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Erschienen in: Journal of Digital Imaging 6/2012

01.12.2012

Content-Based Retrieval of Focal Liver Lesions Using Bag-of-Visual-Words Representations of Single- and Multiphase Contrast-Enhanced CT Images

verfasst von: Wei Yang, Zhentai Lu, Mei Yu, Meiyan Huang, Qianjin Feng, Wufan Chen

Erschienen in: Journal of Imaging Informatics in Medicine | Ausgabe 6/2012

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Abstract

This paper is aimed at developing and evaluating a content-based retrieval method for contrast-enhanced liver computed tomographic (CT) images using bag-of-visual-words (BoW) representations of single and multiple phases. The BoW histograms are extracted using the raw intensity as local patch descriptor for each enhance phase by densely sampling the image patches within the liver lesion regions. The distance metric learning algorithms are employed to obtain the semantic similarity on the Hellinger kernel feature map of the BoW histograms. The different visual vocabularies for BoW and learned distance metrics are evaluated in a contrast-enhanced CT image dataset comprised of 189 patients with three types of focal liver lesions, including 87 hepatomas, 62 cysts, and 60 hemangiomas. For each single enhance phase, the mean of average precision (mAP) of BoW representations for retrieval can reach above 90 % which is significantly higher than that of intensity histogram and Gabor filters. Furthermore, the combined BoW representations of the three enhance phases can improve mAP to 94.5 %. These preliminary results demonstrate that the BoW representation is effective and feasible for retrieval of liver lesions in contrast-enhanced CT images.
Literatur
1.
Zurück zum Zitat Müller H, Michoux N, Bandon D, Geissbuhler A: A review of content-based image retrieval systems in medical applications–clinical benefits and future directions. Int J Med Informatics 73(1):1–23, 2004CrossRef Müller H, Michoux N, Bandon D, Geissbuhler A: A review of content-based image retrieval systems in medical applications–clinical benefits and future directions. Int J Med Informatics 73(1):1–23, 2004CrossRef
2.
Zurück zum Zitat Chen EL, Chung PC, Chen CL, Tsai HM, Chang CI: An automatic diagnostic system for CT liver image classification. IEEE Trans Biomed Eng 45(6):783–794, 1998PubMedCrossRef Chen EL, Chung PC, Chen CL, Tsai HM, Chang CI: An automatic diagnostic system for CT liver image classification. IEEE Trans Biomed Eng 45(6):783–794, 1998PubMedCrossRef
3.
Zurück zum Zitat Gletsos M, Mougiakakou SG, Matsopoulos GK, Nikita KS, Nikita AS, Kelekis D: A computer-aided diagnostic system to characterize CT focal liver lesions: design and optimization of a neural network classifier. IEEE Trans Info Tech Biomed 7(3):153–162, 2003CrossRef Gletsos M, Mougiakakou SG, Matsopoulos GK, Nikita KS, Nikita AS, Kelekis D: A computer-aided diagnostic system to characterize CT focal liver lesions: design and optimization of a neural network classifier. IEEE Trans Info Tech Biomed 7(3):153–162, 2003CrossRef
4.
Zurück zum Zitat Bilello M, Gokturk SB, Desser T, Napel S, Jeffrey Jr, RB, Beaulieu CF: Automatic detection and classification of hypodense hepatic lesions on contrast-enhanced venous-phase CT. Med Phys 31(9):2584–2593, 2004PubMedCrossRef Bilello M, Gokturk SB, Desser T, Napel S, Jeffrey Jr, RB, Beaulieu CF: Automatic detection and classification of hypodense hepatic lesions on contrast-enhanced venous-phase CT. Med Phys 31(9):2584–2593, 2004PubMedCrossRef
5.
