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BMC Infectious Diseases

Ausgabe 1/2019

Inhalt (1075 Artikel)

Open Access Research article

Laboratory evaluation of four HIV/syphilis rapid diagnostic tests

Annelies Van Den Heuvel, Hilde Smet, Irena Prat, Anita Sands, Willy Urassa, Katrien Fransen, Tania Crucitti

Open Access Research article

Revisiting area risk classification of visceral leishmaniasis in Brazil

Gustavo Machado, Julio Alvarez, Haakon Christopher Bakka, Andres Perez, Lucas Edel Donato, Francisco Edilson de Ferreira Lima Júnior, Renato Vieira Alves, Victor Javier Del Rio Vilas

Open Access Research article

Epidemiological description of a protracted cholera outbreak in Tonj East and Tonj North counties, former Warrap State, South Sudan, May-Oct 2017

Fred Nsubuga, Stephen Chol Garang, Mathew Tut, David Oguttu, Robert Lubajo, Dennis Lodiongo, Michael Lasuba, Allan Mpairwe

Open Access Case report

CRYPTOCOCCAL meningitis in a HIV negative newly diagnosed diabetic patient: a CASE report

Odhiambo Henry Owuor, Patrick Chege

Open Access Research article

Comparison of an in-house real-time duplex PCR assay with commercial HOLOGIC® APTIMA assays for the detection of Neisseria gonorrhoeae and Chlamydia trachomatis in urine and extra-genital specimens

Johanna M. E. Venter, Precious M. Mahlangu, Etienne E. Müller, David A. Lewis, Kevin Rebe, Helen Struthers, James McIntyre, Ranmini S. Kularatne

Open Access Research article

Viral load detection and management on first line ART in rural Rwanda

Jean de Dieu Ndagijimana Ntwali, Tom Decroo, Muhayimpundu Ribakare, Athanase Kiromera, Placidie Mugwaneza, Sabin Nsanzimana, Lutgarde Lynen

Open Access Research article

Mortality in hospitalized patients with tuberculous meningitis

Jaime Soria, Tatiana Metcalf, Nicanor Mori, Renee E. Newby, Silvia M. Montano, Luz Huaroto, Eduardo Ticona, Joseph R. Zunt

Open Access Research article

Clinical characteristics of HIV-1-infected patients with high levels of plasma interferon-γ: a multicenter observational study

Dai Watanabe, Tomoko Uehira, Sachiko Suzuki, Erina Matsumoto, Takashi Ueji, Kazuyuki Hirota, Rumi Minami, Soichiro Takahama, Kimikazu Hayashi, Morio Sawamura, Masahiro Yamamoto, Takuma Shirasaka

Open Access Research article

Estimating the burden of care home gastroenteritis outbreaks in England, 2014–2016

Thomas Inns, Helen E. Clough, John P. Harris, Roberto Vivancos, Natalie Adams, Sarah J. O’Brien

Open Access Research article

Epidemiology survey of infectious diseases in North Korean travelers, 2015–2017

Pengyu Han, Yanxia Teng, Xiuxin Bi, Jinge Li, Dianxing Sun

Open Access Research article

Subclinical tuberculosis among adults with HIV: clinical features and outcomes in a South African cohort

Kristina L. Bajema, Ingrid V. Bassett, Sharon M. Coleman, Douglas Ross, Kenneth A. Freedberg, Anna Wald, Paul K. Drain

Open Access Case report

Young patient with hantavirus-induced myocarditis detected by comprehensive cardiac magnetic resonance assessment

Patrick Krumm, Tanja Zitzelsberger, Meinrad Gawaz, Simon Greulich

Open Access Research article

Focus of infection and microbiological etiology in community-acquired infections in hospitalized adult patients in the Faroe Islands

Marija Todorovic Markovic, Court Pedersen, Magnús Gottfredsson, Mirjana Todorovic Mitic, Shahin Gaini

Open Access Research article

Cardiac events after macrolides or fluoroquinolones in patients hospitalized for community-acquired pneumonia: post-hoc analysis of a cluster-randomized trial

Douwe F. Postma, Cristian Spitoni, Cornelis H. van Werkhoven, Leontine J. R. van Elden, Jan Jelrik Oosterheert, Marc J. M. Bonten

Open Access Research article

Time delay and associated mortality from negative smear to positive Xpert MTB/RIF test among TB/HIV patients: a retrospective study

Miguelhete Lisboa, Inês Fronteira, Estefano Colove, Marques Nhamonga, Maria do Rosário O. Martins

Open Access Research article

Epidemic pattern of hand-foot-and-mouth disease in Xi’an, China from 2008 through 2015

JiFeng Liu, XiaoMei Xiang, ZhongShu Pu, Yong Long, Dan Xiao, WeiLu Zhang, Qian Li, XiTong Li, SiYao Li, ZhongJun Shao, XiaoLi Yang, YongMin Xiong

Open Access Case report

Klebsiella pneumoniae carbapenemase (KPC)-producing Klebsiella pneumoniae ST258 isolated from a Japanese patient without a history of foreign travel - a new public health concern in Japan: a case report

Yusuke Ainoda, Kotaro Aoki, Yoshikazu Ishii, Kentaro Okuda, Hitomi Furukawa, Ryo Manabe, Toshinori Sahara, Fukumi Nakamura-Uchiyama, Hitomi Kurosu, Yukiko Ando, Maki Fujisawa, Hitomi Hoshino, Hideki Arima, Kenji Ohnishi

Open Access Research article

Routine HIV testing program in the University Infectious Diseases Centre in Lithuania: a four-year analysis

Raimonda Matulionytė, Kęstutis Žagminas, Eglė Balčiūnaitė, Elžbieta Matulytė, Rasutė Paulauskienė, Almina Bajoriūnienė, Arvydas Ambrozaitis

Open Access Research article

Performance of serological tests PGL1 and NDO-LID in the diagnosis of leprosy in a reference Center in Brazil

André Luiz Leturiondo, Ariani Batista Noronha, Monik Oney Oliveira do Nascimento, Cynthia de Oliveira Ferreira, Fabíola da Costa Rodrigues, Milton Ozório Moraes, Carolina Talhari

Open Access Research article

Diversity of upper respiratory tract infections and prevalence of Streptococcus pneumoniae colonization among patients with fever and flu-like symptoms

Jialiang Tang, Jinkun Chen, Tingting He, Zhuojing Jiang, Jiale Zhou, Bin Hu, Shangxin Yang

Open Access Research article

Evaluation of point of care tests for the diagnosis of cutaneous leishmaniasis in Suriname

Henk D. F. H. Schallig, Ricardo V. P. Hu, Alida D. Kent, Merlin van Loenen, Sandra Menting, Albert Picado, Zippora Oosterling, Israel Cruz

Open Access Research article

Mycobacterium tuberculosis transmission in an ethnically-diverse high incidence region in England, 2007–11

Emilia Vynnycky, Adrienne R. Keen, Jason T. Evans, Shaina Khanom, Peter M. Hawkey, Richard G. White, Ibrahim Abubakar

Open Access Research article

Prevalence and incidence of genital warts and cervical Human Papillomavirus infections in Nigerian women

Eileen O. Dareng, Sally N. Adebamowo, Ayotunde Famooto, Oluwatoyosi Olawande, Michael K. Odutola, Yinka Olaniyan, Richard A. Offiong, Paul P. Pharoah, Clement A. Adebamowo

Open Access Research article

Healthcare-associated infections: bacteriological characterization of the hospital surfaces in the University Hospital of Abomey-Calavi/so-ava in South Benin (West Africa)

F. Cyr Doscoph Afle, Alidéhou Jerrold Agbankpe, Roch Christian Johnson, Olivia Houngbégnon, Sègbè Christophe Houssou, Honoré Sourou Bankole

Open Access Research article

Carriage rates and risk factors during an outbreak of invasive meningococcal disease due to Neisseria meningitidis serogroup C ST-11 (cc11) in Tuscany, Italy: a cross-sectional study

Alessandro Miglietta, Francesco Innocenti, Patrizio Pezzotti, Eleonora Riccobono, Maria Moriondo, Patrizia Pecile, Francesco Nieddu, Gian Maria Rossolini, Chiara Azzari, Alessandra Bagnoli, Giuseppe Boncompagni, Francesco Cirpiani, Paolo Filidei, Giorgio Garofalo, Marinella Chiti, Gabriele Mazzoni, Astrid Mercone, Giovanna Mereu, Sabrina Novelli, Maria Grazia Santini, Maurizio Spagnesi, Emanuela Balocchini, Giovanni Rezza, Fabio Voller, Paola Stefanelli

Open Access Research article

Helicobacter pylori infection among patients presenting with dyspepsia at a primary care setting in Cameroon: seroprevalence, five-year trend and predictors

Jeannine A. Aminde, Guisilla A. Dedino, Calypse A. Ngwasiri, Kingsley S. Ombaku, Cedric A. Mahop Makon, Leopold Ndemnge Aminde

Open Access Research article

Chlamydia trachomatis screening in urine among asymptomatic men attending an STI clinic in Paris: a cross-sectional study

Paul Rondeau, Nadia Valin, Dominique Decré, Pierre-Marie Girard, Karine Lacombe, Laure Surgers

Open Access Research article

Clinical characteristics and viral etiologies of outpatients with acute respiratory infections in Huzhou of China: a retrospective study

Xiaohong Wen, Qiuling Huang, Hong Tao, Weihua Zou, Min Gao, Huihui Guo, Xing Yao, Dawei Cui, Xiang Wang

Open Access Case report

Clonorchiasis sinensis detected by laparoscopic exploration of biliary tracts in two patients with obstructive jaundice

Xialei Liu, Genglong Zhu, Chaonong Cai, Zhiyue Lv, Jian Li

Open Access Case report

Severe systemic cytomegalovirus infection in an immunocompetent patient outside the intensive care unit: a case report

Giovanni Carpani, Sergio Foresti, Raffaella Dell’Oro, Guido Grassi, Michele Bombelli

Open Access Research article

Regional outbreak of community-associated methicillin-resistant Staphylococcus aureus ST834 in Japanese children

Yuki Uehara, Takashi Sasaki, Tadashi Baba, Yujie Lu, Eri Imajo, Yuka Sato, Shigeru Tanno, Munehiro Furuichi, Miki Kawada, Keiichi Hiramatsu

Open Access Research article

Human adenovirus type 7 infection causes a more severe disease than type 3

Yangxi Fu, Zhengzhen Tang, Zhixu Ye, Shi Mo, Xingui Tian, Ke Ni, Luo Ren, Enmei Liu, Na Zang

Open Access Case report

Severe chest allodynia as an unusual first presentation of hydatid disease: a case report

Flaminia Coluzzi, Roberto Luca Meniconi, Damiano Caruso, Flaminia Rivosecchi, Linda Petrone, Delia Goletti, Giuseppe Maria Ettorre

Open Access Research article

Effect of laminar air flow and building construction on aspergillosis in acute leukemia patients: a retrospective cohort study

Makoto Iwasaki, Junya Kanda, Masakatsu Hishizawa, Toshiyuki Kitano, Tadakazu Kondo, Kouhei Yamashita, Akifumi Takaori-Kondo

Open Access Research article

Bovine tuberculosis in eastern Ethiopia: prevalence, risk factors and its public health importance

Jelalu Kemal, Berhanu Sibhat, Aklilu Abraham, Yitagele Terefe, Ketema Tafess Tulu, Kiros Welay, Nejib Getahun

Open Access Case report

Influenza B virus infection complicated by life-threatening pericarditis: a unique case-report and literature review

Silvia Spoto, Emanuele Valeriani, Luciana Locorriere, Giuseppina Beretta Anguissola, Angelo Lauria Pantano, Francesca Terracciani, Elisabetta Riva, Massimo Ciccozzi, Sebastiano Costantino, Silvia Angeletti

Open Access Research article

Cost of three models of care for drug-resistant tuberculosis patients in Nigeria

Florence O. Bada, Evaezi Okpokoro, Nick Blok, Emmanuel Meribole, Saswata Dutt, Patrick Dakum, Alash’le Abimiku, Alice Zwerling, Sandra V. Kik

Open Access Research article

Influenza infections in Australia 2009–2015: is there a combined effect of age and sex on susceptibility to virus subtypes?

Kam Cheong Wong, Georgina M. Luscombe, Catherine Hawke

Open Access Research article

Common uropathogens and their antibiotic susceptibility pattern among diabetic patients

Hiwot Ketema Woldemariam, Dereje Assefa Geleta, Kassu Desta Tulu, Negga Asamene Aber, Melese Hailu Legese, Genet Molla Fenta, Ibrahim Ali

Open Access Research article

Biofilm production by Haemophilus influenzae and Streptococcus pneumoniae isolated from the nasopharynx of children with acute otitis media

Quentin Vermee, Robert Cohen, Constantin Hays, Emmanuelle Varon, Stephane Bonacorsi, Stephane Bechet, Franck Thollot, François Corrard, Claire Poyart, Corinne Levy, Josette Raymond

Open Access Research article

Using clinical practice guidelines to manage dengue: a qualitative study in a Malaysian hospital

Alexandra Wharton-Smith, Judith Green, Ee Chin Loh, Alexander Gorrie, Sharifah Faridah Syed Omar, Loraine Bacchus, Lucy Chai See Lum

Open Access Research article

Prevalence, genotype and antimicrobial resistance of Clostridium difficile isolates from healthy pets in Eastern China

Yanxia Wei, Mingchuang Sun, Yuhan Zhang, Jing Gao, Fanyun Kong, Dianbin Liu, Hao Yu, Jinxin Du, Renxian Tang

Open Access Research article

Rates of hospitalization and death for all-cause and rotavirus acute gastroenteritis before rotavirus vaccine introduction in Kenya, 2010–2013

Richard Omore, Sammy Khagayi, Billy Ogwel, Reuben Onkoba, John B. Ochieng, Jane Juma, Stephen Munga, Collins Tabu, Sergon Kibet, J. Pekka Nuorti, Frank Odhiambo, Jason M. Mwenda, Robert F. Breiman, Umesh D. Parashar, Jacqueline E. Tate

Open Access Research article

Clostridium difficile infections in teaching hospital in northern Finland

M. Marttila-Vaara, P. Ylipalosaari, H. Kauma

Open Access Case report

Multimodal therapy and twenty years of valid management of a patient with chronic hepatitis B in a less developed Western Region in China---case report and review of the literature

Yue-Rong Zhang, De-Ming Wu, Xiong-Chang Liu, Ning Zhou, Chang-Chun Cao, Wu-Hua Liu, Chun-Xia Wang, Hui Wang

Open Access Research article

Prolonged oral vancomycin for secondary prophylaxis of relapsing Clostridium difficile infection

Kevin Zhang, Patricia Beckett, Salaheddin Abouanaser, Vida Stankus, Christine Lee, Marek Smieja

Open Access Research article

Transcription factors STAT-4, STAT-6 and CREB regulate Th1/Th2 response in leprosy patients: effect of M. leprae antigens

Rajni Upadhyay, Bhavyata Dua, Bhawna Sharma, Mohan Natrajan, Ajai Kumar Jain, Balaji Kithiganahalli Narayanaswamy, Beenu Joshi

Open Access Research article

Viral species richness and composition in young children with loose or watery stool in Ethiopia

Kristen Aiemjoy, Eda Altan, Solomon Aragie, Dionna M. Fry, Tung G. Phan, Xutao Deng, Melsew Chanyalew, Zerihun Tadesse, E. Kelly Callahan, Eric Delwart, Jeremy D. Keenan

Open Access Research article

Influence of subinhibitory antifungal concentrations on extracellular hydrolases and biofilm production by Candida albicans recovered from Egyptian patients

Houdaii H. El-Houssaini, Omnia M. Elnabawy, Hebatallah A. Nasser, Walid F. Elkhatib

Open Access Research article

Pleural IFN-γ release assay combined with biomarkers distinguished effectively tuberculosis from malignant pleural effusion

Yimin Tang, Juanjuan Zhang, Huarong Huang, Xing He, Jiaohong Zhang, Min Ou, Guobao Li, Changchun Zeng, Taosheng Ye, Lili Ren, Yingxia Liu, Guoliang Zhang

Open Access Research article

TLR9 polymorphism correlates with immune activation, CD4 decline and plasma IP10 levels in HIV patients

Anjali Joshi, Erin B. Punke, Tugba Mehmetoglu-Gurbuz, Diego P. Peralta, Himanshu Garg

Open Access Case report

Reactivation of resolved hepatitis B virus infection combined with nephrotic syndrome in a patient after allogeneic haematopoietic stem cell transplantation

Jing-Wen Zhang, Xiang-Zhong Zhang, Yan-Ling Sun, Bing Long, Xiao-Zhen Wang, Xu-Dong Li

Open Access Case report

A case report of an atypical presentation of pyogenic iliopsoas abscess

Bang Yu Xu, Farhad Fakhrudin Vasanwala, Sher Guan Low

Open Access Research article

Efficacy and tolerability of lamivudine plus dolutegravir compared with lamivudine plus boosted PIs in HIV-1 positive individuals with virologic suppression: a retrospective study from the clinical practice

Alberto Borghetti, Francesca Lombardi, Roberta Gagliardini, Gianmaria Baldin, Arturo Ciccullo, Davide Moschese, Arianna Emiliozzi, Simone Belmonti, Silvia Lamonica, Francesca Montagnani, Elena Visconti, Andrea De Luca, Simona Di Giambenedetto

Open Access Research article

Missed pulmonary tuberculosis: a cross sectional study in the general medical inpatient wards of a large referral hospital in Ethiopia

