IL-13-mediated tissue inflammation promotes fibrotic skin remodeling and skin thickening [
14]. Finally, IL-13 may also sensitize peripheral sensory neurons that induce pruritus [
15]. In skin biopsies of patients with AD, there is an overexpression of IL-13 in lesional and nonlesional skin compared to healthy individuals with the severity of AD being directly related to the IL-13 levels [
16,
17]. At the lesional level, there is evidence of IL-13 overexpression with nearly undetectable expression of interleukin-4 (IL-4) suggesting that AD is an IL-13 dominant disease [
7,
17,
18].
IL-13 is a cytokine secreted by T helper type 2 (Th2) cells and natural killer cells, as well as mast cells, basophils, eosinophils and innate lymphoid cell (ILC) type 2 cells [
19]. The secondary structural features of IL-13 are like those of IL-4; however, IL-13 only has 25% sequence homology to IL-4 [
20,
21]. The IL-13 receptor is a heterodimeric receptor complex consisting of IL-4 receptor α (IL-4Rα) and IL-13 receptor α1 (IL-13Rα1). Heterodimerization of the receptor complex activates STAT6 signaling, which is important in initiation of the type 1 allergic response [
22]. IL-13 also binds to another receptor known as IL-13 receptor α 2 (IL-13Rα2). This receptor has no significant cytoplasmic domain, does not seem to function as a signal mediator and often is referred to as the decoy receptor [
23,
24]. The expression of IL-13Rα2 can be induced by several pro-inflammatory cytokines, including IL-13 and IL-4, as well as tumor necrosis factor α (TNFα), suggesting this is a negative feedback mechanism [
25,
26].
Lebrikizumab is a monoclonal immunoglobulin G4 antibody that specifically binds and neutralizes IL-13. Lebrikizumab has an affinity to human IL-13 that is < 10 pM with an epitope that allows IL-13 to bind to IL-13Rα1, but inhibits human IL-13 signaling through the IL-4Rα/IL-13Rα1 receptor complex [
27]. Lebrikizumab is in phase 3 development for moderate-to-severe AD (NCT04146363 and NCT04178967). Tralokinumab and cendakimab are mAbs to IL-13 that prevent its binding to IL-13Rα1 [
28,
29]. Tralokinumab has recently been approved for the treatment of moderate-to-severe AD in adults [
30]. Cendakimab is in phase 2 development for moderate-to-severe AD (NCT04800315). Here, we describe results from studies aiming to compare the in vitro binding affinities and cell-based functional activities of lebrikizumab, tralokinumab and cendakimab. Additionally, we investigated whether IL-13 mAb binding interfered with IL-13 binding to IL-13Rα2 and its subsequent internalization.
The purpose of this study was to compare the in vitro binding affinities and cell-based functional activities of clinical IL-13 monoclonal antibodies, with the goal of aiding understanding of the differences seen in clinical trial results reported to date.
Methods
Expression and Purification of Recombinant IL-13 and IL-4
Mammalian expression plasmids encoding either His-tagged human IL-13 (P35225) or His-tagged human IL-4 (P24394) were generated. The vectors were transiently transfected into Human Embryonic Kidney 293 (HEK293) cells (ATCC, Manassas, VA, USA). IL-13 (N-1) His-tag was purified from the harvest media using Q Sepharose FF column in tandem with IMAC capture followed by HiLoad 26/600 Superdex 75 (Cytiva). IL-13 was expressed as glycosylated and aglycosylated species, which were separated on Superdex column. Purified glycosylated IL-13, aglycosylated IL-13 and IL-4 were evaluated for purity and identity using SDS-PAGE and analytical size-exclusion chromatography (aSEC) using TSKgel UP-SW3000 column (TOSOH and LC/MS analysis. Endotoxin was measured at < 1 EU/mg using Endosafe ® PTS (Charles River Laboratories).
