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Erschienen in: Irish Journal of Medical Science (1971 -) 4/2017

05.05.2017 | Original Article

Circulating rotavirus genotypes in the Irish paediatric population prior to the introduction of the vaccination programme

verfasst von: Z. Yandle, S. Coughlan, R. J. Drew, N. O’Flaherty, J. O’Gorman, C. De Gascun

Erschienen in: Irish Journal of Medical Science (1971 -) | Ausgabe 4/2017

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Abstract

Background

Rotavirus is the leading cause of viral gastroenteritis in children, and it is anticipated that the introduction of the Rotarix™ vaccine (GlaxoSmithKline Biologicals S.A., Rixensart, Belgium) into the Irish immunisation schedule will result in a significant reduction of rotavirus-associated disease. In the pre- and post-vaccination eras, it is important to determine circulating strains of rotavirus to assess vaccine effectiveness, to monitor vaccine failures, and to detect potential emerging strains.

Aim

This study was a collaboration between the Temple Street Children’s University Hospital (TSCUH), Dublin, and the National Virus Reference Laboratory (NVRL), Dublin, to determine the then circulating rotavirus strains in a paediatric hospital.

Method

In the 2015/2016 period (July 2015–June 2016) 89 faecal samples from paediatric patients (53 from TSCUH, 36 from other hospitals) were characterised.

Results

The results showed G1P[8] to be the predominant genotype (57%), followed by G9P[8] (34%), G4P[8] (6%), G2P[4] (2%), and G12P[8] (1%).