Dawit Assefa, Feleke Belachew, Getachew Wondimagegn, Eveline Klinkenberg

Open Access Research article

Effect of isoniazid preventive therapy on tuberculosis incidence and associated risk factors among HIV infected adults in Tanzania: a retrospective cohort study

Amon Sabasaba, Henry Mwambi, Geoffrey Somi, Angella Ramadhani, Michael J. Mahande

Open Access Research article

Molecular mechanisms of azole resistance in Candida bloodstream isolates

Jocelyn Qi-Min Teo, Shannon Jing-Yi Lee, Ai-Ling Tan, Robyn Su-May Lim, Yiying Cai, Tze-Peng Lim, Andrea Lay-Hoon Kwa

Open Access Case report

Unusual manifestation of disseminated herpes simplex virus type 2 infection associated with pharyngotonsilitis, esophagitis, and hemophagocytic lymphohisitocytosis without genital involvement

Shuhei Kurosawa, Noritaka Sekiya, Kazuaki Fukushima, Kazuhiko Ikeuchi, Akito Fukuda, Hideyuki Takahashi, Fangyi Chen, Hideki Hasegawa, Harutaka Katano, Tsunekazu Hishima, Keigo Setoguchi

Open Access Case report

Pneumocystis jirovecii-related spontaneous pneumothorax, pneumomediastinum and subcutaneous emphysema in a liver transplant recipient: a case report

Wong Hoi She, Kenneth S. H. Chok, Iris W. S. Li, Ka Wing Ma, Sui Ling Sin, Wing Chiu Dai, James Y. Y. Fung, Chung Mau Lo

Open Access Case report

Cold type autoimmune hemolytic anemia- a rare manifestation of infectious mononucleosis; serum ferritin as an important biomarker

Chinthana Dematapitiya, Chiara Perera, Wajira Chinthaka, Solith Senanayaka, Deshani Tennakoon, Anfas Ameer, Dinesh Ranasinghe, Ushani Warriyapperuma, Suneth Weerarathna, Ravindra Satharasinghe

Open Access Research article

Characterizing the molecular epidemiology of Staphylococcus aureus across and within fitness facility types

Mark Dalman, Sabana Bhatta, Nagashreyaa Nagajothi, Dipendra Thapaliya, Hailee Olson, Haji Mohammad Naimi, Tara C. Smith

Open Access Case report

Unusual manifestations of visceral leishmaniasis in children: a case series and its spatial dispersion in the western region of São Paulo state, Brazil

Luiz Euribel Prestes-Carneiro, Patricia Rodrigues Naufal Spir, Mateus Fontanesi, Karen Gabriella Pereira Garcia, Francisco Assis da Silva, Edilson Ferreira Flores, Dewton de Moraes Vasconcelos

Open Access Research article

Prevalence and genotype distribution of human papillomavirus among 9945 women from the Nanhai area of Foshan

Xiao-wen Yuan, Yi-Jian Li, Quan Qiu, Zi-yuan Luo, Xue-feng Zhao

Open Access Technical advance

Cheap and rapid in-house method for direct identification of positive blood cultures by MALDI-TOF MS technology

Maya Azrad, Yoram Keness, Orna Nitzan, Nina Pastukh, Linda Tkhawkho, Victoria Freidus, Avi Peretz

Open Access Case report

Septic pulmonary embolism associated with periodontal disease: a case report and literature review

Tsuyoshi Watanabe, Masamichi Yokoe, Yoshinori Noguchi

Open Access Research article

Identfication of viral and bacterial etiologic agents of the pertussis-like syndrome in children under 5 years old hospitalized

Stephanie Saiki-Macedo, Jorge Valverde-Ezeta, Angela Cornejo-Tapia, Maria Esther Castillo, Verónica Petrozzi-Helasvuo, Miguel Angel Aguilar-Luis, Luis J. del Valle, Erico Cieza-Mora, Carlos Bada, Olguita del Aguila, Wilmer Silva-Caso, Johanna Martins-Luna, Fernando Vasquez-Achaya, Juana del Valle-Mendoza

Open Access Research article

Investigating the virulence genes and antibiotic susceptibility patterns of Vibrio cholerae O1 in environmental and clinical isolates in Accra, Ghana

David Abana, Elizabeth Gyamfi, Magdalene Dogbe, Grace Opoku, David Opare, Gifty Boateng, Lydia Mosi

Open Access Research article

A decade of antiretroviral therapy in Uganda: what are the emerging causes of death?

Agnes N. Kiragga, Frank Mubiru, Andrew D. Kambugu, Moses R. Kamya, Barbara Castelnuovo

Open Access Research article

A survey of fungal microbiota in airways of healthy volunteer subjects from Puglia (Apulia), Italy

Giovanna Elisiana Carpagnano, Antonia Susca, Giulia Scioscia, Donato Lacedonia, Grazia Cotugno, Piera Soccio, Sonia Santamaria, Onofrio Resta, Giuseppe Logrieco, Maria Pia Foschino Barbaro

Open Access Research article

Surveillance for severe hand, foot, and mouth disease from 2009 to 2015 in Jiangsu province: epidemiology, etiology, and disease burden

Hong Ji, Huan Fan, Peng-xiao Lu, Xue-Feng Zhang, Jing Ai, Chao Shi, Xiang Huo, Chang-jun Bao, Jun Shan, Yu Jin

Open Access Research article

To what extent can clinical characteristics be used to distinguish encephalitis from encephalopathy of other causes? Results from a prospective observational study

Else Quist-Paulsen, Anne-Marte Bakken Kran, Elisabeth S. Lindland, Katrine Ellefsen, Leiv Sandvik, Oona Dunlop, Vidar Ormaasen

Open Access Research article

Epidemiological characteristics, clinical manifestations, and treatment outcome of 139 paediatric Ebola patients treated at a Sierra Leone Ebola treatment center

Jia Bainga Kangbai, Christian Heumann, Michael Hoelscher, Foday Sahr, Guenter Froeschl

Open Access Research article

A prospective study of socio-demographic, clinical characteristics and treatment outcomes of children with tuberculosis in Sindh, Pakistan

Madeeha Laghari, Syed Azhar Syed Sulaiman, Amer Hayat Khan, Naheed Memon

Open Access Research article

Sub-clinical abnormalities detected by PET/MRI in household tuberculosis contacts

James S. Molton, Benjamin A. Thomas, Yan Pang, Lih Kin Khor, James Hallinan, Claire M. Naftalin, John J. Totman, David W. Townsend, Tow Keang Lim, Cynthia Bin Eng Chee, Yee Tang Wang, Nicholas I. Paton

Open Access Research article

Consecutive antibiotic use in the outpatient setting: an extensive, longitudinal descriptive analysis of antibiotic dispensing data in the Netherlands

Loek A. W. de Jong, Paul D. van der Linden, Monique M. B. Roukens, Ewoudt M. W. van de Garde, Alike W. van der Velden, Stephanie Natsch

Open Access Case report

Hairy cell leukemia presenting with Ecthyma Gangrenosum- a case report

R. Sluga, M. Tersmette, M. Sohne

Open Access Research article

Effect of ABO blood group on asymptomatic, uncomplicated and placental Plasmodium falciparum infection: systematic review and meta-analysis

Abraham Degarege, Merhawi T. Gebrezgi, Consuelo M. Beck-Sague, Mats Wahlgren, Luiz Carlos de Mattos, Purnima Madhivanan

Open Access Research article

Norovirus strain types found within the second infectious intestinal diseases (IID2) study an analysis of norovirus circulating in the community

John P. Harris, Miren Iturriza-Gomara, David J. Allen, Susan Kelly, Sarah J. O’Brien

Open Access Research article

Improving natural ventilation in hospital waiting and consulting rooms to reduce nosocomial tuberculosis transmission risk in a low resource setting

A. Roderick Escombe, Eduardo Ticona, Víctor Chávez-Pérez, Manuel Espinoza, David A. J. Moore

Open Access Research article

Temporal patterns of influenza A subtypes and B lineages across age in a subtropical city, during pre-pandemic, pandemic, and post-pandemic seasons

Linlin Zhou, Huiping Yang, Yu Kuang, Tianshu Li, Jianan Xu, Shuang Li, Ting Huang, Chuan Wang, Wanyi Li, Mingyuan Li, Shusen He, Ming Pan

Open Access Research article

Epidemiology and molecular characterization of the re-emerging measles virus among children and adults in the Haut-Ogooue, Gabon

Sonia Etenna Lekana-Douki, Pater Noster Sir-Ondo-Enguier, Octavie Banga-Mve-Ella, Romeo Karl Imboumy-Limoukou, Gael D. Maganga, Jean-Bernard Lekana-Douki, Nicolas Berthet

Open Access Research article

Coinfections and differential diagnosis in immunocompetent patients with uveitis of infectious origin

Alejandra de-la-Torre, Juanita Valdés-Camacho, Clara López de Mesa, Andrés Uauy-Nazal, Juan David Zuluaga, Lina María Ramírez-Páez, Felipe Durán, Elizabeth Torres-Morales, Jessica Triviño, Mateo Murillo, Alba Cristina Peñaranda, Juan Carlos Sepúlveda-Arias, Jorge Enrique Gómez-Marín

Open Access Research article

The respiratory microbiota: new insights into pulmonary tuberculosis

Setegn Eshetie, Dick van Soolingen

Open Access Research article

Modelling the impact of chest X-ray and alternative triage approaches prior to seeking a tuberculosis diagnosis

Abu A. M. Shazzadur Rahman, Ivor Langley, Rafael Galliez, Afrânio Kritski, Ewan Tomeny, S. Bertel Squire

Open Access Research article

Few eligible for the newly recommended short course MDR-TB regimen at a large Mumbai private clinic

Zarir F. Udwadia, Jeffrey A. Tornheim, Shashank Ganatra, Andrea DeLuca, Camilla S. Rodrigues, Amita Gupta

Open Access Research article

Safety of live attenuated varicella-zoster vaccine in patients with underlying illnesses compared with healthy adults: a prospective cohort study

Satoko Ohfuji, Kazuya Ito, Megumi Inoue, Motoki Ishibashi, Hiroko Kumashiro, Yoshio Hirota, Eiji Kayano, Naoshi Ota

Open Access Research article

Knowledge, attitude and associated factors towards tuberculosis in Lesotho: a population based study

Tegene Regassa Luba, Shangfeng Tang, Qiaoyan Liu, Simon Afewerki Gebremedhin, Matiko D. Kisasi, Zhanchun Feng

Open Access Research article

Leishmania cytochrome b gene sequence polymorphisms in southern Iran: relationships with different cutaneous clinical manifestations

Iraj Mohammadpour, Gholam Reza Hatam, Farhad Handjani, Farzaneh Bozorg-Ghalati, Daniel PourKamal, Mohammad Hossein Motazedian

Open Access Research article

Herpes zoster incidence in Germany - an indirect validation study for self-reported disease data from pretest studies of the population-based German National Cohort

Mahrrouz Caputo, Johannes Horn, André Karch, Manas K. Akmatov, Heiko Becher, Bettina Braun, Hermann Brenner, Stefanie Castell, Beate Fischer, Guido Giani, Kathrin Günther, Barbara Hoffmann, Karl-Heinz Jöckel, Thomas Keil, Birgit Klüppelholz, Lilian Krist, Michael F. Leitzmann, Wolfgang Lieb, Jakob Linseisen, Christa Meisinger, Susanne Moebus, Nadia Obi, Tobias Pischon, Sabine Schipf, Börge Schmidt, Claudia Sievers, Astrid Steinbrecher, Henry Völzke, Rafael Mikolajczyk

Open Access Research article

Trend in risk of delay in diagnosis of new pulmonary tuberculosis in Northwest China from 2008 to 2017

Hongguang Chen, Tingwei Wang, Lin Liu, Donglin Wang, Qingxue Cheng

Open Access Review

Recognition of aerosol transmission of infectious agents: a commentary

Raymond Tellier, Yuguo Li, Benjamin J. Cowling, Julian W. Tang

Open Access Case report

Group A streptococcus endocarditis in children: 2 cases and a review of the literature

Nao Ogura, Kouki Tomari, Tomotada Takayama, Naoya Tonegawa, Teppei Okawa, Takashi Matsuoka, Mami Nakayashiro, Tsutomu Matsumora

Open Access Research article

Post-traumatic osteomyelitis in Middle East war-wounded civilians: resistance to first-line antibiotics in selected bacteria over the decade 2006–2016

Fabien Fily, Jean-Baptiste Ronat, Nada Malou, Rupa Kanapathipillai, Caroline Seguin, Nagham Hussein, Rasheed M. Fakhri, Céline Langendorf

Open Access Research article

Crimean Congo hemorrhagic fever serosurvey in humans for identifying high-risk populations and high-risk areas in the endemic state of Gujarat, India

Devendra T. Mourya, Pragya D. Yadav, Yogesh K. Gurav, Prachi G. Pardeshi, Anita M. Shete, Rajlaxmi Jain, Dinkar D. Raval, Kamlesh J. Upadhyay, Deepak Y. Patil

Open Access Research article

The impact of homocysteine, B12, and D vitamins levels on functional neurocognitive performance in HIV-positive subjects

Katia Falasca, Marta Di Nicola, Giuseppe Di Martino, Claudio Ucciferri, Francesca Vignale, Alessandro Occhionero, Jacopo Vecchiet

Open Access Research article

APACHE-II score for anti-tuberculosis tolerance in critically ill patients: a retrospective study

Junke Qiu, Caihong Wang, Xiaohong Pan, Lei Pan, Xiaoqing Huang, Jiekun Xu, Xiaobo Ji, Minjie Mao

Open Access Research article

Incidence and predictors of LTFU among adults with TB/HIV co-infection in two governmental hospitals, Mekelle, Ethiopia, 2009–2016: survival model approach

Kebede Embaye Gezae, Haftom Temesgen Abebe, Letekirstos Gebreegziabher Gebretsadik

Open Access Research article

Development of a lateral flow recombinase polymerase amplification assay for rapid and visual detection of Cryptococcus neoformans/C. gattii in cerebral spinal fluid

Qinglin Ma, Jilong Yao, Shixin Yuan, Houming Liu, Ning Wei, Jianming Zhang, Wanshui Shan

Open Access Research article

The proportion, origin and pro-inflammation roles of low density neutrophils in SFTS disease

Yajiao Li, Huiyu Li, Hua Wang, Hong Pan, Huixia Zhao, Honglin Jin, Shenghua Jie

Open Access Research article

Test and Treat TB: a pilot trial of GeneXpert MTB/RIF screening on a mobile HIV testing unit in South Africa

Ingrid V. Bassett, Leah S. Forman, Sabina Govere, Hilary Thulare, Simone C. Frank, Bright Mhlongo, Elena Losina

Open Access Case report

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Open Access Correction

Correction to: Nasopharyngeal carriage of Streptococcus pneumoniae in children under 5 years of age before introduction of pneumococcal vaccine (PCV10) in urban and rural districts in Pakistan

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Open Access Research article

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Open Access Research article

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Open Access Case report

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Open Access Research article

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Open Access Research article

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Open Access Research article

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Open Access Research article

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Open Access Research article

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Open Access Research article

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Open Access Debate

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Open Access Research article

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Open Access Case report

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Open Access Research article

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Open Access Research article

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Open Access Case report

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Open Access Technical advance

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Open Access Research article

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Open Access Research article

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Open Access Research article

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Open Access Research article

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Open Access Research article

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Open Access Research article

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Open Access Research article

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Open Access Research article

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Open Access Research article

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Open Access Research article

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Open Access Research article

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Open Access Research article

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Open Access Research article

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Open Access Research article

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Open Access Research article

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Open Access Technical advance

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Open Access Research article

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Open Access Case report

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Tomohiro Takehara, Tetsuo Tani, Ken Yajima, Mako Watanabe, Yoshihito Otsuka, Hidefumi Koh

Open Access Research article

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Open Access Research article

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Jinjian Fu, Ling Li, Zhuoxin Liang, Shaolin Xu, Nan Lin, Peixu Qin, Xiaohua Ye, Eric McGrath

Open Access Research article

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Open Access Research article

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Open Access Research article

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Zi-Hong Cai, Yuan-Yuan Dai, Lin-Yan Huang, Wen-Sheng Zhang, Xu-Guang Guo

Open Access Research article

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Open Access Research article

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Open Access Case report

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Open Access Research article

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Open Access Research article

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Open Access Research article

A maximum curvature method for estimating epidemic onset of seasonal influenza in Japan

Jun Cai, Bing Zhang, Bo Xu, Karen Kie Yan Chan, Gerardo Chowell, Huaiyu Tian, Bing Xu

Open Access Debate

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Open Access Research article

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Open Access Case report

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Open Access Research article

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Open Access Research article

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Open Access Correction

Correction to: Association of HIV-infection, antiretroviral treatment and metabolic syndrome with large artery stiffness: a cross-sectional study

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Open Access Research article

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Pranay Nadella, Emily R. Smith, Alfa Muhihi, Ramadhani A. Noor, Honorati Masanja, Wafaie W. Fawzi, Christopher R. Sudfeld

Open Access Research article

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Open Access Research article

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Open Access Research article

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Open Access Research article

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Robert Luo, Joanna Sickler, Farnaz Vahidnia, Yuan-Chi Lee, Bianca Frogner, Matthew Thompson

Open Access Research article

Rate of viral load change and adherence of HIV adult patients treated with Efavirenz or Nevirapine antiretroviral regimens at 24 and 48 weeks in Yaoundé, Cameroon: a longitudinal cohort study

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Open Access Research article

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Open Access Research article

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Open Access Case report

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Open Access Research article

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Yuting Tan, Xiaoqing Liu, Xiaochun Shi

Open Access Research article

Decreased susceptibility to chlorhexidine and distribution of qacA/B genes among coagulase-negative Staphylococcus clinical samples