Zurück zum Zitat Mougiakakou SG, Valavanis IK, Nikita A, Nikita KS: Differential diagnosis of CT focal liver lesions using texture features, feature selection and ensemble driven classifiers. Artif Intell Med 41(1):25–37, 2007PubMedCrossRef Mougiakakou SG, Valavanis IK, Nikita A, Nikita KS: Differential diagnosis of CT focal liver lesions using texture features, feature selection and ensemble driven classifiers. Artif Intell Med 41(1):25–37, 2007PubMedCrossRef
6.
Zurück zum Zitat Napel SA, et al: Automated retrieval of CT images of liver lesions on the basis of image similarity: method and preliminary results. Radiology 256(1):243–252, 2010PubMedCrossRef Napel SA, et al: Automated retrieval of CT images of liver lesions on the basis of image similarity: method and preliminary results. Radiology 256(1):243–252, 2010PubMedCrossRef
7.
Zurück zum Zitat Ye J, Sun Y, Wang S, Gu L, Qian L, Xu J: Multi-phase CT image based hepatic lesion diagnosis by SVM. In the 2nd International Conference on Biomedical Engineering and Informatics 2009 Ye J, Sun Y, Wang S, Gu L, Qian L, Xu J: Multi-phase CT image based hepatic lesion diagnosis by SVM. In the 2nd International Conference on Biomedical Engineering and Informatics 2009
8.
Zurück zum Zitat Nino-Murcia M, Olcott EW, Jeffrey RB, Lamm RL, Beaulieu CF, Jain KA: Focal liver lesions: pattern-based classification scheme for enhancement at arterial phase CT. Radiology 215(3):746–751, 2000PubMed Nino-Murcia M, Olcott EW, Jeffrey RB, Lamm RL, Beaulieu CF, Jain KA: Focal liver lesions: pattern-based classification scheme for enhancement at arterial phase CT. Radiology 215(3):746–751, 2000PubMed
9.
Zurück zum Zitat Akgül C, Rubin D, Napel S, Beaulieu C, Greenspan H, Acar B: Content-based image retrieval in radiology: current status and future directions. J Digit Imaging 24(2):202–222, 2011CrossRef Akgül C, Rubin D, Napel S, Beaulieu C, Greenspan H, Acar B: Content-based image retrieval in radiology: current status and future directions. J Digit Imaging 24(2):202–222, 2011CrossRef
10.
Zurück zum Zitat Zhao CG, Cheng HY, Huo YL, Zhuang TG: Liver CT-image retrieval based on Gabor texture. In EMBS, 2004 Zhao CG, Cheng HY, Huo YL, Zhuang TG: Liver CT-image retrieval based on Gabor texture. In EMBS, 2004
11.
Zurück zum Zitat Lee C-C, Chen S-H, Tsai H-M, Chung P-C, Chiang Y-C: Discrimination of liver diseases from CT images based on Gabor filters. In the 19th IEEE Symposium on Computer-Based Medical Systems, 2006 Lee C-C, Chen S-H, Tsai H-M, Chung P-C, Chiang Y-C: Discrimination of liver diseases from CT images based on Gabor filters. In the 19th IEEE Symposium on Computer-Based Medical Systems, 2006
12.
Zurück zum Zitat El-Gendy MM, El-Zahraa Bou-Chadi F: An automated system for classifying computed tomographic liver images. In National Radio Science Conference, 2009 El-Gendy MM, El-Zahraa Bou-Chadi F: An automated system for classifying computed tomographic liver images. In National Radio Science Conference, 2009
13.
Zurück zum Zitat Varma M, Zisserman A: A statistical approach to texture classification from single images. Int J Comput Vis 62(1):61–81, 2005 Varma M, Zisserman A: A statistical approach to texture classification from single images. Int J Comput Vis 62(1):61–81, 2005
14.
Zurück zum Zitat Manik V, Andrew Z: A statistical approach to material classification using image patch exemplars. IEEE Trans Pattern Anal Mach Intell 31(11):2032–2047, 2009CrossRef Manik V, Andrew Z: A statistical approach to material classification using image patch exemplars. IEEE Trans Pattern Anal Mach Intell 31(11):2032–2047, 2009CrossRef
15.
Zurück zum Zitat Li F-F, Perona P: A bayesian hierarchical model for learning natural scene categories. In IEEE Conference on Computer Vision and Pattern Recognition, 2005 Li F-F, Perona P: A bayesian hierarchical model for learning natural scene categories. In IEEE Conference on Computer Vision and Pattern Recognition, 2005