Conclusion

This distribution of genotypes is comparable to those found in other European countries prior to vaccination suggesting that the vaccine should be highly efficacious in the Irish population.
Literatur
1.
Zurück zum Zitat Tate JE, Burton AH, Boschi-Pinto C et al (2012) 2008 estimate of worldwide rotavirus-associated mortality in children younger than 5 years before the introduction of universal rotavirus vaccination programmes: a systematic review and meta-analysis. Lancet Infect Dis 12(2):136–141. doi:10.1016/s1473-3099(11)70253-5 CrossRefPubMed Tate JE, Burton AH, Boschi-Pinto C et al (2012) 2008 estimate of worldwide rotavirus-associated mortality in children younger than 5 years before the introduction of universal rotavirus vaccination programmes: a systematic review and meta-analysis. Lancet Infect Dis 12(2):136–141. doi:10.​1016/​s1473-3099(11)70253-5 CrossRefPubMed
2.
Zurück zum Zitat Gautam R, Mijatovic-Rustempasic S, Esona MD et al (2016) One-step multiplex real-time RT-PCR assay for detecting and genotyping wild-type group A rotavirus strains and vaccine strains (Rotarix(R) and RotaTeq(R)) in stool samples. Peer J 4:e1560. doi:10.7717/peerj.1560 CrossRefPubMedPubMedCentral Gautam R, Mijatovic-Rustempasic S, Esona MD et al (2016) One-step multiplex real-time RT-PCR assay for detecting and genotyping wild-type group A rotavirus strains and vaccine strains (Rotarix(R) and RotaTeq(R)) in stool samples. Peer J 4:e1560. doi:10.​7717/​peerj.​1560 CrossRefPubMedPubMedCentral
7.
Zurück zum Zitat Vesikari T, Karvonen A, Prymula R et al (2007) Efficacy of human rotavirus vaccine against rotavirus gastroenteritis during the first two years of life in Europenan infants: randomised, double-blind controlled study. Lancet 370(9601):1757–1763. doi:10.1016/s0140-6736(07)61744-9 CrossRefPubMed Vesikari T, Karvonen A, Prymula R et al (2007) Efficacy of human rotavirus vaccine against rotavirus gastroenteritis during the first two years of life in Europenan infants: randomised, double-blind controlled study. Lancet 370(9601):1757–1763. doi:10.​1016/​s0140-6736(07)61744-9 CrossRefPubMed
9.
Zurück zum Zitat Atchison CJ, Stowe J, Andrews N et al (2016) Rapid declines in age group-specific rotavirus infection and acute gastroenteritis among vaccinated and unvaccinated individuals within 1 year of rotavirus vaccine introduction in England and Wales. The Journal of infectious diseases 213(2):243–249. doi:10.1093/infdis/jiv398 CrossRefPubMed Atchison CJ, Stowe J, Andrews N et al (2016) Rapid declines in age group-specific rotavirus infection and acute gastroenteritis among vaccinated and unvaccinated individuals within 1 year of rotavirus vaccine introduction in England and Wales. The Journal of infectious diseases 213(2):243–249. doi:10.​1093/​infdis/​jiv398 CrossRefPubMed
10.
Zurück zum Zitat Tiemessen CT, Nel MJ (1996) Detection and typing of subgroup F adenoviruses using the polymerase chain reaction. J Virol Methods 59(1–2):73–82CrossRefPubMed Tiemessen CT, Nel MJ (1996) Detection and typing of subgroup F adenoviruses using the polymerase chain reaction. J Virol Methods 59(1–2):73–82CrossRefPubMed
11.
Zurück zum Zitat Kageyama T, Kojima S, Shinohara M et al (2003) Broadly reactive and highly sensitive assay for Norwalk-like viruses based on real-time quantitative reverse transcription-PCR. J Clin Microbiol 41(4):1548–1557CrossRefPubMedPubMedCentral Kageyama T, Kojima S, Shinohara M et al (2003) Broadly reactive and highly sensitive assay for Norwalk-like viruses based on real-time quantitative reverse transcription-PCR. J Clin Microbiol 41(4):1548–1557CrossRefPubMedPubMedCentral
12.
13.
Zurück zum Zitat Freeman MM, Kerin T, Hull J et al (2008) Enhancement of detection and quantification of rotavirus in stool using a modified real-time RT-PCR assay. J Med Virol 80(8):1489–1496. doi:10.1002/jmv.21228 CrossRefPubMed Freeman MM, Kerin T, Hull J et al (2008) Enhancement of detection and quantification of rotavirus in stool using a modified real-time RT-PCR assay. J Med Virol 80(8):1489–1496. doi:10.​1002/​jmv.​21228 CrossRefPubMed
15.
Zurück zum Zitat Manual of rotavirus detection and chracterization methods (2009) WHO Press. Order number WHO/IVB/08.17 Manual of rotavirus detection and chracterization methods (2009) WHO Press. Order number WHO/IVB/08.17
19.
20.
Zurück zum Zitat Collins PJ, Mulherin E, O'Shea H et al (2015) Changing patterns of rotavirus strains circulating in Ireland: re-emergence of G2P[4] and identification of novel genotypes in Ireland. J Med Virol 87(5):764–773. doi:10.1002/jmv.24095 CrossRefPubMed Collins PJ, Mulherin E, O'Shea H et al (2015) Changing patterns of rotavirus strains circulating in Ireland: re-emergence of G2P[4] and identification of novel genotypes in Ireland. J Med Virol 87(5):764–773. doi:10.​1002/​jmv.​24095 CrossRefPubMed
22.
Zurück zum Zitat Brown JR, Shah D, Breuer J (2016) Viral gastrointestinal infections and norovirus genotypes in a paediatric UK hospital, 2014-2015. Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology 84:1–6. doi:10.1016/j.jcv.2016.08.298 CrossRef Brown JR, Shah D, Breuer J (2016) Viral gastrointestinal infections and norovirus genotypes in a paediatric UK hospital, 2014-2015. Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology 84:1–6. doi:10.​1016/​j.​jcv.​2016.​08.​298 CrossRef
Metadaten
Titel
Circulating rotavirus genotypes in the Irish paediatric population prior to the introduction of the vaccination programme
verfasst von
Z. Yandle
S. Coughlan
R. J. Drew
N. O’Flaherty
J. O’Gorman
C. De Gascun
Publikationsdatum
05.05.2017
Verlag
Springer London
Erschienen in
Irish Journal of Medical Science (1971 -) / Ausgabe 4/2017
Print ISSN: 0021-1265
Elektronische ISSN: 1863-4362
DOI
https://doi.org/10.1007/s11845-017-1604-1

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