Detection of mismatch repair gene germline mutation carrier among Chinese population with colorectal cancer
- Open Access
- 01.12.2008
- Research article
Abstract
Background
Methods
Patients
Extraction of genomic DNA
Synthesis of fluorescent primer
Microsatellite instability analysis
Immunohistochemical staining for MSH2, MSH6 and MLH1 on TMAs
Detection of methylation of MLH1 promoter by quantitative MSP
Extraction of genomic DNA from blood
Mutation of MSH2, MLH1 and MSH6 genes
Statistical methods
Results
Cases
|
Amount
|
|---|---|
Age | 60.8 ± 10.5 yr |
Gender: | |
male | 84(57.5%) |
female | 62(42.5%) |
Location: | |
ascending colon | 24 (16.3%) |
transverse colon | 15 (10.3%) |
descending colon | 13 (8.9%) |
sigmoid colon | 16 (11.0%) |
rectum | 78 (53.4%) |
Multiple cancer: | |
synchronous tumours | 3(2%) |
metachronous tumour | 7 (4.5%) |
Pathology: | |
adenocarcinoma | 93 (63.7%) |
mucinous carcinoma | 23 (15.8%) |
mixed type | 30 (20.5%) |
Dukes stage*: | |
I | 17 (11.6%) |
II | 69 (47.2%) |
III | 48(32.9%) |
IV | 12 (8.2%) |
Family history | 7 |
Amsterdam criteria | 1 |
The results of the MSI analysis, hypermethylation of MLH1 and IHC staining of MSH2, MSH6 and MLH1
IHC(-) | MSH2 | MSH6 | MLH1 | None | Hypermethylation of MLH1 |
|---|---|---|---|---|---|
MSI-H | 8* | 4* | 7 | 1 | 14 |
MSI-L | 1 | 3 | 9 | 2 | 5 |
MSS | 0 | 0 | 1 | 111 | n.a.# |
Comparison of clinical features between MSI and MSS colorectal cancers
MSS (n = 112) | MSI (n = 34) | P-value | ||
|---|---|---|---|---|
MSI-L (n = 15) | MSI-H (n = 19) | |||
Mean age (range) | 60.0 (26–84) | 71.9 ± 17.8 | 60.4 ± 9.4 | 0.010 |
Gender | ||||
Male | 67 | 8 | 12 | 0.207 |
Female | 45 | 7 | 7 | |
Location of tumor | 0.658 | |||
Ascending colon | 19 | 1 | 4 | |
Transverse colon | 9 | 1 | 4 | |
Descending colon | 10 | 2 | 0 | |
Sigmoid flexure | 11 | 1 | 4 | |
Rectum | 61 | 10 | 7 | |
Pathological type | 0.545 | |||
Adenocarcinoma | 71 | 11 | 13 | |
Mucinous cancer | 39 | 4 | 6 | |
Mixture type | 2 | 0 | 0 | |
Dukes' Staging# | 0.008 | |||
Stage I | 15 | 2 | 0 | |
Stage II | 57 | 5 | 7 | |
Stage III | 34 | 6 | 8 | |
Stage IV | 6 | 2 | 4 | |
Degree of differentiation | 0.169 | |||
Well | 35 | 6 | 5 | |
Moderate | 58 | 3 | 6 | |
Poor | 11 | 6 | 8 | |
MSI state, germline mutations, and consequential changes in amino-acid sequence
Patient No. | MSI state | Mutant gene | Exon | Mutation site | Change in amino acid sequence |
|---|---|---|---|---|---|
2 | L | MSH2 | 12 | c.1886 A > G | p.629 Gln > Arg |
28 | H | MSH2 | 7 | c.1225 C > A | p.409 Gln > Lys |
93 | L | MSH6 | 5 | c.3200 C > A | p.1067 Pro > His |
98 | H | MSH2 | 12 | c.1886 A > G | p.629 Gln > Arg |
115 | H | MSH6 | 2 | c.440 T > A | p.149 Leu > His |
119 | H | MSH2 | 7 | c.1145 G > A | p.382 Arg > His |
132 | H | MSH6 | 5 | c.3185 C > T | p.1062 Pro > Leu |
151 | H | MSH2 | 7 | c.1168 C > T | p.390 Phe > Leu |
Patient No. | Age | Sex | Tumor position | Pathology | Dukes' stage | MSI state | Family history | Multiple primary |
|---|---|---|---|---|---|---|---|---|
2 | 49 | F | Sigmoid | Adenocarcinoma | C1 | H | No | No |
28 | 54 | F | Rectum | Adenocarcinoma | B1 | H | No | No |
93 | 68 | M | Rectum | Adenocarcinoma | B2 | L | No | No |
98 | 78 | F | Sigmoid | Mucinous carcinoma | B1 | H | No | No |
115 | 57 | F | Rectum | Adenocarcinoma | C2 | L | No | No |
119 | 61 | F | Rectum | Adenocarcinoma | B1 | H | No | No |
124 | 34 | F | Hepatic Flexure | Mucinous carcinoma | C2 | H | Yes* | No |
151 | 68 | F | Rectum | Adenocarcinoma | C1 | H | No | No |
N | Mutation | |||
|---|---|---|---|---|
total | MSH2 | MSH6 | ||
MSI-L | 17 | 2 | 1 | 1 |
MSL-H | 17 | 6 | 4 | 2 |
total | 34 | 8 | 5 | 3 |