16.
Zurück zum Zitat Winn J, Criminisi A, Minka T: Object categorization by learned universal visual dictionary. In International Conference on Computer Vision, 2005 Winn J, Criminisi A, Minka T: Object categorization by learned universal visual dictionary. In International Conference on Computer Vision, 2005
17.
Zurück zum Zitat Florent P: Universal and adapted vocabularies for generic visual categorization. IEEE Trans Pattern Anal Mach Intell 30(7):1243–1256, 2008CrossRef Florent P: Universal and adapted vocabularies for generic visual categorization. IEEE Trans Pattern Anal Mach Intell 30(7):1243–1256, 2008CrossRef
18.
Zurück zum Zitat van Gemert JC, Snoek CGM, Veenman CJ, Smeulders AWM, Geusebroek J-M: Comparing compact codebooks for visual categorization. Computer Vision and Image Understanding 114(4):450–462, 2010CrossRef van Gemert JC, Snoek CGM, Veenman CJ, Smeulders AWM, Geusebroek J-M: Comparing compact codebooks for visual categorization. Computer Vision and Image Understanding 114(4):450–462, 2010CrossRef
19.
Zurück zum Zitat Jégou H, Douze M, Schmid C: Improving bag-of-features for large scale image search. Int J Comput Vis 87(3):316–336, 2011CrossRef Jégou H, Douze M, Schmid C: Improving bag-of-features for large scale image search. Int J Comput Vis 87(3):316–336, 2011CrossRef
20.
Zurück zum Zitat Avni U, Greenspan H, Sharon M, Konen E, Goldberger J: X-ray image categorization and retrieval using patch-based visual words representation. In the Sixth IEEE International Conference on Symposium on Biomedical Imaging, 2009 Avni U, Greenspan H, Sharon M, Konen E, Goldberger J: X-ray image categorization and retrieval using patch-based visual words representation. In the Sixth IEEE International Conference on Symposium on Biomedical Imaging, 2009
21.
Zurück zum Zitat Deserno T, Antani S, Long R: Ontology of gaps in content-based image retrieval. J Digit Imaging 22(2):202–215, 2009PubMedCrossRef Deserno T, Antani S, Long R: Ontology of gaps in content-based image retrieval. J Digit Imaging 22(2):202–215, 2009PubMedCrossRef
22.
Zurück zum Zitat van Gemert JC, Veenman CJ, Smeulders AWM, Geusebroek J-M: Visual Word Ambiguity. IEEE Trans Pattern Anal Mach Intell 32(7):1271–1283, 2009CrossRef van Gemert JC, Veenman CJ, Smeulders AWM, Geusebroek J-M: Visual Word Ambiguity. IEEE Trans Pattern Anal Mach Intell 32(7):1271–1283, 2009CrossRef
23.
Zurück zum Zitat Lowe DG: Distinctive image features from scale-Invariant keypoints. Int J Comput Vis 60(2):91–110, 2004CrossRef Lowe DG: Distinctive image features from scale-Invariant keypoints. Int J Comput Vis 60(2):91–110, 2004CrossRef
24.
Zurück zum Zitat Coates A, Lee H, Ng AY: An analysis of single-layer networks in unsupervised feature learning. In the 14th International Conference on Artificial Intelligence and Statistics (AISTATS), 2011 Coates A, Lee H, Ng AY: An analysis of single-layer networks in unsupervised feature learning. In the 14th International Conference on Artificial Intelligence and Statistics (AISTATS), 2011
25.
Zurück zum Zitat Wojcikiewicz W, Binder A, Kawanabe M: Enhancing image classification with class-wise clustered vocabularies. In the 20th International Conference on Pattern Recognition, 2010 Wojcikiewicz W, Binder A, Kawanabe M: Enhancing image classification with class-wise clustered vocabularies. In the 20th International Conference on Pattern Recognition, 2010
26.