Bruna Costa Moura do Vale, Acácia Gentil Nogueira, Thiago André Cidral, Maria Carolina Soares Lopes, Maria Celeste Nunes de Melo

Open Access Research article

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Open Access Research article

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Sukhyun Ryu, Ricardo J. Soares Magalhães, Byung Chul Chun

Open Access Research article

Usefulness of paired samples for the Serodiagnosis of toxoplasmosis infection in a tertiary teaching Hospital in Malaysia

Padmaloseni Thangarajah, Khalid Hajissa, Weng Kin Wong, Muhammad Amiruddin Abdullah, Nabilah Ismail, Zeehaida Mohamed

Open Access Case report

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Open Access Case report

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Munehiro Matsumoto, Kentaro Nagaoka, Masaru Suzuki, Satoshi Konno, Kei Takahashi, Taichi Takashina, Nobuhisa Ishiguro, Masaharu Nishimura

Open Access Research article

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Open Access Research article

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Open Access Research article

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Open Access Research article

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Open Access Research article

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Open Access Research article

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Open Access Research article

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Open Access Research article

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Open Access Research article

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Open Access Research article

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Open Access Case report

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Liwei Pang, Shuodong Wu, Jing Kong

Open Access Research article

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Open Access Case report

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Open Access Research article

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Open Access Research article

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Open Access Research article

Activation of the kynurenine pathway is associated with poor outcome in Pneumocystis pneumonia patients infected with HIV: results of 2 months cohort study

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Open Access Correction

Correction to: Seasonal dynamics of influenza in Brazil: the latitude effect

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Open Access Editorial

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Joseph D. Tucker, Benjamin M. Meier, Cecilia Devoto, Eva Szunyogova, Stefan Baral

Open Access Research article

Association of active Helicobacter pylori infection and anemia in elderly males

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Open Access Correction

Correction to: Time to positivity of blood culture is a risk factor for clinical outcomes in Staphylococcus aureus bacteremia children: a retrospective study

Yuanyuan Li, Qinyuan Li, Guangli Zhang, Huan Ma, Yi Wu, Qian Yi, Lili Jiang, Jiao Wan, Fengtao Suo, Zhengxiu Luo

Open Access Research article

Bloodstream infections caused by multidrug-resistant gram-negative bacteria: epidemiological, clinical and microbiological features

Helena Ferreira Leal, Jailton Azevedo, Giulyana Evelyn Oliveira Silva, Angelica Maria Lima Amorim, Larissa Rangel Cabral de Roma, Ana Carolina Palmeira Arraes, Edilane Lins Gouveia, Mitermayer Galvão Reis, Ana Verena Mendes, Marcio de Oliveira Silva, Maria Goreth Barberino, Ianick Souto Martins, Joice Neves Reis

Open Access Case report

Lesson learned from the investigation and response of Lassa fever outbreak, Margibi County, Liberia, 2018: case report

Abyot Bekele Woyessa, Leroy Maximore, Darius Keller, John Dogba, Myer Pajibo, Kumblytee Johnson, Emmanuel Saydee, Julius Monday, Roland Tuopileyi II, Nuha Mahmoud

Open Access Research article

Clinical and epidemiological characteristics of KPC-producing Klebsiella pneumoniae from bloodstream infections in a tertiary referral center in Italy

Lucia Brescini, Gianluca Morroni, Chiara Valeriani, Sefora Castelletti, Marina Mingoia, Serena Simoni, Annamaria Masucci, Roberto Montalti, Marco Vivarelli, Andrea Giacometti, Francesco Barchiesi

Open Access Research article

Spatial analysis of HIV-TB co-clustering in Uganda

Augustus Aturinde, Mahdi Farnaghi, Petter Pilesjö, Ali Mansourian

Open Access Research article

Spread and clinical severity of respiratory syncytial virus A genotype ON1 in Germany, 2011–2017

Andrea Streng, David Goettler, Miriam Haerlein, Lisa Lehmann, Kristina Ulrich, Christiane Prifert, Christine Krempl, Benedikt Weißbrich, Johannes G. Liese

Open Access Research article

Telbivudine can safely reduce mother-to-child transmission in chronic hepatitis B women after 12 weeks of gestation

Li-fen Han, Jian-ming Zheng, Li-qing Zheng, Hai-bing Gao, Li-xia Chen, Qing-ling Xu, Yi-hong Chai, Xin Zhang, Chen Pan, Lv-feng Yao

Open Access Research article

Evidence for heterogeneity in China’s progress against pulmonary tuberculosis: uneven reductions in a major center of ongoing transmission, 2005–2017

Ting Li, Qu Cheng, Charles Li, Everleigh Stokes, Philip Collender, Alison Ohringer, Xintong Li, Jing Li, Jonathan L. Zelner, Song Liang, Changhong Yang, Justin V. Remais, Jin’ge He

Open Access Research article

Allele-specific real-time PCR testing for minor macrolide-resistant Mycoplasma Pneumoniae

Dongxing Guo, Wenjuan Hu, Baoping Xu, Jingyi Li, Dan Li, Shaogang Li, Zhaoyong Wu, Ran Wei, Xiujun Tian, Kunling Shen, Deli Xin

Open Access Research article

Establishment and development of national community-based collaborative innovation demonstration areas to achieve the control target of hepatitis B in China

Bing Ruan, Zhixin Yu, Shigui Yang, Kaijin Xu, Jingjing Ren, Jun Yao, Nanping Wu, Chengbo Yu, Min Deng, Tiansheng Xie, Ping Chen, Chencheng Wang, Yiping Li, Yanhong Zhao, Jifang Sheng, Yunde Hou, Zunyou Wu, Shuigao Jin, Yude Chen, Mengfeng Li, Fengcai Zhu, Hong Tang, Yuantao Hao, Xinghuo Pang, Lin Lu, Wen Yang, Zhengan Yuan, Aiqiang Xu, Zizhao Li, Mingjian Ni, Yongping Yan, Qiu Zhong, Lin Zhou, Guojian Li, Qun Meng, Jianping Hu, Hong Zhou, Guangyu Zhang, Dexin Li, Wei Jiang, Qing Li, Peixin Wu, Ruoqi Xing, Jinhui Gu, Di Gao, Lanjuan Li

Open Access Research article

Use of nanotechnology for infectious disease diagnostics: application in drug resistant tuberculosis

Roshanthi Eranga Karunaratne, Lahiru A. Wijenayaka, Sandya Sulochana Wijesundera, K. M. Nalin De Silva, Chamila Priyangani Adikaram, Jennifer Perera

Open Access Research article

The association between tuberculin skin test result and active tuberculosis risk of college students in Beijing, China: a retrospective cohort study

Demin Cao, Zhiguo Zhang, Zhen Yang, Shubo Ma, Zhaogang Sun, Huijuan Duan, Baoli Zhu, Fei Zhao

Open Access Research article

Phylogeny, sequence-typing and virulence profile of uropathogenic Escherichia coli (UPEC) strains from Pakistan

Ihsan Ali, Zara Rafaque, Ibrar Ahmed, Faiza Tariq, Sarah E. Graham, Elizabeth Salzman, Betsy Foxman, Javid Iqbal Dasti

Open Access Correction

Correction to: Outbreak of carbapenem-resistant Acinetobacter baumannii carrying the carbapenemase OXA-23 in ICU of the eastern Heilongjiang Province, China

Yongxin Zhao, Kewang Hu, Jisheng Zhang, Yuhang Guo, Xuecai Fan, Yong Wang, Sedzro Divine Mensah, Xiaoli Zhang

Open Access Research article

Upregulation of cell-surface mucin MUC15 in human nasal epithelial cells upon influenza A virus infection

Zhuang Gui Chen, Zhao Ni Wang, Yan Yan, Jing Liu, Ting Ting He, Kim Thye Thong, Yew Kwang Ong, Vincent T. K. Chow, Kai Sen Tan, De Yun Wang

Open Access Research article

A highly sensitive modified nested PCR to enhance case detection in leishmaniasis

Bhagya Deepachandi, Sudath Weerasinghe, Preethi Soysa, Nadira Karunaweera, Yamuna Siriwardana

Open Access Research article

An outbreak of epidemic keratoconjunctivitis caused by human adenovirus type 8 in primary school, southwest China

Duo Li, Jie-Nan Zhou, Hong Li, Cun-Ying He, Qing-Shan Dai, Xiang-Lan Li, Jian-Fang He, Hong He, Ming-Bao Li, L I-Li Jiang, Yao-Yao Chen, Wen Xu

Open Access Case report

Successful management of visceral disseminated varicella zoster virus infection during treatment of membranous nephropathy: a case report

Yoshitaka Furuto, Mariko Kawamura, Akio Namikawa, Hiroko Takahashi, Yuko Shibuya

Open Access Research article

Sociodemographic and clinical characteristics of persons who experienced spontaneous hepatitis C viral clearance

Mabel Michille Kimble, Marjan Javanbakht, Kara W. Chew, Chrysovalantis Stafylis, Di He, Samantha Ramirez, Yeonsoo Baik, Sammy Saab, Jeffrey D. Klausner

Open Access Research article

Interaction of nutritional status and diabetes on active and latent tuberculosis: a cross-sectional analysis

Rachel W. Kubiak, Sonali Sarkar, C. Robert Horsburgh, Gautam Roy, Mario Kratz, Ayiraveetil Reshma, Selby Knudsen, Padmini Salgame, Jerrold J. Ellner, Paul K. Drain, Natasha S. Hochberg

Open Access Research article

Detection of risk clusters for deaths due to tuberculosis specifically in areas of southern Brazil where the disease was supposedly a non-problem

Luana Seles Alves, Danielle Talita dos Santos, Marcos Augusto Moraes Arcoverde, Thais Zamboni Berra, Luiz Henrique Arroyo, Antônio Carlos Vieira Ramos, Ivaneliza Simionato de Assis, Ana Angélica Rêgo de Queiroz, Jonas Boldini Alonso, Josilene Dália Alves, Marcela Paschoal Popolin, Mellina Yamamura, Juliane de Almeida Crispim, Elma Mathias Dessunti, Pedro Fredemir Palha, Francisco Chiaraval-Neto, Carla Nunes, Ricardo Alexandre Arcêncio

Open Access Research article

Virulence characteristics of multidrug resistant biofilm forming Acinetobacter baumannii isolated from intensive care unit patients

Habib Zeighami, Fatemeh Valadkhani, Reza Shapouri, Elham Samadi, Fakhri Haghi

Open Access Case report

Recurrent arthritis caused by Candida parapsilosis: a case report and literature review

Hang Fang, Lisi Huang, Rongkai Zhang, Denghui Xie, Hengbiao Sun, Chun Zeng, Daozhang Cai

Open Access Research article

Utility of oral fluid samples for hepatitis B antibody detection in real life conditions

Helena Medina Cruz, Vanessa Salete de Paula, Elisangela Ferreira da Silva, Kycia Maria Rodrigues do Ó, Flavio Augusto Pádua Milagres, Marcelo Santos Cruz, Francisco Inácio Bastos, Jurema Corrêa da Mota, Priscila Pollo-Flores, Erotildes Leal, Ana Rita Coimbra Motta-Castro, Lia Laura Lewis-Ximenez, Elisabeth Lampe, Livia Melo Villar

Open Access Study protocol

Understanding group A streptococcal pharyngitis and skin infections as causes of rheumatic fever: protocol for a prospective disease incidence study

Julie Bennett, Nicole J. Moreland, Jane Oliver, Julian Crane, Deborah A. Williamson, Dianne Sika-Paotonu, Matire Harwood, Arlo Upton, Susan Smith, Jonathan Carapetis, Michael G. Baker

Open Access Research article

Hepatitis C virus infection status and associated factors among a multi-site sample of people who used illicit drugs in the Amazon region

Aldemir B. Oliveira-Filho, Francisco Junior A. Santos, Fabricio Quaresma Silva, Nairis Costa Raiol, Camila Carla S. Costa, Juliana Nadia F. Piauiense, Luisa Caricio Martins, Yasmin Maria N. Cardoso, Jeruza Ferraz F. Di Miceli, Rafael Lima Resque, Gláucia C. Silva-Oliveira, Luiz Marcelo L. Pinheiro, Luiz Fernando A. Machado, João Renato R. Pinho, José Alexandre R. Lemos, Emil Kupek, Benedikt Fischer

Open Access Research article

Chronic disseminated candidiasis manifesting as hepatosplenic abscesses among patients with hematological malignancies

Chien-Yuan Chen, Aristine Cheng, Feng-Ming Tien, Po-Chu Lee, Hwei-Fang Tien, Wang-Huei Sheng, Yee-Chun Chen

Open Access Case report

Severe Guillain-Barré syndrome associated with chronic active hepatitis C and mixed cryoglobulinemia: a case report

Alexandre Chlilek, Claire Roger, Laurent Muller, Marie-Josée Carles, Robin Stephan, Didier Laureillard, Jean-Philippe Lavigne, Jean-Yves Lefrant, Albert Sotto

Open Access Case report

Rat bite fever caused by Streptobacillus moniliformis infection in a Chinese patient

Wei-Wei Zhang, Yi-Bing Hu, Guo-Xin He, Yu Zhou, Liang Hong, Ji-Guang Ding

Open Access Research article

Utilization of systemic inflammatory response syndrome criteria in predicting mortality among geriatric patients with influenza in the emergency department

Henry Chih-Hung Tai, Chien-Chun Yeh, Yen-An Chen, Chien-Chin Hsu, Jiann-Hwa Chen, Wei-Lung Chen, Chien-Cheng Huang, Jui-Yuan Chung

Open Access Research article

Elevated expression of serum soluble ST2 in clinical relapse after stopping long-term Nucleos(t)ide analogue therapy for chronic hepatitis B

Linqing Xie, Guichan Liao, Hongjie Chen, Muye Xia, Xuan Huang, Rong Fan, Jie Peng, Xiaoyong Zhang, Hongyan Liu

Open Access Research article

Prevalence of tuberculosis, multidrug resistant tuberculosis and associated risk factors among smear negative presumptive pulmonary tuberculosis patients in Addis Ababa, Ethiopia

Waganeh Sinshaw, Abebaw Kebede, Adane Bitew, Ephrem Tesfaye, Mengistu Tadesse, Zemedu Mehamed, Bazezew Yenew, Misikir Amare, Biniyam Dagne, Getu Diriba, Ayinalem Alemu, Muluwork Getahun, Dinka Fikadu, Kassu Desta, Habteyes Hailu Tola

Open Access Research article

Cervicofacial necrotizing fasciitis among patients attending the Muhimbili National Hospital, Dar es Salaam, Tanzania

Arnold A. Mtenga, Boniphace M. Kalyanyama, Sira S. Owibingire, Karpal S. Sohal, Elison N.M. Simon

Open Access Research article

Seroprevalence and molecular characteristics of varicella-zoster virus infection in Chinese children

Lin Luan, Xiaochen Shen, Jing Qiu, Yang Jing, Jingqi Zhang, Jie Wang, Jun Zhang, Chen Dong

Open Access Research article

Online HIV prevention intervention on condomless sex among men who have sex with men: a web-based randomized controlled trial

Weibin Cheng, Huifang Xu, Weiming Tang, Fei Zhong, Gang Meng, Zhigang Han, Jinkou Zhao

Open Access Research article

Long-term follow-up of HCV infected kidney transplant recipients receiving direct-acting antiviral agents: a single-center experience in China

Jian Zhang, Wen Sun, Jun Lin, Ye Tian, Linlin Ma, Lei Zhang, Yichen Zhu, Wei Qiu

Open Access Research article

Sensitivity and specificity of diagnostic tests for Lassa fever: a systematic review

Noah Fongwen Takah, Polina Brangel, Priyanka Shrestha, Rosanna Peeling

Open Access Case report

Cervical anaerobic vertebral osteomyelitis following surgical tracheotomy: a case report

Romaric Larcher, Camille Maury, Jonathan Charbit, Helene Jean-Pierre, Vincent Le Moing, Kada Klouche, Xavier Capdevila

Open Access Technical advance

Characterization of clinical patterns of dengue patients using an unsupervised machine learning approach

Gleicy Macedo Hair, Flávio Fonseca Nobre, Patrícia Brasil

Open Access Research article

Intravenous-to-oral antibiotic switch therapy: a cross-sectional study in critical care units

Juliano Gasparetto, Felipe Francisco Tuon, Dayana dos Santos Oliveira, Tiago Zequinao, Gabriel Rammert Pipolo, Gabriel Velloso Ribeiro, Paola Delai Benincá, June Alisson Westarb Cruz, Thyago Proenca Moraes

Open Access Research article

A systematic review of the epidemiology of hepatitis A in Africa

Jenna Patterson, Leila Abdullahi, Gregory D. Hussey, Rudzani Muloiwa, Benjamin M. Kagina

Open Access Research article

Diagnosis of congenital CMV infection via DBS samples testing and neonatal hearing screening: an observational study in Italy

Laura Pellegrinelli, Cristina Galli, Valeria Primache, Mirko Alde’, Enrico Fagnani, Federica Di Berardino, Diego Zanetti, Elena Pariani, Umberto Ambrosetti, Sandro Binda

Open Access Research article

Fever of unknown origin (FUO): which are the factors influencing the final diagnosis? A 2005–2015 systematic review

Francesco Maria Fusco, Raffaella Pisapia, Salvatore Nardiello, Stefano Domenico Cicala, Giovanni Battista Gaeta, Giuseppina Brancaccio

Open Access Research article

Retention in care and adherence to HIV and AIDS treatment in Anambra State Nigeria