Generation of Fluorophore-labeled Recombinant IL-13 and IL-4
To visualize cytokine binding, recombinant glycosylated IL-13 and IL-4 were labeled with Alexa Fluor (AF) 568 by site-selective click chemistry using 10 mol equivalents of AZDye 568 DBCO (Click Chemistry Tool, 1294–5). Free dye was separated from conjugated protein using HiLoad 26/600 Superdex 200 size-exclusion chromatography column (Cytiva, 28–9893-36). The activity of the fluorophore-conjugated protein (IL-13-AF568, IL-4-AF568) was confirmed in a HEK293 STAT6 reporter assay. AF568 labeling of IL-13 did not change the IL-13 activity, whereas AF568-labeled IL-4 had reduced bioactivity (Supplement Fig. 1). In subsequent experiments both IL-13 and IL-4 were used at 500 ng/ml, which is above saturating conditions.
Expression and Purification of mAbs
Mammalian expression vectors encoding the respective heavy chain (HC) and light chain (LC) genes of tralokinumab (CAS: 1044515–88-9) and cendakimab (CAS: 2151032–62-9) were generated and transiently transfected into Chinese Hamster Ovary cells (Lonza). The mAbs were purified from the harvest media using Protein-A affinity chromatography (Cytiva) followed by cation exchange chromatography (Thermo Fisher). Purified mAbs were buffer exchanged into phosphate-buffered saline (PBS), pH7.2, and evaluated for purity and identity using SDS-PAGE, aSEC and LC/MS analysis. Endotoxin was measured at < 1 EU/mg using Endosafe ® PTS (Charles River Laboratories). At the time of this study marketed tralokinumab and cendakimab were not available for purchase. Therefore, these mAbs were expressed and purified at Eli Lilly and Company. Lebrikizumab and IgG control antibody were expressed using Chinese Hamster Ovary cells and were also purified at Eli Lilly and Company.
Binding Kinetics and Affinity
The binding kinetics and affinity of lebrikizumab, tralokinumab and cendakimab to human IL-13 were determined using a Biacore T200 instrument primed with HBS-EP + , 0.05 mg/ml BSA (10 mM Hepes pH 7.4, 150 mM NaCl, 3 mM EDTA and 0.05% surfactant P20 (GE Healthcare Life Sciences, Marlborough, MA, USA) running buffer with analysis temperature at 37 °C. Protein A was immobilized on flow cells of a CM4 chip using amine coupling (Cytiva, BR100050) to enable antibody capture. Antibody samples were prepared at 5 µg/ml. IL-13 samples were prepared at final concentrations of 100, 50, 25, 12.5, 6.25, 3.125, 1.56, 0.78, 0.39 and 0 (blank) nM in running buffer. Data were processed using standard double referencing and fit to a 1:1 binding model using Biacore Evaluation software (version 2.0.1) to determine the association rate (on-rate, kon, M−1 s−1 units) and the dissociation rate (off-rate, koff, s−1 units). The equilibrium dissociation constant (KD) was calculated from the relationship KD = koff/kon and is in molar units.
Competitive Binding of Anti-IL-13 mAbs to Recombinant Glycosylated Human IL-13 at 25 °C
Cendakimab and tralokinumab were directly immobilized on separate flow cells of a CM4 chip (Cytiva, BR100050). Sequential injections of human IL-13 (100 nM) and cendakimab, lebrikizumab, tralokinumab or control IgG (5 µg/ml) were made to assess binding. Experiments were conducted in triplicate using a Biacore T200 (Cytiva, Marlborough, MA, USA).
Cell-Based Neutralization Assays
STAT6 Reporter Assay
HEK293 cells transfected with STAT-6 SEAP-Blue reporter (HEK-Blue IL-4/IL-13 cells, InvivoGen, San Diego, CA, USA) were cultured in assay medium (DMEM, 10% FBS, Normocin, Zeocin and Blasticidin). HEK-Blue IL-4/IL-13 cells (300,000/well) were plated into a 96-well plate, which was placed in tissue culture incubator (37 °C, 95% relative humidity, 5% CO2) overnight. Cells were treated with a dose range from 0 to 13.3 nM IL-13 mAbs, IL-4 mAb (R&D Systems, Minneapolis, MN) or isotype control in the presence of 3 ng/ml glycosylated IL-13, 0.3 ng/ml aglycosylated IL-13 or 1 ng/ml IL-4 and placed overnight in tissue culture incubator. Cell supernatant (25 µl) was removed from each well, and AP activity was measured using QUANTI-Blue solution (InvivoGen, San Diego, CA, USA) following the manufacturer’s instructions. Testing was done in triplicate. The testing of the fluorophore conjugated IL-13 and IL-4 was done in a similar manner with the cytokines being tested in triplicate from 0 to 60 ng/ml.
