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07.12.2017 | Annotated Sequence Record

Complete genome sequence of a new strain of Lagenaria siceraria endornavirus from China

verfasst von: Xiaoqin Peng, Hui Pan, Arif Muhammad, Hongliu An, Shouguo Fang, Weimin Li, Songbai Zhang

Erschienen in: Archives of Virology | Ausgabe 3/2018

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Abstract

An RNA virus tentatively named Lagenaria siceraria endornavirus-Hubei (LsEV-HuB) was isolated from Lagenaria siceraria var. hispida in Hubei, China. The LsEV-HuB genome consists of 15,098 bp and contains a single open reading frame (ORF) encoding a large protein with several conserved domains, including one helicase domain, one glycosyltransferase domain, two capsular polysaccharide synthesis protein (CPS) domains, and one RNA-dependent RNA polymerase (RdRp) domain. LsEV-HuB has nucleotide and amino acid sequence identities of 72.96% and 77.95%, respectively, to Lagenaria siceraria endornavirus-California (LsEV-CA), the closest relative of LsEV-HuB.

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Titel: Complete genome sequence of a new strain of Lagenaria siceraria endornavirus from China
verfasst von: Xiaoqin Peng
Hui Pan
Arif Muhammad
Hongliu An
Shouguo Fang
Weimin Li
Songbai Zhang
Publikationsdatum: 07.12.2017
Verlag: Springer Vienna
Erschienen in: Archives of Virology / Ausgabe 3/2018
Print ISSN: 0304-8608
Elektronische ISSN: 1432-8798
DOI: https://doi.org/10.1007/s00705-017-3664-y

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Complete genome sequence of a new strain of Lagenaria siceraria endornavirus from China

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