Chukwuma David Umeokonkwo, Chima Ariel Onoka, Pearl Adaoha Agu, Edmund Ndudi Ossai, Muhammad Shakir Balogun, Lawrence Ulu Ogbonnaya

Open Access Research article

Prevalence of hepatitis C infection among the general population and high-risk groups in the EU/EEA: a systematic review update

Ru Han, Junwen Zhou, Clément François, Mondher Toumi

Open Access Research article

Self-reported diabetes and herpes zoster are associated with a weak humoral response to the seasonal influenza A H1N1 vaccine antigen among the elderly

Manas K. Akmatov, Peggy Riese, Stephanie Trittel, Marcus May, Jana Prokein, Thomas Illig, Christoph Schindler, Carlos A. Guzmán, Frank Pessler

Open Access Research article

Serum-based diagnosis of Pneumocystis pneumonia by detection of Pneumocystis jirovecii DNA and 1,3-β-D-glucan in HIV-infected patients: a retrospective case control study

Helena Hammarström, Anna Grankvist, Isabell Broman, Nahid Kondori, Christine Wennerås, Magnus Gisslen, Vanda Friman

Open Access Case report

Rapid diagnosis of Capnocytophaga canimorsus septic shock in an immunocompetent individual using real-time Nanopore sequencing: a case report

Seweryn Bialasiewicz, Tania P. S. Duarte, Son H. Nguyen, Vichitra Sukumaran, Alexandra Stewart, Sally Appleton, Miranda E. Pitt, Arnold Bainomugisa, Amy V. Jennison, Rikki Graham, Lachlan J. M. Coin, Krispin Hajkowicz

Open Access Case report

A rare case of the simultaneous location of Echinococcus multilocularis in the liver and the head of the pancreas: case report analysis and review of literature

Marek Kowalczyk, Waldemar Kurpiewski, Ewa Zieliński, Dariusz Zadrożny, Łukasz Klepacki, Wit Juśkiewicz, Jacek Lasocki, Łukasz Dyśko, Krzysztof Batia, Wiesław Pesta

Open Access Research article

Prevalence and factors associated with one-year mortality of infectious diseases among elderly emergency department patients in a middle-income country

Maythita Ittisanyakorn, Sukkhum Ruchichanantakul, Alissara Vanichkulbodee, Jiraporn Sri-on

Open Access Research article

Efficacy and cost-effectiveness of early antiretroviral therapy and partners’ pre-exposure prophylaxis among men who have sex with men in Shenyang, China: a prospective cohort and costing study

Qing-hai Hu, Kathrine Meyers, Jun-jie Xu, Zhen-xing Chu, Jing Zhang, Hai-bo Ding, Xiao-xu Han, Yong-jun Jiang, Wen-qing Geng, Hong Shang

Open Access Research article

Oral candidiasis is a significant predictor of subsequent severe infections during immunosuppressive therapy in anti-neutrophil cytoplasmic antibody-associated vasculitis

Makoto Yamaguchi, Takayuki Katsuno, Shiho Iwagaitsu, Hironobu Nobata, Hiroshi Kinashi, Shogo Banno, Yasuhiko Ito

Open Access Research article

Risk factors for acquisition of scrub typhus in children admitted to a tertiary centre and its surrounding districts in South India: a case control study

Winsley Rose, Gagandeep Kang, Valsan Philip Verghese, Sadanandane Candassamy, Prasanna Samuel, John Jude Antony Prakash, Jayaprakash Muliyil

Open Access Case report

A case report on mother-to-child transmission of Brucella in human, China

Guozhong Tian, Zhifei Zhan, Aimin Zhang, Hongyan Zhao, Xin Xia, Zixiang He, Bing Zhang, Menghua Zhao, Dongri Piao, Dianying Lu, Hai Jiang

Open Access Research article

Predicting the risk of pulmonary tuberculosis based on the neutrophil-to-lymphocyte ratio at TB screening in HIV-infected individuals

Reiko Miyahara, Surachai Piyaworawong, Vivek Naranbhai, Prarit Prachamat, Prapimporn Kriengwatanapong, Naho Tsuchiya, Jiraporn Wongyai, Surasit Bupachat, Norio Yamada, Surin Summanapan, Surakameth Mahasirimongkol, Hideki Yanai

Open Access Research article

Clinical characteristics and outcomes during a severe influenza season in China during 2017–2018

Xiaofang Fu, Yuqing Zhou, Jie Wu, Xiaoxiao Liu, Cheng Ding, Chenyang Huang, Shufa Zheng, Dhanasekaran Vijaykrishna, Yu Chen, Lanjuan Li, Shigui Yang

Open Access Research article

Spatial clusters of HIV-1 genotypes in a recently infected population in Yunnan, China

Min Chen, Yanling Ma, Huichao Chen, Jie Dai, Hongbing Luo, Chaojun Yang, Lijuan Dong, Xiaomei Jin, Min Yang, Li Yang, Lijun Song, Zhizhong Song, Manhong Jia

Open Access Research article

Characteristics of women infected with human papillomavirus in a tertiary hospital in Beijing China, 2014–2018

Liang Ma, Jieping Lei, Li Ma, Xiao Cong, Na Wang, Hui Yang, Qian Liu, Yang Yu, Yongtong Cao

Open Access Research article

Bloodstream and catheter-related infections due to different clones of multidrug-resistant and biofilm producer Corynebacterium striatum

Juliana Nunes Ramos, Cassius Souza, Yuri Vieira Faria, Eliane Cristine da Silva, João Flávio Carneiro Veras, Paulo Victor Pereira Baio, Sérgio Henrique Seabra, Lilian de Oliveira Moreira, Raphael Hirata Júnior, Ana Luíza Mattos-Guaraldi, Verônica Viana Vieira

Open Access Research article

Quantitative investigation of factors relevant to the T cell spot test for tuberculosis infection in active tuberculosis

Kui Li, Caiyong Yang, Zicheng Jiang, Shengxi Liu, Jun Liu, Chuanqi Fan, Tao Li, Xuemin Dong

Open Access Study protocol

A cluster randomized controlled trial of extending ART refill intervals to six-monthly for anti-retroviral adherence clubs

Lynne Wilkinson, Anna Grimsrud, Tali Cassidy, Catherine Orrell, Jacqueline Voget, Helen Hayes, Claire Keene, Sarah Jane Steele, Rodd Gerstenhaber

Open Access Case report

Chronic hepatitis E after kidney transplantation with an antibody response suggestive of reinfection: a case report

Marcus Panning, Kristi Basho, Andreas Fahrner, Christoph Neumann-Haefelin

Open Access Technical advance

Rapid and simple colorimetric detection of multiple influenza viruses infecting humans using a reverse transcriptional loop-mediated isothermal amplification (RT-LAMP) diagnostic platform

Su Jeong Ahn, Yun Hee Baek, Khristine Kaith S. Lloren, Won-Suk Choi, Ju Hwan Jeong, Khristine Joy C. Antigua, Hyeok-il Kwon, Su-Jin Park, Eun-Ha Kim, Young-il Kim, Young-Jae Si, Seung Bok Hong, Kyeong Seob Shin, Sungkun Chun, Young Ki Choi, Min-Suk Song

Open Access Research article

Association between the vaginal microbiome and high-risk human papillomavirus infection in pregnant Chinese women

Yulian Chen, Zubei Hong, Wenjing Wang, Liying Gu, Hua Gao, Lihua Qiu, Wen Di

Open Access Research article

Fecal carriage and molecular epidemiology of carbapenem-resistant Enterobacteriaceae from outpatient children in Shanghai

Fen Pan, Dongxing Tian, Bingjie Wang, Wantong Zhao, Huihong Qin, Tiandong Zhang, Hong Zhang

Open Access Research article

Risk prediction for severe disease and better diagnostic accuracy in early dengue infection; the Colombo dengue study

Ponsuge Chathurani Sigera, Ranmalee Amarasekara, Chaturaka Rodrigo, Senaka Rajapakse, Praveen Weeratunga, Nipun Lakshita De Silva, Chun Hong Huang, Malaya K. Sahoo, Benjamin A. Pinsky, Dylan R. Pillai, Hasitha A. Tissera, Saroj Jayasinghe, Shiroma Handunnetti, Sumadhya D. Fernando

Open Access Research article

Comparative study of clinical and epidemiological characteristics of major pediatric adenovirus epidemics in southern Taiwan

Ching-Fen Shen, Shih-Min Wang, Jen-Ren Wang, Yu-Shiang Hu, Tzong-Shiann Ho, Ching-Chuan Liu

Open Access Research article

Estimating the annual risk of infection with Mycobacterium tuberculosis among adolescents in Western Kenya in preparation for TB vaccine trials

Videlis Nduba, Anna H. van’t Hoog, Annefleur de Bruijn, Ellen M. H. Mitchell, Kayla Laserson, Martien Borgdorff

Open Access Research article

Pregnancy as a risk factor for severe influenza infection: an individual participant data meta-analysis

Dominik Mertz, Calvin Ka-Fung Lo, Lyubov Lytvyn, Justin R. Ortiz, Mark Loeb, Li Wei Ang, Mehta Asmita Anlikumar, Isabelle Bonmarin, Victor Hugo Borja-Aburto, Heinz Burgmann, Jordi Carratalà, Gerardo Chowell, Catia Cilloniz, Jessica Cohen, Jeffery Cutter, Laurent Filleul, Shikha Garg, Steffen Geis, Melissa Helferty, Wan-Ting Huang, Seema Jain, Biljana Joves Sevic, Paul Kelly, Gabriela Kusznierz, Nicola Lehners, Luana Lenzi, Ivan T. Ling, Robyn Mitchell, Siobhain A. Mulrennan, Sergio A. Nishioka, Robert Norton, Won Sup Oh, Pablo Orellano, Wolfgang Poeppl, Roberto Pontarolo, Odette Popovici, Alejandro Rodriquez, Bettina Schlehe, Paul Schnitzler, Bunyamin Sertogullarindan, Yuelong Shu, Geoffrey Taylor, Deborah L. Thompson, Antoni Torres, Arianne B. van Gageldonk-Lafeber, Diego Viasus, Quanyi Wang, Cuiling Xu

Open Access Case report

A case report of pulmonary Botrytis sp. infection in an apparently healthy individual

Seishu Hashimoto, Eisaku Tanaka, Masakuni Ueyama, Satoru Terada, Takashi Inao, Yusuke Kaji, Takehiro Yasuda, Takashi Hajiro, Tatsuo Nakagawa, Satoshi Noma, Gen Honjo, Yoichiro Kobashi, Noriyuki Abe, Katsuhiko Kamei, Yoshio Taguchi

Open Access Research article

Links between transactional sex and HIV/STI-risk and substance use among a large sample of European men who have sex with men

Rigmor C. Berg, Peter Weatherburn, Ulrich Marcus, Axel J. Schmidt

Open Access Correspondence

Correspondence: Guillain-Barré syndrome and hemorrhagic fever with renal syndrome

Linpei Jia, Rufu Jia, Hongliang Zhang

Open Access Research article

Risk factors for viral hepatitis C infection in Rwanda: results from a nationwide screening program

Jean Damascene Makuza, Carol Y. Liu, Corneille Killy Ntihabose, Donatha Dushimiyimana, Sabine Umuraza, Marie Paul Nisingizwe, Justine Umutesi, Janvier Serumondo, Soline Dusabeyesu Mugeni, Muhamed Semakula, Neil Gupta, Margaret Hellard, Sabin Nsanzimana

Open Access Research article

Change in prevalence and molecular characteristics of isoniazid-resistant tuberculosis over a 10-year period in China

Fengmin Huo, Jie Lu, Zhaojing Zong, Wei Jing, Jin Shi, Yifeng Ma, Lingling Dong, Liping Zhao, Yufeng Wang, Hairong Huang, Yu Pang

Open Access Research article

Treatment outcomes and risk factors of extra-pulmonary tuberculosis in patients with co-morbidities

Amer Hayat Khan, Syed Azhar Syed Sulaiman, Madeeha Laghari, Mohamed Azmi Hassali, Abdul Razak Muttalif, Zohra Bhatti, Long Chiau Ming, Bandeh Ali Talpur

Open Access Research article

Knowledge and attitude towards pregnancy-related issues of Zika virus infection among general practitioners in Indonesia

Harapan Harapan, Yogambigai Rajamoorthy, Prattama S. Utomo, Samsul Anwar, Abdul M. Setiawan, Alma Alleta, Alfredo Bambang, Muhammad R. Ramadana, Ikram Ikram, Nur Wahyuniati, Reza Maulana, Ichsan Ichsan, Rosaria Indah, Abram L. Wagner, Ulrich Kuch, David A. Groneberg, Alfonso J. Rodríguez-Morales, Mohd Andalas, Ruth Müller, Mudatsir Mudatsir, Allison Imrie

Open Access Research article

Prospective study of the serum Aspergillus-specific IgG, IgA and IgM assays for chronic pulmonary aspergillosis diagnosis

Xiuqing Ma, Kaifei Wang, Xin Zhao, Yang Liu, Yanqin Li, Xiaotian Yu, Chunsun Li, David W. Denning, Lixin Xie

Open Access Research article

Presepsin and fetuin-A dyad for the diagnosis of proven sepsis in preterm neonates

Halil Değirmencioğlu, Buse Ozer Bekmez, Turan Derme, Mehmet Yekta Öncel, Fuat Emre Canpolat, Cüneyt Tayman

Open Access Research article

The resurgence of the norovirus GII.4 variant associated with sporadic gastroenteritis in the post-GII.17 period in South China, 2015 to 2017

Liang Xue, Weicheng Cai, Junshan Gao, Le Zhang, Ruimin Dong, Yonglai Li, Haoming Wu, Moutong Chen, Jumei Zhang, Juan Wang, Qingping Wu

Open Access Research article

Prevalence and clinical impact of Streptococcus pneumoniae nasopharyngeal carriage in solid organ transplant recipients

Cristina Roca-Oporto, Tania Cebrero-Cangueiro, María Luisa Gil-Marqués, Gema Labrador-Herrera, Younes Smani, Francisco Manuel González-Roncero, Luis Miguel Marín, Jerónimo Pachón, María Eugenia Pachón-Ibáñez, Elisa Cordero

Open Access Research article

Identification of early biomarkers in a rabbit model of primary Candida pneumonia

Gang Lu, Chen Wang, Chunrong Wu, Lei Yan, Jianguo Tang

Open Access Research article

Pilot phase of an internet-based RCT of HIVST targeting MSM and transgender people in England and Wales: advertising strategies and acceptability of the intervention

T. Charles Witzel, Michelle M. Gabriel, Leanne McCabe, Peter Weatherburn, Mitzy Gafos, Andrew Speakman, Roger Pebody, Fiona M. Burns, Chris Bonell, Fiona C. Lampe, David T. Dunn, Denise Ward, Justin Harbottle, Andrew N. Phillips, Sheena McCormack, Alison J. Rodger

Open Access Research article

Inpatient hospital fatality related to coding (ICD-9-CM) of the influenza diagnosis in Spain (2009–2015)

J. M. San-Román-Montero, R. Gil Prieto, C. Gallardo Pino, J. Hinojosa Mena, A. Zapatero Gaviria, A. Gil de Miguel

Open Access Research article

Diagnostic accuracy of in-house real-time PCR assay for Mycobacterium tuberculosis: a systematic review and meta-analysis

Zhenhong Wei, Xiaoping Zhang, Chaojun Wei, Liang Yao, Yonghong Li, Xiaojing Zhang, Hui Xu, Yanjuan Jia, Rui Guo, Yu Wu, Kehu Yang, Xiaoling Gao

Open Access Research article

Hepatitis C virus infection in Irish drug users and prisoners – a scoping review

D. Crowley, R. Murtagh, W. Cullen, J. S. Lambert, T. McHugh, M. C. Van Hout

Open Access Research article

Linkage to hepatitis C care after incarceration in jail: a prospective, single arm clinical trial

Matthew J. Akiyama, Devin Columbus, Ross MacDonald, Alison O. Jordan, Jessie Schwartz, Alain H. Litwin, Benjamin Eckhardt, Ellie Carmody

Open Access Case report

Multiple relapses of Plasmodium vivax malaria acquired from West Africa and association with poor metabolizer CYP2D6 variant: a case report

Xi He, Maohua Pan, Weilin Zeng, Chunyan Zou, Liang Pi, Yucheng Qin, Luyi Zhao, Pien Qin, Yuxin Lu, J. Kevin Baird, Yaming Huang, Liwang Cui, Zhaoqing Yang

Open Access Research article

HTLV-1 infection in solid organ transplant donors and recipients in Spain

Carmen de Mendoza, Lourdes Roc, Rafael Benito, Gabriel Reina, José Manuel Ramos, Cesar Gómez, Antonio Aguilera, Manuel Rodríguez-Iglesias, Juan García-Costa, Miriam Fernández-Alonso, Vicente Soriano, C. Rodríguez, M. Vera, J. del Romero, G. Marcaida, M. D. Ocete, E. Caballero, I. Molina, A. Aguilera, J. J. Rodríguez-Calviño, D. Navarro, C. Rivero, M. D. Vilariño, R. Benito, S. Algarate, J. Gil, R. Ortiz de Lejarazu, S. Rojo, J. M. Eirós, A. San Miguel, C. Manzardo, J. M. Miró, J. García, I. Paz, E. Poveda, E. Calderón, D. Escudero, M. Trigo, J. Diz, M. García-Campello, M. Rodríguez Iglesias, A. Hernández Betancor, A. M. Martín, J. M. Ramos, A. Gimeno, F. Gutiérrez, J. C. Rodríguez, V. Sánchez, C. Gómez Hernando, G. Cilla, E. Pérez Trallero, J. López Aldeguer, L. Fernández Pereira, J. Niubó, M. Hernández, A. M. López Lirola, J. L. Gómez Sirvent, L. Force, C. Cifuentes, S. Pérez, L. Morano, C. Raya, A. González Praetorius, J. L. Pérez, M. Peñaranda, S. Hernáez Crespo, J. M. Montejo, L. Roc, A. Martínez Sapiña, I. Viciana, T. Cabezas, A. Lozano, J. M. Fernández, I. García-Bermejo, G. Gaspar, R. García, M. Górgolas, C. Vegas, J. Blas, P. Miralles, M. Valeiro, T. Aldamiz, N. Margall, C. Guardia, E. do Pico, I. Polo, A. Aguinaga, C. Ezpeleta, S. Sauleda, M. Pirón, R. González, L. Barea, A. Jiménez, L. Blanco, A. Suárez, I. Rodríguez Avial, A. Pérez Rivilla, P. Parra, M. Fernández, M. Fernández Alonso, A. Treviño, S. Requena, L. Benítez Gutiérrez, V. Cuervas Mons, C. de Mendoza, P. Barreiro, V. Soriano, O. Corral, F. Gómez-Gallego