Human Dermal Fibroblast Periostin Secretion Assay
Primary human dermal fibroblast cells (Lonza, Basel, Switzerland) were cultured in supplemented fibroblast growth medium (Lonza). Cells were plated at 7500 cells/well in 96-well tissue culture plate and placed in an overnight tissue culture incubator. The next day, cells were treated with a dose range from 0 to 200 nM IL-13 mAbs or isotype control mAb in the presence of 200 ng/ml glycosylated IL-13 and placed in a tissue culture incubator for 48 h; 100 µl/well of supernatant was collected to measure periostin levels by ELISA (R&D Systems, Minneapolis, MN, USA) according to the manufacturer’s instructions. Testing was done in triplicate.
IL-13Rα2 Internalization Experiments
Human A375 skin melanoma cells and HaCaT (spontaneously transformed keratinocyte cell line from adult human skin) were purchased from ATCC and AddexBio, respectively. The cells were cultured on CellCarrier-96 Ultra microplates (Perkin Elmer, Waltham, MA, USA) or chambered coverglass (ThermoFisher Scientific, Waltham, MA, USA). HaCaT cells were induced to express IL-13Ra2 with 3 days co-treatment of 10 ng/ml IL-4 and 50 ng/ml TNF-alpha. For imaging experiments, confluent cell layers were incubated with 0.1 µg/ml Hoechst 33342 (ThermoFisher Scientific) for nuclear stain and different combinations of 5 µg/ml anti-IL-13Rα2-Alexa Fluor (AF) 488 (R&D Systems, Minneapolis, MN, USA) or 5 µg/ml anti-IL-13Rα1-AF488 (made internally by Eli Lilly) for receptor stain or 500 ng/ml IL-13-AF568 or 500 ng/ml IL-4-AF568 or 7.5 µg/ml lebrikizumab-AF647 or 7.5 µg/ml cendakimab-AF647 or 24.8 µg/ml tralokinumab-AF647 or 7.5 µg/ml isotype control-AF647 for 1 h. Media were replaced and cells were imaged using an Opera Phenix (Perkin Elmer, Waltham, MA, USA) with a 40× water objective or with an LSM880 (Zeiss, Oberkochen, Germany) with a 40× water objective and 1.5× zoom, both at 37 °C, 5% CO2 and humidity. For IL-13/lebrikizumab complex and IL-13/isotype co-localization with Lysoview-488 (Biotium, Fremont, CA), media were replaced with media containing 1:30,000 dilution of Lysoview-AF488, and cells were imaged using an Opera Phenix with 7–11 fields of view every 30 min for 10 h. Co-localizations with Lysoview-AF488 at 7 h post-complex addition to cells from three independent experiments were quantified using Manders’ co-localization coefficients.
Ethics Statement
This study was not a clinical trial and was focused on in vitro experiments, using commercial cell lines. No individual human samples were used in this study. Accordance to the Declaration of Helsinki was not applicable. IRB approval is not done for this type of research.
Discussion
IL-13 is a central pathogenic mediator driving multiple features of AD pathophysiology [
3‐
5], and inhibition of the IL-13 pathway is a target for multiple therapeutic mAbs in AD, including lebrikizumab, tralokinumab and cendakimab [
33,
34]. The molecular characteristics of each of these mAbs likely determine aspects of clinical efficacy in patients with AD. Lebrikizumab binds to both the glycosylated and aglycosylated forms of IL-13 with stronger binding affinity driven by a slower dissociation rate than either tralokinumab or cendakimab. Because the endogenous glycosylation state of IL-13 in humans is not known, we tested the binding of the IL-13 mAbs to both glycosylated and aglycosylated forms of the molecule. Additionally, lebrikizumab demonstrated higher potency in cell-based inhibition assays compared to tralokinumab or cendakimab. This higher potency of lebrikizumab is probably a direct function of the higher binding affinity with slower off-rate, which allows lebrikizumab to sequester IL-13 from the IL-4Rα/IL-13Rα1 receptor complex for a longer period. For the primary cell-based inhibition assay, we utilized IL-13 induced secretion of periostin from dermal fibroblasts. Periostin secretion was selected because of its upregulation with IL-13 stimulation and association with type 2 immunity and AD. Periostin influences tissue remodeling and fibrosis and contributes to itch induction, thus further driving inflammatory processes [
35,
36] and has been shown to be elevated in patients with AD [
37].