Zurück zum Zitat Wang J, Yang J, Yu K, Lv F, Huang T, Gong Y: Locality-constrained Linear Coding for Image Classification. In IEEE Conference on Computer Vision and Pattern Recognition, 2010 Wang J, Yang J, Yu K, Lv F, Huang T, Gong Y: Locality-constrained Linear Coding for Image Classification. In IEEE Conference on Computer Vision and Pattern Recognition, 2010
27.
Zurück zum Zitat Chang H, Yeung D-Y: Kernel-based distance metric learning for content-based image retrieval. Image and Vision Computing 25(5):695–703, 2007CrossRef Chang H, Yeung D-Y: Kernel-based distance metric learning for content-based image retrieval. Image and Vision Computing 25(5):695–703, 2007CrossRef
28.
Zurück zum Zitat Masashi S: Dimensionality reduction of multimodal labeled data by local Fisher discriminant analysis. J Mach Learn Res 8:1027–1061, 2007 Masashi S: Dimensionality reduction of multimodal labeled data by local Fisher discriminant analysis. J Mach Learn Res 8:1027–1061, 2007
29.
Zurück zum Zitat Xing EP, Ng AY, Jordan MI, Russell SJ: Distance metric learning with application to clustering with side-information. In Conference on Neural Information Processing Systems (NIPS), 2002 Xing EP, Ng AY, Jordan MI, Russell SJ: Distance metric learning with application to clustering with side-information. In Conference on Neural Information Processing Systems (NIPS), 2002
30.
Zurück zum Zitat Weinberger KQ, Saul LK: Distance metric learning for large margin nearest neighbor classification. J Mach Learn Res 10:207–244, 2009 Weinberger KQ, Saul LK: Distance metric learning for large margin nearest neighbor classification. J Mach Learn Res 10:207–244, 2009
31.
Zurück zum Zitat Alipanahi B, Biggs M, Ghodsi A: Distance metric learning vs. Fisher discriminant analysis. In the 23rd national conference on Artificial intelligence, 2008 Alipanahi B, Biggs M, Ghodsi A: Distance metric learning vs. Fisher discriminant analysis. In the 23rd national conference on Artificial intelligence, 2008
32.
Zurück zum Zitat Zhang Z, Dai G, Xu C, Jordan MI: Regularized discriminant analysis, ridge regression and beyond. J Mach Learn Res 11(3):2199–2228, 2010 Zhang Z, Dai G, Xu C, Jordan MI: Regularized discriminant analysis, ridge regression and beyond. J Mach Learn Res 11(3):2199–2228, 2010
33.
Zurück zum Zitat Perronnin F, Senchez J, Xerox Y: Large-scale image categorization with explicit data embedding. In IEEE Conference on Computer Vision and Pattern Recognition, 2010 Perronnin F, Senchez J, Xerox Y: Large-scale image categorization with explicit data embedding. In IEEE Conference on Computer Vision and Pattern Recognition, 2010
34.
Zurück zum Zitat Vedaldi A, Zisserman A: Efficient additive kernels via explicit feature maps. In IEEE Conference on Computer Vision and Pattern Recognition, 2010 Vedaldi A, Zisserman A: Efficient additive kernels via explicit feature maps. In IEEE Conference on Computer Vision and Pattern Recognition, 2010
35.
Zurück zum Zitat Manjunath BS, Ma WY: Texture features for browsing and retrieval of image data. IEEE Trans Pattern Anal Mach Intell 18(8):837–842, 1996CrossRef Manjunath BS, Ma WY: Texture features for browsing and retrieval of image data. IEEE Trans Pattern Anal Mach Intell 18(8):837–842, 1996CrossRef
Metadaten
Titel
Content-Based Retrieval of Focal Liver Lesions Using Bag-of-Visual-Words Representations of Single- and Multiphase Contrast-Enhanced CT Images
verfasst von
Wei Yang
Zhentai Lu
Mei Yu
Meiyan Huang
Qianjin Feng
Wufan Chen
Publikationsdatum
01.12.2012
Verlag
Springer-Verlag
Erschienen in
Journal of Imaging Informatics in Medicine / Ausgabe 6/2012
Print ISSN: 2948-2925
Elektronische ISSN: 2948-2933
DOI
https://doi.org/10.1007/s10278-012-9495-1

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