Open Access Case report

Dermatoscopy for the rapid diagnosis of Talaromyces marneffei infection: a case report

Jiayi Xian, Xiaowen Huang, Qiaofei Li, Xiaoming Peng, Xuebiao Peng

Open Access Research article

Long-lasting alterations in adipose tissue density and adiponectin production in people living with HIV after thymidine analogues exposure

Marco Gelpi, Andreas Dehlbæk Knudsen, Karoline Brostrup Larsen, Amanda Mocroft, Anne-Mette Lebech, Birgitte Lindegaard, Jens Lundgren, Klaus Fuglsang Kofoed, Susanne Dam Nielsen

Open Access Case report

Pleural fluid secondary to pulmonary cryptococcal infection: a case report and review of the literature

Yuan Zhang, Sean X. Zhang, Julie Trivedi, Adam D. Toll, Julie Brahmer, Russell Hales, Sarah Bonerigo, Mingying Zeng, Huiping Li, Rex C. Yung

Open Access Research article

VRE in cirrhotic patients

Melissa Barger, Emily Blodget, Sol Pena, Wendy Mack, Tse-Ling Fong

Open Access Research article

HCV-infected individuals have higher prevalence of comorbidity and multimorbidity: a retrospective cohort study

Curtis L. Cooper, Chrissi Galanakis, Jessy Donelle, Jeff Kwong, Rob Boyd, Lisa Boucher, Claire E. Kendall

Open Access Research article

Clinical benefits of FilmArray meningitis-encephalitis PCR assay in partially-treated bacterial meningitis in Israel

Yair Mina, Vered Schechner, Michal Savion, Dafna Yahav, Efraim Bilavsky, Nadav Sorek, Haim Ben-Zvi, Amos Adler

Open Access Research article

Incidence of tuberculosis among HIV infected individuals on long term antiretroviral therapy in private healthcare sector in Pune, Western India

Ameet Dravid, Kartik Natarajan, Mahenderkumar Medisetty, Raviraj Gawali, Uma Mahajan, Milind Kulkarni, Chinmay Saraf, Charuta Ghanekar, Sachin Kore, Niranjan Rathod, Mrudula Dravid

Open Access Research article

Gynecomastia in HIV-positive adult men receiving efavirenz-based antiretroviral therapy at Newlands clinic, Harare, Zimbabwe

Sandra Shawarira-Bote, Tinei Shamu, Cleophas Chimbetete

Open Access Research article

The diagnostic value of (1,3)-β-D-glucan alone or combined with traditional inflammatory markers in neonatal invasive candidiasis

Junfei Guo, Yongbing Wu, Weiming Lai, Weiming Lu, Xiaoping Mu

Open Access Research article

Linezolid resistant coagulase negative staphylococci (LRCoNS) with novel mutations causing blood stream infections (BSI) in India

Gajanand Mittal, Vasundhra Bhandari, Rajni Gaind, Vandana Rani, Shimpi Chopra, Reetika Dawar, Raman Sardana, P. K. Verma

Open Access Research article

Development of a bedside tool to predict the probability of drug-resistant pathogens among hospitalized adult patients with gram-negative infections

Thomas P. Lodise, Nicole Gidaya Bonine, Jiatao Michael Ye, Henry J. Folse, Patrick Gillard

Open Access Case report

Type A fulminant Clostridium perfringens sepsis indicated RBC/Hb discrepancy; a case report

Masahide Sakaue, Koshi Ota, Eriko Nakamura, Masahiko Nitta, Masahiro Oka, Yasuo Oishi, Yohei Sano, Shinya Yonogi, Akira Takasu

Open Access Case report

A case of pleural effusion caused by Mycobacterium fortuitum and Mycobacterium mageritense coinfection

Ryosuke Hirabayashi, Atsushi Nakagawa, Hiroshi Takegawa, Keisuke Tomii

Open Access Study protocol

Protocol for a multicenter, real-world study of HIV pre-exposure prophylaxis among men who have sex with men in China (CROPrEP)

Hongyi Wang, Yonghui Zhang, Zhu Mei, Yueru Jia, Sequoia I. Leuba, Jing Zhang, Zhenxing Chu, Haibo Ding, Yongjun Jiang, Wenqing Geng, Hong Shang, Junjie Xu

Open Access Case report

A case report of Coccidioides posadasii meningoencephalitis in an immunocompetent host

Raynell Lang, William Stokes, Jane Lemaire, Andrew Johnson, John Conly

Open Access Research article

A dynamic model and some strategies on how to prevent and control hepatitis c in mainland China

Wanru Jia, Jie Weng, Cong Fang, Yong Li

Open Access Research article

Factors associated with vaccination completion and retention among HIV negative female sex workers enrolled in a simulated vaccine efficacy trial in Kampala, Uganda

Yunia Mayanja, Andrew Abaasa, Gertrude Namale, Gershim Asiki, Matthew A. Price, Anatoli Kamali

Open Access Research article

Impact of nucleic acid amplification test on pulmonary tuberculosis notifications and treatments in Taiwan: a 7-year single-center cohort study

Chih-Wei Wu, Yao-Kuang Wu, Chou-Chin Lan, Mei-Chen Yang, Ting-Qian Dong, I-Shiang Tzeng, Shu-Shien Hsiao

Open Access Research article

Early syphilis: risk factors and clinical manifestations focusing on HIV-positive patients

Maider Arando, Candela Fernandez-Naval, Miriam Mota-Foix, Desi Martinez, Pere Armengol, Maria Jesús Barberá, Juliana Esperalba, Martí Vall-Mayans

Open Access Research article

Comparison of viral and epidemiological profiles of hospitalized children with severe acute respiratory infection in Beijing and Shanghai, China

Yanjie Zhao, Roujian Lu, Jun Shen, Zhengde Xie, Gaoshan Liu, Wenjie Tan

Open Access Case report

First case report of bacteremia caused by Solobacterium moorei in China, and literature review

Wen-Jing Liu, Meng Xiao, Jie Yi, Ying Li, Timothy Kudinha, Ying-Chun Xu

Open Access Study protocol

Validation of cellular tests for Lyme borreliosis (VICTORY) study

F. R. van de Schoor, M. E. Baarsma, S. A. Gauw, L. A. B. Joosten, B. J. Kullberg, C. C. van den Wijngaard, J. W. Hovius

Open Access Study protocol

The endTB observational study protocol: treatment of MDR-TB with bedaquiline or delamanid containing regimens

Uzma Khan, Helena Huerga, Aamir J. Khan, Carole D. Mitnick, Catherine Hewison, Francis Varaine, Mathieu Bastard, Michael Rich, Molly F. Franke, Sidney Atwood, Palwasha Y. Khan, Kwonjune J. Seung

Open Access Research article

Clinical profiles of early and tuberculosis-related mortality in South Korea between 2015 and 2017: a cross-sectional study

Jinsoo Min, Ju Sang Kim, Hyung Woo Kim, Ah Young Shin, Hyeon-Kyoung Koo, Sung-Soon Lee, Yang-Ki Kim, Kyeong-Cheol Shin, Jung Hyun Chang, Gayoung Chun, Joosun Lee, Mi Sun Park, Jae Seuk Park

Open Access Research article

Genetic diversity and epidemiology of Genogroup II noroviruses in children with acute sporadic gastroenteritis in Shanghai, China, 2012–2017

Lijuan Lu, Huaqing Zhong, Menghua Xu, Liyun Su, Lingfeng Cao, Ran Jia, Jin Xu

Open Access Research article

Assessing the efficacy and safety of magnesium sulfate for management of autonomic nervous system dysregulation in Vietnamese children with severe hand foot and mouth disease

Qui Tu Phan, Lam Khanh Phung, Khanh Huu Truong, Trieu Trung Huynh, Giang Thanh Phạm, Bich Ngọc Nguyen, Quyen Thanh Tran, Vuong Ngoc Thien Huynh, Tien Thi My Nguyen, Thoa Phan Kim Le, Nhan Nguyen Thanh Le, Saraswathy Sabanathan, H. Rogier van Doorn, Tan Van Le, Toan Duc Nguyen, Laura Merson, Dung Thi Phuong Nguyen, Ronald Geskus, Hung Thanh Nguyen, Chau Van Vinh Nguyen, Bridget Wills

Open Access Technical advance

Comparison of Sanger sequencing for hepatitis C virus genotyping with a commercial line probe assay in a tertiary hospital

Sylvie Goletti, Siméon Zuyten, Léonie Goeminne, Chris Verhofstede, Hector Rodriguez-Villalobos, Monique Bodeus, Peter Stärkel, Yves Horsmans, Benoît Kabamba-Mukadi

Open Access Research article

Persistence of cervical high-risk human papillomavirus in women living with HIV in Denmark – the SHADE

Kristina Thorsteinsson, Steen Ladelund, Merete Storgaard, Terese L. Katzenstein, Isik Somuncu Johansen, Gitte Pedersen, Frederikke Falkencrone Rönsholt, Lars Nørregård Nielsen, Lisbeth Nilas, Maria Franzmann, Niels Obel, Anne-Mette Lebech, Jesper Bonde

Open Access Research article

Trend of HIV transmitted drug resistance before and after implementation of HAART regimen restriction in the treatment of HIV-1 infected patients in southern Taiwan

Ya-Wei Weng, I-Tzu Chen, Hung-Chin Tsai, Kuan-Sheng Wu, Yu-Ting Tseng, Cheng-Len Sy, Jui-Kuang Chen, Susan Shin-Jung Lee, Yao-Shen Chen

Open Access Research article

Trends in resistant Enterobacteriaceae and Acinetobacter species in hospitalized patients in the United States: 2013–2017

Vikas Gupta, Gang Ye, Melanie Olesky, Kenneth Lawrence, John Murray, Kalvin Yu

Open Access Research article

Spatial and temporal patterns of dengue incidence in northeastern Thailand 2006–2016

Thipruethai Phanitchat, Bingxin Zhao, Ubydul Haque, Chamsai Pientong, Tipaya Ekalaksananan, Sirinart Aromseree, Kesorn Thaewnongiew, Benedicte Fustec, Michael J. Bangs, Neal Alexander, Hans J. Overgaard

Open Access Research article

Comparison of pleural effusion features and biomarkers between talaromycosis and tuberculosis in non-human immunodeficiency virus-infected patients

Ye Qiu, Wen Zeng, Hui Zhang, Xiaoning Zhong, Shudan Tang, Jianquan Zhang

Open Access Research article

Trends in antimicrobial resistance of bacterial pathogens in Harare, Zimbabwe, 2012–2017: a secondary dataset analysis

Marvellous Mhondoro, Nqobile Ndlovu, Bangure Donewell, Tsitsi Juru, Gombe Notion Tafara, Shambira Gerald, Nsubuga Peter, Tshimanga Mufuta

Open Access Research article

Evaluation of four rapid diagnostic tests for canine and human visceral Leishmaniasis in Colombia

Giovanny Herrera, Adriana Castillo, Martha S. Ayala, Carolina Flórez, Omar Cantillo-Barraza, Juan David Ramirez

Open Access Research article

Childhood tuberculosis and treatment outcomes in Accra: a retrospective analysis

Sally-Ann Ohene, Sarah Fordah, Prince Dela Boni

Open Access Research article

Systematic review of dengue vaccine efficacy

Lucia Teresa Côrtes da Silveira, Bernardo Tura, Marisa Santos

Open Access Research article

Assessing rates and contextual predictors of 5-year mortality among HIV-infected and HIV-uninfected individuals following HIV testing in Durban, South Africa

Ingrid V. Bassett, Ai Xu, Janet Giddy, Laura M. Bogart, Andrew Boulle, Lucia Millham, Elena Losina, Robert A. Parker

Open Access Research article

Surgical site infections after cesarean sections at the University Clinical Center of Kosovo: rates, microbiological profile and risk factors

Vjosa A. Zejnullahu, Rozalinda Isjanovska, Zana Sejfija, Valon A. Zejnullahu

Open Access Technical advance

Development of a combined RLEP/16S rRNA (RT) qPCR assay for the detection of viable M. leprae from nasal swab samples

Marcus Beissner, Anna Woestemeier, Malkin Saar, Kossi Badziklou, Issaka Maman, Charlotte Amedifou, Magdalena Wagner, Franz X. Wiedemann, Komi Amekuse, Basile Kobara, Karl-Heinz Herbinger, Abiba Banla Kere, Thomas Löscher, Gisela Bretzel

Open Access Research article

Risk factors for mortality in patients with Stenotrophomonas maltophilia bacteremia and clinical impact of quinolone–resistant strains

Eun Jin Kim, Yong Chan Kim, Jin Young Ahn, Su Jin Jeong, Nam Su Ku, Jun Yong Choi, Joon-Sup Yeom, Young Goo Song

Open Access Research article

The utility of endotracheal aspirate bacteriology in identifying mechanically ventilated patients at risk for ventilator associated pneumonia: a single-center prospective observational study

Ekaterina Kabak, Jana Hudcova, Zoltán Magyarics, Lukas Stulik, Marie Goggin, Valéria Szijártó, Eszter Nagy, Chris Stevens

Open Access Research article

Human metapneumovirus prevalence and patterns of subgroup persistence identified through surveillance of pediatric pneumonia hospital admissions in coastal Kenya, 2007–2016

John W. Oketch, Everlyn Kamau, Grieven P. Otieno, James R. Otieno, Charles N. Agoti, D. James Nokes

Open Access Research article

Association of TGF-ß1 polymorphisms and chronic hepatitis C infection: a Meta-analysis

Pengfei Guo, Shuangyin Liu, Xiangru Sun, Longqin Xu

Open Access Research article

Changing face of Candida colonization pattern in pediatric patients with hematological malignancy during repeated hospitalizations, results of a prospective observational study (2016–2017) in shiraz, Iran

Seyedeh Sedigheh Hamzavi, Ali Amanati, Parisa Badiee, Mohammad Rahim Kadivar, Hadis Jafarian, Fatemeh Ghasemi, Sezaneh Haghpanah, Mansooreh Dehghani, Abbas Norouzian Baghani

Open Access Research article

Presepsin as a diagnostic marker of sepsis in children and adolescents: a systemic review and meta-analysis

Seo Hee Yoon, Eun Hwa Kim, Ha Yan Kim, Jong Gyun Ahn

Open Access Research article

Pilot study for risk assessment of aspiration pneumonia based on oral bacteria levels and serum biomarkers

Tomotaka Nishizawa, Yuichi Niikura, Keiichi Akasaka, Masato Watanabe, Daisuke Kurai, Masako Amano, Haruyuki Ishii, Hidekazu Matsushima, Naomi Yamashita, Hajime Takizawa

Open Access Research article

A study of the relationship between human infection with avian influenza a (H5N6) and environmental avian influenza viruses in Fujian, China

Ping Chen, Jian-Feng Xie, Qi Lin, Lin Zhao, Yan-Hua Zhang, Hong-Bin Chen, Yu-Wei Weng, Zheng Huang, Kui-Cheng Zheng

Open Access Case report

Intracranial actinomycosis of odontogenic origin masquerading as auto-immune orbital myositis: a fatal case and review of the literature

G. J. Hötte, M. J. Koudstaal, R. M. Verdijk, M. J. Titulaer, J. F. H. M. Claes, E. M. Strabbing, A. van der Lugt, D. Paridaens

Open Access Research article

Characterization of non-tuberculous mycobacterial pulmonary disease in Nanjing district of China

Chunmei Hu, Lili Huang, Min Cai, Weixiao Wang, Xudong Shi, Wei Chen

Open Access Research article

Long-term retrospective observation reveals stabilities and variations of hantavirus infection in Hebei, China

Shiyou Liu, Yamei Wei, Xu Han, Yanan Cai, Zhanying Han, Yanbo Zhang, Yonggang Xu, Shunxiang Qi, Qi Li

Open Access Research article

A descriptive analysis of the Spatio-temporal distribution of intestinal infectious diseases in China

Ying Mao, Ning Zhang, Bin Zhu, Jinlin Liu, Rongxin He

Open Access Research article

Human immunodeficiency virus-associated tuberculosis care in Botswana: evidence from a real-world setting

Ley Muyaya Muyaya, Esperance Manwana Musanda, Jacques Lukenze Tamuzi

Open Access Research article

Antibacterial resistance in ophthalmic infections: a multi-centre analysis across UK care settings

Alice E. Lee, Kanchana Niruttan, Timothy M. Rawson, Luke S. P. Moore

Open Access Research article

Performance of prediction rules and guidelines in detecting serious bacterial infections among Tanzanian febrile children