The results demonstrate that lebrikizumab binds to IL-13 via a different, non-overlapping epitope than tralokinumab or cendakimab. This difference has important consequences as it allows binding and internalization of the IL-13/lebrikizumab complex to IL-13Rα2, whereas tralokinumab and cendakimab prevent IL-13 binding to IL-13Rα2 providing a mechanistic differentiation from lebrikizumab. IL-13Rα2 can be induced by IL-4 or IL-13 through activation of the IL-4Rα/IL-13Rα1 receptor and is believed to represent a negative regulatory loop of IL-13 in AD [
38]. Results from a clinical trial testing IL-13 mAbs with two different, nonoverlapping epitopes in patients with asthma suggested that epitope specificity may impact the clearance of IL-13 [
39]. Kasaian et al. proposed that IL-13Ra2-mediated IL-13 clearance modulated the IL-13 levels that were observed in that study. Based upon our in vitro observations, we are proposing a similar mechanism is at work when comparing lebrikizumab to tralokinumab and cendakimab. We demonstrate that the internalization of the IL-13/lebrikizumab complex co-localized to lysosomes, suggesting that the internalized IL-13 and lebrikizumab proteins are degraded. Lysosomes dispose of, and recycle, macromolecules, such as proteins, as part of their canonical role in cellular waste clearance [40]. This mechanism for regulation of IL-13 levels is inhibited by tralokinumab and cendakimab and might lead to continued presence of IL-13 in the system, dictated by the binding equilibrium of the mAbs to IL-13.
The differences in molecular characteristics between these IL-13 therapeutic mAbs may help in the understanding of the differences seen in the clinical trial results reported to date. Head-to-head clinical data comparing the efficacy of lebrikizumab to the other IL-13 therapeutic mAbs are not available. However, published data suggest that more patients achieve clinically meaningful outcomes (percent of patients achieving IGA score of 0/1 or EASI75) after 16 weeks of treatment with monotherapy lebrikizumab
[41] versus those treated with tralokinumab
[42]. The differences in AD clinical efficacy between lebrikizumab and tralokinumab are likely due to multiple factors, including different mechanisms of action for IL-13 inhibition, dosing regimens, pharmacokinetics and/or trial patient population. Clinical AD trial results have yet to be published for cendakimab. In our studies, we did not include the activity of dupilumab, a mAb that binds to IL-4Rα and inhibits downstream signaling of the receptor induced by both IL-4 and IL-13
[43] because of the difficulty of making direct comparisons between mAbs binding to receptors or cytokines in in vitro systems. These in vitro systems do not allow for other mechanistic differences that occur during in vivo use such as pharmacokinetic variations and target-mediated drug disposition, which have been reported for dupilumab
[44].
The results document several differences between IL-13 mAbs currently in clinical development. Nonetheless, it is not known if or how these different characteristics translate to the response observed in the clinic; factors such as pharmacokinetic variations, biological complexity or trial patient populations are not recapitulated in the current study. The IL-13/lebrikizumab internalization studies through the IL-13Ra2 receptor were performed using skin-derived cell lines and not primary cells or tissue models and may not reflect the complexity of this mechanism in patients. Furthermore, we did not use clinical grade material antibodies for our studies, as those were not available at the time of our studies; it is unclear whether that impacted our results.
Conclusion
In conclusion, lebrikizumab is an IL-13 mAb with higher binding affinity, slower binding disassociation rate and higher in vitro potency than other IL-13 mAbs, tralokinumab or cendakimab. Additionally, lebrikizumab binds to a different epitope on IL-13 that does not interfere with the natural IL-13 clearance through the IL-13Rα2 compared to tralokinumab and cendakimab. These in vitro results provide evidence for molecular and mechanistic differences among lebrikizumab, tralokinumab and cendakimab, which might translate into differences in clinical efficacy for patients with AD.
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