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03.03.2016 | Annotated Sequence Record

Complete genome analysis of coxsackievirus A24 isolated in Yunnan, China, in 2013

verfasst von: Yilin Zhao, Jiansheng Liu, Haihao Zhang, Chen Guo, Longhui Xia, Fang Yang, Huai Yang, Qinxing Yang, Zhaoqing Yang, Shaohui Ma

Erschienen in: Archives of Virology | Ausgabe 6/2016

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Abstract

Human coxsackievirus A24 (CVA24) belongs to the species Enterovirus C, and variants of this virus frequently cause acute hemorrhagic conjunctivitis (AHC). The complete genome of the K282/YN/CHN/2013 strain, isolated from a healthy child in Yunnan, China, in 2013, is reported here for the first time. The strain showed 80.0 % and 79.9 % nucleotide sequence identity to CVA24 prototype strain Joseph and CVA24 variant prototype EH24, respectively. The K282/YN/CHN/2013 strain belongs to the CVA24 serotype. Twelve amino acid differences, most of which are in structural regions, were found between the CVA24 and CVA24v strains. In the whole-length genome sequence, only the structural region of K282/YN/CHN/2013 was similar to that of the CVA24 strains; the other genome regions were more similar to those of other members of the species Enterovirus C. Recombination analysis showed evidence of recombination with other viruses of the same species.

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Titel: Complete genome analysis of coxsackievirus A24 isolated in Yunnan, China, in 2013
verfasst von: Yilin Zhao
Jiansheng Liu
Haihao Zhang
Chen Guo
Longhui Xia
Fang Yang
Huai Yang
Qinxing Yang
Zhaoqing Yang
Shaohui Ma
Publikationsdatum: 03.03.2016
Verlag: Springer Vienna
Erschienen in: Archives of Virology / Ausgabe 6/2016
Print ISSN: 0304-8608
Elektronische ISSN: 1432-8798
DOI: https://doi.org/10.1007/s00705-016-2792-0

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Complete genome analysis of coxsackievirus A24 isolated in Yunnan, China, in 2013

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