Kristina Keitel, Mary Kilowoko, Esther Kyungu, Blaise Genton, Valérie D’Acremont

Open Access Research article

Lessons from an active surveillance pilot to assess the pneumonia of unknown etiology surveillance system in China, 2016: the need to increase clinician participation in the detection and reporting of emerging respiratory infectious diseases

Nijuan Xiang, Ying Song, Yu Wang, Jiabing Wu, Alexander J. Millman, Carolyn M. Greene, Zhentao Ding, Jie Sun, Wei Yang, Guoxia Guo, Ruirui Wang, Ping Guo, Zhixing Ren, Lei Gong, Pengpeng Xu, Suizan Zhou, Dan Lin, Daxin Ni, Zijian Feng, Qun Li

Open Access Research article

Measles outbreak in an office building in the crowded Metropolis of Beijing, China

Zhen Li, Zheng Zhang, Fang Wang, Rui Wei, Jianhong Zhao, Fang Liu

Open Access Research article

Efficacy of ceftazidime-avibactam in the treatment of infections due to Carbapenem-resistant Enterobacteriaceae

Basem M. Alraddadi, Mohammed Saeedi, Mohammed Qutub, Abeer Alshukairi, Ashraf Hassanien, Ghassan Wali

Open Access Research article

Multiplex qPCR facilitates identification of betaherpesviruses in patients with acute liver failure of unknown etiology

Jéssica Vasques Raposo, Arthur Daniel Rocha Alves, Alexandre dos Santos da Silva, Damião Carlos dos Santos, Juliana Gil Melgaço, Otacílio C. Moreira, Marcelo Alves Pinto, Vanessa Salete de Paula

Open Access Research article

DOES IT WORK? -a randomized controlled trial to test the efficacy of HCV and HIV-related education on drug users in MMT, China

Jing Ying Zhang, Zhi Bin Li, Lei Zhang, Jun Wang, Le Ping Huang, Gui Lai Zhan, Zhu Li, Jiang Du, Min Zhao

Open Access Research article

Long-term adherence to antiretroviral therapy in a South African adult patient cohort: a retrospective study

Atika Moosa, Tanuja N. Gengiah, Lara Lewis, Kogieleum Naidoo

Open Access Research article

Molecular characterization of human isolates of Strongyloides stercoralis and Rhabditis spp. based on mitochondrial cytochrome c oxidase subunit 1 (cox1)

Mandana Fadaei Tehrani, Meysam Sharifdini, Farzaneh Zahabiun, Robabeh Latifi, Eshrat Beigom Kia

Open Access Case report

Gangrenous gas necrosis of the spleen: a case report

Jeremy Meyer, Arnaud Dupuis, Benedikt D. Huttner, Matthieu Tihy, Léo Bühler

Open Access Research article

Development of a multiplex PCR to detect and discriminate porcine circoviruses in clinical specimens

Keli Yang, Zuwu Jiao, Danna Zhou, Rui Guo, Zhengying Duan, Yongxiang Tian

Open Access Research article

Genetic variants in Forkhead box O1 associated with predisposition to sepsis in a Chinese Han population

Huijuan Wang, Zhaohui Tong, Jia Li, Kun Xiao, Feifei Ren, Lixin Xie

Open Access Research article

Microbiological and clinical characteristics of Streptococcus gallolyticus subsp. pasteurianus infection in China

Yi Li, Xingchun Chen, Zhijun Zhang, Lijun Wang, Junrui Wang, Ji Zeng, Junwen Yang, Binghuai Lu

Open Access Research article

Echinococcus multilocularis inoculation induces NK cell functional decrease through high expression of NKG2A in C57BL/6 mice

Abuduaini Abulizi, Yingmei Shao, Tuerganaili Aji, Zhide Li, Chuanshan Zhang, Abudusalamu Aini, Hui Wang, Tuerhongjiang Tuxun, Liang Li, Ning Zhang, Renyong Lin, Hao Wen

Open Access Research article

HLA-B*57:01 allele prevalence in treatment-Naïve HIV-infected patients from Colombia

Ernesto Martínez Buitrago, José Millán Oñate, José Fernando García-Goez, Jorge Álvarez, William Lenis, Luz Marina Sañudo, Luisa Consuelo Rubiano

Open Access Research article

Estimating the impact of a novel drug regimen for treatment of tuberculosis: a modeling analysis of projected patient outcomes and epidemiological considerations

Emily A. Kendall, Shelly Malhotra, Sarah Cook-Scalise, Claudia M. Denkinger, David W. Dowdy

Open Access Research article

Achromobacter spp. healthcare associated infections in the French West Indies: a longitudinal study from 2006 to 2016

Karine Marion-Sanchez, Karine Pailla, Claude Olive, Xavier Le Coutour, Christian Derancourt

Open Access Case report

A case with neurological abnormalities caused by Rickettsia raoultii in northwestern China

Zhihui Dong, Yicheng Yang, Qian Wang, Songsong Xie, Shanshan Zhao, Wenbo Tan, Wumei Yuan, Yuanzhi Wang

Open Access Research article

High-volume workflow and performance comparisons for Chlamydia trachomatis and Neisseria gonorrhoeae testing using automated molecular platforms

André Frontzek, Gudrun Aretzweiler, Daniela Winkens, Dana Duncan, Elizabeth M. Marlowe

Open Access Research article

Pooled analysis of T2 Candida for rapid diagnosis of candidiasis

Dong-Lan Tang, Xiao Chen, Chang-Guo Zhu, Zhong-wei Li, Yong Xia, Xu-Guang Guo

Open Access Research article

High prevalence and heterogeneity of Dysglycemia in patients with tuberculosis from Peru: a prospective cohort study

Roger I. Calderon, Maria B. Arriaga, Kattya Lopez, Nadia N. Barreda, Oswaldo M. Sanabria, José F. Fróes Neto, Davi Neri Araújo, Leonid Lecca, Bruno B. Andrade

Open Access Research article

Changing epidemiology and antimicrobial resistance in Vibrio cholerae: AMR surveillance findings (2006–2016) from Nepal

Nisha Rijal, Jyoti Acharya, Shailaja Adhikari, Bishnu Psd Upadhaya, Geeta Shakya, Palpasa Kansakar, Piyush Rajbhandari

Open Access Research article

Inhibition of replication of hepatitis B virus using transcriptional repressors that target the viral DNA

Kristie Bloom, Haajira Kaldine, Toni Cathomen, Claudio Mussolino, Abdullah Ely, Patrick Arbuthnot

Open Access Research article

Prevalence of scabies and impetigo in the Solomon Islands: a school survey

Millicent H. Osti, Oliver Sokana, Sophie Phelan, Michael Marks, Margot J. Whitfeld, Christina Gorae, John M. Kaldor, Andrew C. Steer, Daniel Engelman

Open Access Research article

Environmental factors affecting childhood diarrheal disease among under-five children in Jamma district, South Wello zone, Northeast Ethiopia

Getachew Yismaw Workie, Temesgen Yihunie Akalu, Adhanom Gebreegziabher Baraki

Open Access Research article

Vaccination uptake among Australian early childhood education staff: assessing perceptions, behaviours and workplace practices

Holly Seale, Stephanie Dwyer, Alamgir Kabir, Rajneesh Kaur

Open Access Case report

A rare case of Colistin-resistant Salmonella Enteritidis meningitis in an HIV-seropositive patient

Roxanne Rule, Nontombi Mbelle, John Osei Sekyere, Marleen Kock, Anwar Hoosen, Mohamed Said

Open Access Research article

What happens after HIV self-testing? Results from a longitudinal cohort of Chinese men who have sex with men

Weiming Tang, Wenting Huang, Haidong Lu, Bolin Cao, Dan Wu, Jason Ong, Hongyun Fu, Ye Zhang, Bin Yang, Cheng Wang, Wei Ma, Chongyi Wei, Joseph D. Tucker

Open Access Research article

“Enterocytozoon bieneusi and Cryptosporidium: a cross-sectional study conducted throughout Thailand”

Rapeepun Prasertbun, Hirotake Mori, Yaowalark Sukthana, Supaluk Popruk, Teera Kusolsuk, Katsuro Hagiwara, Aongart Mahittikorn

Open Access Research article

Characterization of the hepatitis C virus epidemic in Pakistan

Sarwat Mahmud, Zaina Al Kanaani, Laith J. Abu-Raddad

Open Access Research article

Use of a mobile application for Ebola contact tracing and monitoring in northern Sierra Leone: a proof-of-concept study

Lisa O. Danquah, Nadia Hasham, Matthew MacFarlane, Fatu E. Conteh, Fatoma Momoh, Andrew A. Tedesco, Amara Jambai, David A. Ross, Helen A. Weiss

Open Access Research article

Hepatitis B infection in the general population of China: a systematic review and meta-analysis

Huai Wang, Peixuan Men, Yufeng Xiao, Pei Gao, Min Lv, Qianli Yuan, Weixin Chen, Shuang Bai, Jiang Wu

Open Access Research article

Molecular characteristics of group B Streptococcus isolates from infants in southern mainland China

Juan Li, Wenjing Ji, Kankan Gao, Haijian Zhou, Lihua Zhang, Xiaoping Mu, Chunlei Yuan, Xiaoshan Guan, Qiulian Deng, Lian Zhang, Huamin Zhong, Xiurong Gao, Fei Gao, Yan Long, Chien-Yi Chang, David J. McIver, Haiying Liu

Open Access Research article

Rubella transmission and the risk of congenital rubella syndrome in Liberia: a need to introduce rubella-containing vaccine in the routine immunization program

Abyot Bekele Woyessa, Mohammed Seid Ali, Tiala K. Korkpor, Roland Tuopileyi II, Henry T. Kohar, John Dogba, April Baller, Julius Monday, Suleman Abdullahi, Thomas Nagbe, Gertrude Mulbah, Mohammed Kromah, Jeremy Sesay, Kwuakuan Yealue, Tolbert Nyenswah, Mesfin Zbelo Gebrekidan

Open Access Study protocol

Community-led delivery of HIV self-testing to improve HIV testing, ART initiation and broader social outcomes in rural Malawi: study protocol for a cluster-randomised trial

Pitchaya P. Indravudh, Katherine Fielding, Moses K. Kumwenda, Rebecca Nzawa, Richard Chilongosi, Nicola Desmond, Rose Nyirenda, Cheryl C. Johnson, Rachel C. Baggaley, Karin Hatzold, Fern Terris-Prestholt, Elizabeth L. Corbett

Open Access Case report

Rapid development of HIV elite control in a patient with acute infection

Deirdre Morley, John S. Lambert, Louise E. Hogan, Cillian De Gascun, Niamh Redmond, Rachel L. Rutishauser, Cassandra Thanh, Erica A. Gibson, Kristen Hobbs, Sonia Bakkour, Michael P. Busch, Jeremy Farrell, Padraig McGetrick, Timothy J. Henrich

Open Access Case report

Infections due to Cellulosimicrobium species: case report and literature review

María Rivero, Javier Alonso, María Fernanda Ramón, Nancy Gonzales, Ana Pozo, Itxaso Marín, Ana Navascués, Regina Juanbeltz

Open Access Research article

Incidence and predictors of lost to follow-up among drug-resistant tuberculosis patients at University of Gondar Comprehensive Specialized Hospital, Northwest Ethiopia: a retrospective follow-up study

Getahun Molla Kassa, Alemayehu Shimeka Teferra, Haileab Fekadu Wolde, Atalay Goshu Muluneh, Mehari Woldemariam Merid

Open Access Research article

Intensive phase treatment outcome and associated factors among patients treated for multi drug resistant tuberculosis in Ethiopia: a retrospective cohort study

Teklu Molie, Zelalem Teklemariam, Eveline Klinkenberg, Yadeta Dessie, Andargachew Kumsa, Hussen Mohammed, Adisalem Debebe, Dawit Assefa, Abebe Habte, Ahmed Bedru, Daniel Fiseha, Berhanu Seyoum

Open Access Research article

Nontuberculous mycobacteria isolated from specimens of pulmonary tuberculosis suspects, Northern Tunisia: 2002–2016

Reem Gharbi, Besma Mhenni, Saloua Ben Fraj, Helmi Mardassi

Open Access Research article

Association between lipodystrophy and length of exposure to ARTs in adult HIV-1 infected patients in Montreal

Ahmad Alikhani, Helene Morin, Stephanie Matte, Pouriya Alikhani, Cécile Tremblay, Madeleine Durand

Open Access Research article

Screening HIV-positive men who have sex with men for hepatitis C re-infection risk: is a single question on condom-use enough? A sensitivity analysis

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Open Access Study protocol

A cluster-randomised controlled trial comparing school and community-based deworming for soil transmitted helminth control in school-age children: the CoDe-STH trial protocol

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Harold Marcotte, Per Göran Larsson, Kasper Krogh Andersen, Fanglei Zuo, Lasse Sommer Mikkelsen, Erik Brandsborg, Glenda Gray, Fatima Laher, Kennedy Otwombe

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Xiaorong Guo, Dong Yang, Ruchun Liu, Yaman Li, Qingqing Hu, Xinrui Ma, Yelan Li, Heng Zhang, Xixing Zhang, Benhua Zhao, Tianmu Chen

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Four-color multiplex real-time PCR assay prototype targeting azithromycin resistance mutations in Mycoplasma genitalium

Olivier Thellin, Benaïssa Elmoualij, Willy Zorzi, Jorgen S. Jensen, Renaud Close, Valerie Deregowski, Muriel Le Guern Fellous, Pascale Quatresooz

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Forecasting incidence of hand, foot and mouth disease using BP neural networks in Jiangsu province, China

Wendong Liu, Changjun Bao, Yuping Zhou, Hong Ji, Ying Wu, Yingying Shi, Wenqi Shen, Jing Bao, Juan Li, Jianli Hu, Xiang Huo

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Risk factors and survival of patients infected with carbapenem-resistant Klebsiella pneumoniae in a KPC endemic setting: a case-control and cohort study

Astrid V. Cienfuegos-Gallet, Ana M. Ocampo de Los Ríos, Patricia Sierra Viana, Faiver Ramirez Brinez, Carlos Restrepo Castro, Gustavo Roncancio Villamil, Helena del Corral Londoño, J. Natalia Jiménez

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Past history of stage I/II solid tumor malignancy impacts considerably on sepsis mortality: a propensity score matching analysis from the hellenic sepsis study group

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Andreas Mueller, Antje Fuss, Uwe Ziegler, Godfrey M. Kaatano, Humphrey D. Mazigo

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Anneleen Berende, Joost Agelink van Rentergem, Andrea W. M. Evers, Hadewych J. M. ter Hofstede, Fidel J. Vos, Bart Jan Kullberg, Roy P. C. Kessels

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Open Access Research article

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Open Access Case report

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Open Access Study protocol

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Peter MacPherson, Emily L. Webb, Ebrahim Variava, Sanjay G. Lala, Minja Milovanovic, Andrew Ratsela, Limakatso Lebina, Anthony Kinghorn, Neil A. Martinson

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CD40 polymorphisms were associated with HCV infection susceptibility among Chinese population

Ting Tian, Peng Huang, Jingjing Wu, Chunhui Wang, Haozhi Fan, Yun Zhang, Rongbin Yu, Chao Wu, Xueshan Xia, Zuqiang Fu, Jun Li, Ming Yue

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Pedro Surriabre, Andrea Torrico, Tania Vargas, Fuantina Ugarte, Patricia Rodriguez, Véronique Fontaine

Open Access Research article

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Ni Wang, Hui Zhang, Yang Zhou, Hui Jiang, Bing Dai, Miaomiao Sun, Ying Li, Amelia Kinter, Fei Huang

Open Access Case report

Case report: chronic relapsing cryptococcal meningitis in a patient with low mannose-binding lectin and a low naïve CD4 cell count

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An outbreak of Salmonella Saintpaul in a Scottish childcare facility: the influence of parental under-reporting

Rachel M. Thomson, Hazel J. Henderson, Alison Smith-Palmer

Open Access Case report

Histological evidence for the cardiac safety of high-dose pegylated liposomal doxorubicin in a patient with HIV-associated Kaposi sarcoma: a case report and literature review

Ayaka Ishihara, Shuji Hatakeyama, Jun Suzuki, Yusuke Amano, Teppei Sasahara, Masaki Toshima, Yuji Morisawa

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A case report of visceral leishmaniasis and malaria co-infection with pancytopenia and splenomegaly - a diagnostic challenge

Pragya Gautam Ghimire, Prasanna Ghimire, Jyoti Adhikari, Anurag Chapagain

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Open Access Research article

First insights into the genetic characteristics and drug resistance of Mycobacterium tuberculosis population collected during the first national tuberculosis prevalence survey of Lao PDR (2010–2011)

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Open Access Research article

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Open Access Research article

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Helina Fikre Tamiru, Yohana James Mashalla, Rezika Mohammed, Gloria Thupayagale Tshweneagae

Open Access Correction

Correction to: Detection of Mycobacterium tuberculosis in pediatric stool samples using TruTip technology

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Open Access Case report

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Open Access Research article

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Diederik A. H. Brandwagt, Arie van der Ende, Wilhelmina L. M. Ruijs, Hester E. de Melker, Mirjam J. Knol

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Ilya R. Fischhoff, Sarah E. Bowden, Felicia Keesing, Richard S. Ostfeld

Open Access Case report

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Christina S. Thornton, Oscar Larios, Jennifer Grossman, Thomas P. Griener, Steven Vaughan

Open Access Case report

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Ciara O’Connor, Aedin Collins, Eilish Twomey, Conor Hensey, John Caird, Patrick J. Gavin

Open Access Case report

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Open Access Case report

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Open Access Case report

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Xuehan Li, Tao Huang, Kai Xu, Chenglin Li, Yirong Li

Open Access Case report

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Lynnette Bhebhe, Motswedi Anderson, Sajini Souda, Wonderful T. Choga, Edward Zumbika, Zachary M. Shaver, Tshepiso Mbangiwa, Bonolo B. Phinius, Chabeni C. Banda, Pinkie Melamu, Rosemary M. Musonda, Max Essex, Jason T. Blackard, Sikhulile Moyo, Simani Gaseitsiwe

Open Access Research article

Molecular characterization of Blastocystis subtypes in HIV-positive patients and evaluation of risk factors for colonization

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Open Access Correction

Correction to: Rapid development of HIV elite control in a patient with acute infection

Deirdre Morley, John S. Lambert, Louise E. Hogan, Cillian De Gascun, Niamh Redmond, Rachel L. Rutishauser, Cassandra Thanh, Erica A. Gibson, Kristen Hobbs, Sonia Bakkour, Michael P. Busch, Jeremy Farrell, Padraig McGetrick, Timothy J. Henrich

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The liver fibrosis index is superior to the APRI and FIB-4 for predicting liver fibrosis in chronic hepatitis B patients in China

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Open Access Research article

Bacterial vaginosis, vulvovaginal candidiasis and trichomonal vaginitis among reproductive-aged women seeking primary healthcare in Sana’a city, Yemen

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Laure Brigitte Kouitcheu Mabeku, Bertrand Eyoum Bille, Cromwell Tepap Zemnou, Lionel Danny Tali Nguefack, Hubert Leundji

Open Access Case report

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Open Access Case report

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Yu-Wen Chien, Tzu-Chuan Ho, Pei-Wen Huang, Nai-Ying Ko, Wen-Chien Ko, Guey Chuen Perng

Open Access Case report

Knee septic arthritis caused by α-hemolytic Streptococcus in a patient with a recent history of knee arthroscopy: a case report

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Identifying high risk areas of Zika virus infection by meteorological factors in Colombia

Lung-Chang Chien, Francisco Sy, Adriana Pérez

Open Access Correction

Correction to: HCV-infected individuals have higher prevalence of comorbidity and multimorbidity: a retrospective cohort study

Curtis L. Cooper, Chrissi Galanakis, Jessy Donelle, Jeffery C. Kwong, Rob Boyd, Lisa Boucher, Claire E. Kendall

Open Access Research article

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Open Access Case report

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Open Access Correspondence

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Open Access Case report

Case report: whole genome sequencing based investigation of maternal-neonatal listeriosis in Sichuan, China

Lijuan Luo, Xi Chen, Michael Payne, Xiaolong Cao, Yan Wang, Jie Zhang, Jianping Deng, Hong Wang, Zhengdong Zhang, Qun Li, Ruiting Lan, Changyun Ye

Open Access Technical advance

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Exploring Leishmania infantum cathepsin as a new molecular marker for phylogenetic relationships and visceral leishmaniasis diagnosis

Ryan Emiliano da Silva, Bruna Matarucco Sampaio, Renata Tonhosolo, Andrea Perei ra da Costa, Luiz Eduardo da Silva Costa, Fernanda Ap. Nieri-Bastos, Márcia Aparecida Sperança, Arlei Marcili

Open Access Research article

HCV and HBV prevalence based on home blood self-sampling and screening history in the general population in 2016: contribution to the new French screening strategy

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Chromosomal and plasmid-mediated fluoroquinolone resistance in human Salmonella enterica infection in Ghana

Godfred Acheampong, Michael Owusu, Alex Owusu-Ofori, Isaac Osei, Nimako Sarpong, Augustina Sylverken, Hung-Jui Kung, Shu-Ting Cho, Chih-Horng Kuo, Se Eun Park, Florian Marks, Yaw Adu-Sarkodie, Ellis Owusu-Dabo

Open Access Research article

Prevalence of and risk factors for methicillin-resistant Staphylococcus aureus nasal carriage in the West of Iran: a population-based cross-sectional study

Elham Ahmadi, Mohammad Khojasteh, Seyed Mohammad Mortazavi, Fatemeh Khan-Mohammadi, Ali Kazemnia, Javad Beheshtipour, Mahdieh Raeeszadeh

Open Access Research article

Active immunoprophyilaxis with uromune® decreases the recurrence of urinary tract infections at three and six months after treatment without relevant secondary effects

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Open Access Research article

Bayesian modeling of spatiotemporal patterns of TB-HIV co-infection risk in Kenya

Verrah Otiende, Thomas Achia, Henry Mwambi

Open Access Research article

Clinical characteristics of acute Q fever patients in South Korea and time from symptom onset to serologic diagnosis

Jung Yeon Heo, Young Wha Choi, Eun Jin Kim, Seung Hun Lee, Seung Kwan Lim, Seon Do Hwang, Ju Young Lee, Hye Won Jeong

Open Access Correction

Correction to: Public health impact and cost effectiveness of routine childhood vaccination for hepatitis a in Jordan: a dynamic model approach

Wail A. Hayajneh, Vincent J. Daniels, Cerise K. James, Muhammet Nabi Kanıbir, Matthew Pilsbury, Morgan Marks, Michelle G. Goveia, Elamin H. Elbasha, Erik Dasbach, Camilo J. Acosta

Open Access Case report

Direct-from-blood RNA sequencing identifies the cause of post-bronchoscopy fever

Emily R. Ko, Casandra W. Philipson, Thomas W. Burke, Regina Z. Cer, Kimberly A. Bishop-Lilly, Logan J. Voegtly, Ephraim L. Tsalik, Christopher W. Woods, Danielle V. Clark, Kevin L. Schully

Open Access Research article

Disparities in access to and use of HIV-related health services in the Netherlands by migrant status and sexual orientation: a cross-sectional study among people recently diagnosed with HIV infection

Janneke P. Bil, Freke R. Zuure, Debora Alvarez-del Arco, Jan M. Prins, Kees Brinkman, Eliane Leyten, Ard van Sighem, Fiona Burns, Maria Prins

Open Access Research article

Nutritional intakes and associated factors among tuberculosis patients: a cross-sectional study in China

Zhewen Ren, Fei Zhao, Hui Chen, Dongmei Hu, Wentao Yu, Xiaoli Xu, Dingwen Lin, Fuyi Luo, Yueling Fan, Haijun Wang, Jun Cheng, Liyun Zhao

Open Access Research article

Population structure of drug-resistant Mycobacterium tuberculosis in Central Asia

Anna Engström, Uladzimir Antonenka, Abdylat Kadyrov, Gulmira Kalmambetova, Katharina Kranzer, Matthias Merker, Olim Kabirov, Nargiza Parpieva, Asliddin Rajabov, Evgeni Sahalchyk, Zayniddin Sayfudtinov, Stefan Niemann, Harald Hoffmann

Open Access Research article

A foodborne outbreak of gastroenteritis caused by Norovirus and Bacillus cereus at a university in the Shunyi District of Beijing, China 2018: a retrospective cohort study

Dongwan Chen, Yongjin Li, Jinchang Lv, Xiufeng Liu, Peng Gao, Guoxin Zhen, Wenzeng Zhang, Dan Wu, Hongbo Jing, Ying Li, Yao Zhao, Xiaochen Ma, Huilai Ma, Lijie Zhang

Open Access Case report

Two cases of fungal cyst infection in ADPKD: is this really a rare complication?

Laura Onuchic, Victor Augusto Hamamoto Sato, Precil Diego Miranda de Menezes Neves, Bruno Eduardo Pedroso Balbo, Antônio Abel Portela-Neto, Fernanda Trani Ferreira, Elieser Hitoshi Watanabe, Andreia Watanabe, Maria Cláudia Stockler de Almeida, Leonardo de Abreu Testagrossa, Pedro Renato Chocair, Luiz Fernando Onuchic

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Bixing Huang, Nic West, Jelena Vider, Ping Zhang, Rebecca E. Griffiths, Ernst Wolvetang, Peter Burtonclay, David Warrilow

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Open Access Correction

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Open Access Case report

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Open Access Research article

Spatial distribution and temporal trends of leprosy in Uganda, 2012–2016: a retrospective analysis of public health surveillance data

Freda Loy Aceng, Herman-Joseph Kawuma, Robert Majwala, Maureen Lamunu, Alex Riolexus Ario, Frank Mugabe Rwabinumi, Julie R. Harris, Bao-ping Zhu

Open Access Research article

Clinical prediction and diagnosis of neurosyphilis in HIV-negative patients: a case-control study

Yong Lu, Wujian Ke, Ligang Yang, Zhenyu Wang, Ping Lv, Jing Gu, Chun Hao, Jinghua Li, Yumao Cai, Mei Gu, Hongfang Liu, Wenjing Chen, Xiaohui Zhang, Liuyuan Wang, Yahui Liu, Bin Yang, Huachun Zou, Heping Zheng

Open Access Research article

Etiology of childhood diarrhoea among under five children and molecular analysis of antibiotic resistance in isolated enteric bacterial pathogens from a tertiary care hospital, Eastern Odisha, India

Sonam S. Moharana, Rakesh K. Panda, Muktikesh Dash, Nirupama Chayani, Priyanka Bokade, Sanghamitra Pati, Debdutta Bhattacharya

Open Access Research article

Elimination of hepatitis C virus in Germany: modelling the cost-effectiveness of HCV screening strategies

Christian Krauth, Siegbert Rossol, Gustaf Ortsäter, Achim Kautz, Kathrin Krüger, Babette Herder, Jona Theodor Stahmeyer

Open Access Research article

Mechanistic study of the cause of decreased blood 1,25-Dihydroxyvitamin D in sepsis

Chih-Huang Li, Xiaolei Tang, Samiksha Wasnik, Xiaohua Wang, Jintao Zhang, Yi Xu, Kin-Hing William Lau, H. Bryant Nguyen, David J. Baylink

Open Access Research article

Molecular and evolutionary characterization of norovirus GII.17 in the northern region of Brazil

Larissa Cristina Prado das Neves Costa, Dielle Monteiro Teixeira, Ana Caroline Rodrigues Portela, Ian Carlos Gomes de Lima, Renato da Silva Bandeira, Edivaldo Costa Sousa Júnior, Jones Anderson Monteiro Siqueira, Hugo Reis Resque, Luciana Damascena da Silva, Yvone Benchimol Gabbay

Open Access Research article

High prevalence of HIV, HBsAg and anti-HCV positivity among people who injected drugs: results of the first bio-behavioral survey using respondent-driven sampling in two urban areas in Mozambique

Cynthia Semá Baltazar, Roberta Horth, Makini Boothe, Isabel Sathane, Peter Young, Denise Chitsondzo Langa, Manuel Condula, Helena Ricardo, Liliana Dengo Baloi, Beverley Cummings, Nicolas Schaad, Lídia Gouveia, Eugénia Teodoro, Henry F. Raymond

Open Access Research article

Nasopharyngeal carriage, spa types and antibiotic susceptibility profiles of Staphylococcus aureus from healthy children less than 5 years in Eastern Uganda

David Patrick Kateete, Benon B. Asiimwe, Raymond Mayanja, Brian Mujuni, Freddie Bwanga, Christine F. Najjuka, Karin Källander, Elizeus Rutebemberwa

Open Access Research article

Determinants of first line antiretroviral therapy treatment failure among adult patients on ART at central Ethiopia: un-matched case control study

Diriba Mulisa, Mulugeta Tesfa, Getachew Mullu Kassa, Tadesse Tolossa

Open Access Research article

Piperaquine concentration and malaria treatment outcomes in Ugandan children treated for severe malaria with intravenous Artesunate or quinine plus Dihydroartemisinin-Piperaquine

Pauline Byakika-Kibwika, Ronald Ssenyonga, Mohammed Lamorde, Daniel Blessborn, Joel Tarning

Open Access Research article

Seroprevalence of viral hepatitis A, B, C, D and E viruses in the Hormozgan province southern Iran

Mohammad Amin Behzadi, Victor Hugo Leyva-Grado, Mandana Namayandeh, Atoosa Ziyaeyan, Roya Feyznezhad, Hedayat Dorzaban, Marzieh Jamalidoust, Mazyar Ziyaeyan

Open Access Research article

Measuring the in-hospital costs of Pseudomonas aeruginosa pneumonia: methodology and results from a German teaching hospital

Klaus Kaier, Thomas Heister, Tim Götting, Martin Wolkewitz, Nico T. Mutters

Open Access Research article

Weather effects on hand, foot, and mouth disease at individual level: a case-crossover study

Zhicheng Du, Shao Lin, Tia Marks, Wangjian Zhang, Te Deng, Shicheng Yu, Yuantao Hao

Open Access Research article

Cytomegalovirus infection in HIV-infected patients in the era of combination antiretroviral therapy

R. Perello, A. Vergara, E. Monclus, S. Jimenez, M. Montero, N. Saubi, A. Moreno, Y. Eto, A. Inciarte, J. Mallolas, E. Martínez, M. A. Marcos

Open Access Research article

Inhibition of type I interferon signaling abrogates early Mycobacterium bovis infection

Jie Wang, Tariq Hussain, Kai Zhang, Yi Liao, Jiao Yao, Yinjuan Song, Naveed Sabir, Guangyu Cheng, Haodi Dong, Miaoxuan Li, Jiamin Ni, Mazhar Hussain Mangi, Deming Zhao, Xiangmei Zhou

Open Access Research article

Burden of anemia and its association with HAART in HIV infected children in Ethiopia: a systematic review and meta-analysis

Fasil Wagnew, Setegn Eshetie, Animut Alebel, Cheru Tesema, Getiye Dejenu Kibret, Alemu Gebrie, Getenet Dessie, Amanuel Alemu Abajobir

Open Access Study protocol

Protocol, rationale and design of PEOPLE (Post ExpOsure Prophylaxis for LEprosy in the Comoros and Madagascar): a cluster randomized trial on effectiveness of different modalities of implementation of post-exposure prophylaxis of leprosy contacts

Nimer Ortuno-Gutierrez, Assoumani Younoussa, Andriamira Randrianantoandro, Sofie Braet, Bertrand Cauchoix, Stéphanie Ramboarina, Abdallah Baco, Aboubacar Mzembaba, Zahara Salim, Mohamed Amidy, Saverio Grillone, Jan Hendrik Richardus, Bouke C. de Jong, Epco Hasker

Open Access Case report

A case report of Talaromyces marneffei Oro-pharyngo-laryngitis: a rare manifestation of Talaromycosis

Thanyarak Wongkamhla, Piriyaporn Chongtrakool, Anupop Jitmuang

Open Access Correction

Correction to: Systematic review and meta-analysis of tick-borne disease risk factors in residential yards, neighborhoods, and beyond

Ilya R. Fischhoff, Sarah E. Bowden, Felicia Keesing, Richard S. Ostfeld

Open Access Research article

Evaluation of the relationship between IL-12, IL-13 and TNF-α gene polymorphisms with the susceptibility to brucellosis: a case control study

Sima Kazemi, Asad Vaisi-Raygani, Fariba Keramat, Massoud Saidijam, Ali Reza Soltanian, Mahdi Alahgholi-Hajibehzad, Seyed Hamid Hashemi, Mohammad Yousef Alikhani

Open Access Research article

Incidence, clinical implications and impact on public health of infections with Shigella spp. and entero-invasive Escherichia coli (EIEC): results of a multicenter cross-sectional study in the Netherlands during 2016–2017

Maaike J. C. van den Beld, Esther Warmelink, Alexander W. Friedrich, Frans A. G. Reubsaet, Maarten Schipper, Richard F. de Boer, Daan W. Notermans, Mariska W. F. Petrignani, Evert van Zanten, John W. A. Rossen, Ingrid H. M. Friesema, A. M. D. ( Mirjam) Kooistra-Smid, A. P. van Dam, S. Svraka-Latifovic, A. M. D. Kooistra-Smid, J. J. Verweij, L. E. S. Bruijnesteijn van Coppenraet, K. Waar, M. Hermans, D. L. J. Hess, L. J. M. van Mook, A. M. C. Bergmans, R. R. Jansen, J. H. B. van de Bovenkamp, A. A. Demeulemeester, E. Reinders, C. F. M. Linssen

Open Access Research article

Associated factors in distinguishing patients with brucellosis from suspected cases

Jingjing Luo, Huixin Yang, Fangfang Hu, Siwen Zhang, Taijun Wang, Qian Zhao, Ruize Wang, Qing Zhen

Open Access Research article

Systemic RAGE ligands are upregulated in tuberculosis individuals with diabetes co-morbidity and modulated by anti-tuberculosis treatment and metformin therapy

Nathella Pavan Kumar, Kadar Moideen, Arul Nancy, Vijay Viswanathan, Basavaradhya S. Shruthi, Shanmugam Sivakumar, Syed Hissar, Hardy Kornfeld, Subash Babu

Open Access Research article

The European gonococcal antimicrobial surveillance programme (Euro-GASP) appropriately reflects the antimicrobial resistance situation for Neisseria gonorrhoeae in the European Union/European Economic Area

Michelle J. Cole, Chantal Quinten, Susanne Jacobsson, Michaela Day, Andrew J. Amato-Gauci, Neil Woodford, Gianfranco Spiteri, Magnus Unemo, Angelika Stary, Maria Haller, Ruth Verbrugge, Tania Crucitti, Soteroulla Soteriou, Despo Pieridou, Susan Cowan, Steen Hoffmann, Jevgenia Epstein, Jelena Viktorova, Ndeindo Ndeikoundam, Agathe Goubard, Peter Kohl, Susanne Buder, Viviane Bremer, Eva Tzelepi, Vasileia Konte, Eszter Balla, Mária Dudás, Guðrún Sigmundsdóttir, Guðrún Svanborg Hauksdóttir, Derval Igoe, Brendan Crowley, Barbara Suligoi, Paola Stefanelli, Gatis Pakarna, Violeta Mavcutko, Christopher Barbara, Jackie Maistre Melillo, Alje Van Dam, Birgit Van Benthem, Ineke Linde, Hilde Kløvstad, Thea Bergheim, Slawomir Majewski, Beata Mlynarczyk-Bonikowska, Jacinta Azevedo, Maria José Borrego, Peter Pavlik, Peter Truska, Irena Klavs, Samo Jeverica, Julio Vazquez, Mercedes Diez, Inga Velicko, Magnus Unemo, Gwenda Hughes, Kirstine Eastick

Open Access Research article

Anatomical site prevalence and genotypes of Chlamydia trachomatis infections among men who have sex with men: a multi-site study in China

Ying Zhou, Yu-Mao Cai, Shi-Liang Li, Ning-Xiao Cao, Xiao-Feng Zhu, Feng Wang, Yan Han, Yue-Ping Yin, Xiang-Sheng Chen

Open Access Research article

Comparison of an in house and a commercial real-time polymerase chain reaction targeting Toxoplasma gondii RE gene using various samples collected from patients in Turkey

Mert Döşkaya, Hüsnü Pullukçu, Muhammet Karakavuk, Esra Atalay Şahar, Mehmet Sezai Taşbakan, Meltem Işıkgöz Taşbakan, Mümtaz Yılmaz, Hüseyin Can, Aysu Değirmenci Döşkaya, Adnan Yüksel Gürüz

Open Access Research article

Analysis of factors associated with dropping-out from HIV antiretroviral therapy in Kunming City, China

Bin Liao, Xiao-Wen Zhang, Jing-Ying Wang, Jun Liu, Jun Liang, Wen-Jie He, Biao Hong, Yi Li

Open Access Debate

Biosafety and biosecurity requirements for Orientia spp. diagnosis and research: recommendations for risk-based biocontainment, work practices and the case for reclassification to risk group 2

Stuart D. Blacksell, Matthew T. Robinson, Paul N. Newton, Soiratchaneekorn Ruanchaimun, Jeanne Salje, Tri Wangrangsimakul, Matthew D. Wegner, Mohammad Yazid Abdad, Allan M. Bennett, Allen L. Richards, John Stenos, Nicholas P. J. Day

Open Access Research article

High Mycoplasma pneumoniae loads and persistent long-term Mycoplasma pneumoniae DNA in lower airway associated with severity of pediatric Mycoplasma pneumoniae pneumonia

Jinrong Liu, Fei Zhao, Jie Lu, Hui Xu, Hui Liu, Xiaolei Tang, Haiming Yang, Jianzhong Zhang, Shunying Zhao

Open Access Research article

Association of CMV genomic mutations with symptomatic infection and hearing loss in congenital CMV infection

G. Clement Dobbins, Amit Patki, Dongquan Chen, Hemant K. Tiwari, Curtis Hendrickson, William J. Britt, Karen Fowler, Jake Y. Chen, Suresh B. Boppana, Shannon A. Ross

Open Access Research article

Multicenter evaluation of TB-SPRINT 59-Plex Beamedex®: accuracy and cost analysis

Regina Bones Barcellos, Isabela Neves de Almeida, Elisangela Costa da Silva, Harrison Magdinier Gomes, Lida Jouca de Assis Figueredo, Maria Laura Halon, Elis Regina Dalla Costa, Ícaro Rodrigues dos Santos, Maria Cláudia Vater, Suely Alves, Wânia da Silva Carvalho, Philip Suffys, Christophe Sola, Silvana Spíndola de Miranda, Maria Lucia Rossetti, Afrânio Kritski

Open Access Research article

Mutation in MPT64 gene influencing diagnostic accuracy of SD Bioline assay (capilia)

Kamal Singh, Richa Kumari, Rajneesh Tripathi, Ankush Gupta, Shampa Anupurba

Open Access Research article

First-line antibiotic susceptibility pattern of toxigenic Corynebacterium diphtheriae in Indonesia

Dominicus Husada, Sugi Deny Pranoto Soegianto, Indra Suwarin Kurniawati, Adi Pramono Hendrata, Eveline Irawan, Leny Kartina, Dwiyanti Puspitasari, Parwati Setiono Basuki, Ismoedijanto

Open Access Research article

Perceived barriers and enablers for preventing the spread of carbapenem producing gram-negative bacteria during patient transfers: a mixed methods study among healthcare providers

Eline van Dulm, Wendy van der Veldt, Katja Jansen-van der Meiden, Gerry van Renselaar, Lian Bovée, Jeanette Ros, Udi Davidovich, Yvonne van Duijnhoven

Open Access Case report

An AIDS patient with urine retention

Lijun Xu, Ran Tao, Qiyu Zhao, Jinlin Cheng, Biao Zhu

Open Access Research article

Associations between echocardiographic manifestations and bacterial species in patients with infective endocarditis: a cohort study

A. Damlin, K. Westling, E. Maret, C. Stålsby Lundborg, K. Caidahl, M. J. Eriksson

Open Access Research article

FcγRIIIa receptor polymorphism influences NK cell mediated ADCC activity against HIV

Sneha Pramod Talathi, Nawaj Najir Shaikh, Sudhanshu Shekhar Pandey, Vandana Ashish Saxena, Megha Sunil Mamulwar, Madhuri Rajeev Thakar

Open Access Research article

Low serum estradiol levels are related to Mycobacterium avium complex lung disease: a cross-sectional study

Yoshifumi Uwamino, Tomoyasu Nishimura, Yasunori Sato, Eiko Tamizu, Takanori Asakura, Shunsuke Uno, Masaaki Mori, Hiroshi Fujiwara, Makoto Ishii, Hiroshi Kawabe, Mitsuru Murata, Naoki Hasegawa

Open Access Research article

Prepared for PrEP: preferences for HIV pre-exposure prophylaxis among Chinese men who have sex with men in an online national survey

Wenting Huang, Dan Wu, Jason J. Ong, M. Kumi Smith, Fan Yang, Hongyun Fu, Weiming Tang, Joseph D. Tucker

Open Access Research article

Tuberculosis treatment outcomes among people living with HIV diagnosed using Xpert MTB/RIF versus sputum-smear microscopy in Botswana: a stepped-wedge cluster randomised trial

Tefera Agizew, Violet Chihota, Sambayawo Nyirenda, Zegabriel Tedla, Andrew F. Auld, Unami Mathebula, Anikie Mathoma, Rosanna Boyd, Anand Date, Sherri L. Pals, Phenyo Lekone, Alyssa Finlay

Open Access Case report

Intratracheal myiasis followed by tracheal-esophageal fistula: report of a rare case and literature review

Huang Wendi, Chao Zeng, Weidong Song, Ping Xu

Open Access Research article

Clinical relevance of pulmonary non-tuberculous mycobacterial isolates in three reference centres in Belgium: a multicentre retrospective analysis

Yannick Vande Weygaerde, Nina Cardinaels, Peter Bomans, Taeyang Chin, Jerina Boelens, Emmanuel André, Eva Van Braeckel, Natalie Lorent

Open Access Study protocol

The Safe Start trial to assess the effect of an infant hygiene intervention on enteric infections and diarrhoea in low-income informal neighbourhoods of Kisumu, Kenya: a study protocol for a cluster randomized controlled trial

Jane Mumma, Sheillah Simiyu, Evalyne Aseyo, John Anderson, Alexandra Czerniewska, Elizabeth Allen, Robert Dreibelbis, Kelly K. Baker, Oliver Cumming

Open Access Research article

Human papillomavirus genotypes and P16INK4A expression in squamous penile carcinoma in Mexican patients

Cecilia Martínez-Bailón, Alejandra Mantilla-Morales, Galo Méndez-Matías, Isabel Alvarado-Cabrero, Rogelio Maldonado-Rodríguez, Joel Quintero-Becerra, Rafael Arias-Flores, Patricia Piña-Sánchez

Open Access Research article

Evaluation of GeneXpert MTB/RIF system performances in the diagnosis of extrapulmonary tuberculosis

Youness Mechal, Elmostafa Benaissa, Nadia El mrimar, Yassine Benlahlou, Fatna Bssaibis, Adil Zegmout, Mariama Chadli, Yashpal S. Malik, Nadia Touil, Ahmed Abid, Adil Maleb, Mostafa Elouennass

Open Access Research article

Elevation of C-reactive protein, P-selectin and Resistin as potential inflammatory biomarkers of urogenital Schistosomiasis exposure in preschool children

Theresa N. Chimponda, Caroline Mushayi, Derick N. M. Osakunor, Arthur Vengesai, Eyoh Enwono, Seth Amanfo, Janice Murray, Cremance Tshuma, Francisca Mutapi, Takafira Mduluza

Open Access Research article

Prevalence and associated factors of active trachoma among children in Ethiopia: a systematic review and meta-analysis

Alemu Gebrie, Animut Alebel, Abriham Zegeye, Bekele Tesfaye, Fasil Wagnew

Open Access Research article

Epidemiological study of scarlet fever in Shenyang, China

Huijie Chen, Ye Chen, Baijun Sun, Lihai Wen, Xiangdong An

Open Access Research Article

Comparing alternative cholera vaccination strategies in Maela refugee camp: using a transmission model in public health practice

Joshua Havumaki, Rafael Meza, Christina R. Phares, Kashmira Date, Marisa C. Eisenberg

Open Access Research article

Factors affecting HIV counselling and testing among Ethiopian women aged 15–49

Asfaw Negero Erena, Guanxin Shen, Ping Lei

Open Access Correction

Correction to: Procalcitonin-guided antibiotic therapy in critically ill adults: a meta-analysis

Tao Zhang, Yan Wang, Qianting Yang, Yalin Dong

Open Access Technical advance

Validating a screening agar for linezolid-resistant enterococci

Guido Werner, Carola Fleige, Ingo Klare, Robert E. Weber, Jennifer K. Bender

Open Access Research article

1g versus 2 g daily intravenous ceftriaxone in the treatment of community onset pneumonia – a propensity score analysis of data from a Japanese multicenter registry

Shinya Hasegawa, Ryuichi Sada, Makito Yaegashi, Konosuke Morimoto, Takahiro Mori, Masahiko Abe, Takao Wakabayashi, Masahiro Aoshima, Naoto Hosokawa, Norihiro Kaneko, Naoko Katsurada, Kei Nakashima, Yoshihito Otsuka, Eiichiro Sando, Kaori Shibui, Daisuke Suzuki, Kenzo Tanaka, Kentaro Tochitani, Makito Yaegashi, Masayuki Chikamori, Naohisa Hamashige, Masayuki Ishida, Hiroshi Nakaoka, Norichika Aso, Hiroyuki Ito, Kei Matsuki, Yoshiko Tsuchihashi, Koya Ariyoshi, Bhim G. Dhoubhadel, Akitsugu Furumoto, Sugihiro Hamaguchi, Tomoko Ishifuji, Shungo Katoh, Satoshi Kakiuchi, Emi Kitashoji, Takaharu Shimazaki, Motoi Suzuki, Masahiro Takaki, Konosuke Morimoto, Kiwao Watanabe, Lay-Myint Yoshida

Open Access Research article

Severe acute respiratory infection risk following glucocorticosteroid treatment in uncomplicated influenza-like illness resulting from pH1N1 influenza infection: a case control study

Xuesen Xing, Shixiong Hu, Meihua Chen, Faxian Zhan, Huihui Liu, Zhang Chen, Hengjiao Zhang, Ge Zeng, Qiaohua Xu, Hong Zhang, Man Liu, Honghui Liu, Lidong Gao, Lijie Zhang

Open Access Study protocol

Study protocol for the multicentre cohorts of Zika virus infection in pregnant women, infants, and acute clinical cases in Latin America and the Caribbean: the ZIKAlliance consortium

Vivian I. Avelino-Silva, Philippe Mayaud, Adriana Tami, Maria C. Miranda, Kerstin D. Rosenberger, Neal Alexander, Luis Nacul, Aluisio Segurado, Moritz Pohl, Sarah Bethencourt, Luis A. Villar, Isabelle F. T. Viana, Renata Rabello, Carmen Soria, Silvia P. Salgado, Eduardo Gotuzzo, María G. Guzmán, Pedro A. Martínez, Hugo López-Gatell, Jennifer Hegewisch-Taylor, Victor H. Borja-Aburto, Cesar Gonzalez, Eduardo M. Netto, Paola M. Saba Villarroel, Bruno Hoen, Patrícia Brasil, Ernesto T. A. Marques, Barry Rockx, Marion Koopmans, Xavier de Lamballerie, Thomas Jaenisch, Thomas Jaenisch, Kerstin Daniela Rosenberger, Ivonne Morales, Frank Tobian, Lorenz Uhlmann, Moritz Pohl, Julius Schretzmann, Annika Leege, Ernesto T. A. Marques, Isabelle F. T. Viana, Roberto D. Lins, Patrícia Brasil, Ana Maria Bispo de Filippis, Ana Claudia Machado Duarte, Otavio de Melo Espíndola, Myrna Bonaldo, Renata Rabello, Luana Damasceno, Vivian Avelino-Silva, Aluisio Segurado, Ester Sabino, Maria Cassia Mendes-Correa, Luis Nacul, Neal Alexander, Eduardo Martins Netto, Adriana Tami, Sarah Bethencourt, Cristel Falcon, Egri Rodríguez, Victmar Matos, Maria José Tinedo, Yenifer La Rosa, Marianela Murillo, Luis Angel Villar, Maria Consuelo Miranda, Anyela Lozano, Victor Mauricio Herrera, Adriana Gomez, Rosa Margarita Gelvez, Ricardo Ortiz, Carmen Soria, Lady Dimitrakis, Silvia Paola Salgado, Mary Regato Arrata, Eduardo Gotuzzo, Humberto Guerra Allison, Michael Talledo, Paola Mariela Saba Villarroel, Eric Martínez Torres, María G. Guzmán, Pedro A. Martínez Rodríguez, Mayling Alvarez Vera, Belkis Galindo Santana, Alicia Reyes, Silvia Serrano Álvarez, Diana Ferriol Dorticós, Jennifer Hegewisch-Taylor, Celia Alpuche-Aranda, Hugo López-Gatell, Esteban González-Diaz, Norma Pavía-Ruz, Victor Hugo Borja-Aburto, Cesar Gonzalez, Concepción Grajales, Teresita Rojas, Lumumba Arriaga, Alfonso Vallejos, Bruno Hoen, Dominique Tynevez, Xavier de Lamballerie, Laurence Thirion, Jan Felix Drexler, Barry Rockx, Eric van Gorp, Marion Koopmans

Open Access Research article

Septic pulmonary embolism in China: clinical features and analysis of prognostic factors for mortality in 98 cases

Jing Jiang, Qiu-li Liang, Li-hua Liu, Shuang-qi Cai, Zhong-ye Du, Jin-liang Kong, Yi-qiang Chen

Open Access Research article

Enterococcal periprosthetic joint infection: clinical and microbiological findings from an 8-year retrospective cohort study

Nora Renz, Rihard Trebse, Doruk Akgün, Carsten Perka, Andrej Trampuz

Open Access Research article

Where have all the susceptible gonococci gone? A historical review of changes in MIC distribution over the past 75 years

Chris Kenyon, Jolein Laumen, Dorien Van Den Bossche, Christophe Van Dijck

Open Access Research article

Intestinal parasite infections and associated factors among inmates of Arba Minch prison, southern Ethiopia: cross sectional study

Gemechu Ameya, Zerihun Zerdo, Mihret Tesfaye, Chimdo Jabesa, Abayneh Awaje, Kaleb Dejene, Petros Shika, Mohammed Eshetu

Open Access Research article

Identification and characterization of microglia/macrophages in the granuloma microenvironment of encephalic schistosomiasis japonicum

Zhoubin Tan, Zhuowei Lei, Zhuo Zhang, Huaqiu Zhang, Kai Shu, Feng Hu, Ting Lei

Open Access Research article

Prevalence and predictors of Toxoplasma gondii infection in pregnant women from Dhamar, Yemen

Abdulelah H. Al-Adhroey, Amat Al-Khaleq O. Mehrass, Abdulqawi A. Al-Shammakh, Abdullatif D. Ali, Mohammed Y. M. Akabat, Hesham M. Al-Mekhlafi

Open Access Research article

Antimicrobial resistance of bacteraemia in the emergency department of a German university hospital (2013–2018): potential carbapenem-sparing empiric treatment options in light of the new EUCAST recommendations

Kathrin Rothe, Nina Wantia, Christoph D. Spinner, Jochen Schneider, Tobias Lahmer, Birgit Waschulzik, Roland M. Schmid, Dirk H. Busch, Juri Katchanov

Open Access Case report

A co-infection of varicella-zoster virus and Pneumocystis jirovecii in a non-HIV immunocompromised patient: a case report

Hirotada Muramatsu, Akira Kuriyama, Yoshiaki Anzai, Tetsunori Ikegami

Open Access Research article

Determinants of AIDS and non-AIDS related mortality among people living with HIV in Shiraz, southern Iran: a 20-year retrospective follow-up study

Zahra Gheibi, Zahra Shayan, Hassan Joulaei, Mohammad Fararouei, Shohreh Beheshti, Mostafa Shokoohi

Open Access Case report

Genital Kaposi sarcoma in a HIV and syphilis co-infected patient: case presentation

Helena Lucia Barroso dos Reis, Dennis de Carvalho Ferreira, Neide Aparecida Tosato Boldrini, Carolina Galvão, João Victor Jacomele Caldas, Marize Freitas Santos Neves, Philippe Godefroy

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