Skip to main content
Erschienen in: Magnetic Resonance Materials in Physics, Biology and Medicine 3/2018

01.06.2018 | Research Article

Distortion correction of echo planar images applying the concept of finite rate of innovation to point spread function mapping (FRIP)

verfasst von: Rita G. Nunes, Joseph V. Hajnal

Erschienen in: Magnetic Resonance Materials in Physics, Biology and Medicine | Ausgabe 3/2018

Einloggen, um Zugang zu erhalten

Abstract

Objective

Point spread function (PSF) mapping enables estimating the displacement fields required for distortion correction of echo planar images. Recently, a highly accelerated approach was introduced for estimating displacements from the phase slope of under-sampled PSF mapping data. Sampling schemes with varying spacing were proposed requiring stepwise phase unwrapping. To avoid unwrapping errors, an alternative approach applying the concept of finite rate of innovation to PSF mapping (FRIP) is introduced, using a pattern search strategy to locate the PSF peak, and the two methods are compared.

Materials and methods

Fully sampled PSF data was acquired in six subjects at 3.0 T, and distortion maps were estimated after retrospective under-sampling. The two methods were compared for both previously published and newly optimized sampling patterns. Prospectively under-sampled data were also acquired. Shift maps were estimated and deviations relative to the fully sampled reference map were calculated.

Results

The best performance was achieved when using FRIP with a previously proposed sampling scheme. The two methods were comparable for the remaining schemes. The displacement field errors tended to be lower as the number of samples or their spacing increased.

Conclusion

A robust method for estimating the position of the PSF peak has been introduced.
Literatur
1.
Zurück zum Zitat Jezzard P, Balaban RS (1995) Correction for geometric distortion in echo planar images from B0 field variations. Magn Reson Med 34:65–73CrossRefPubMed Jezzard P, Balaban RS (1995) Correction for geometric distortion in echo planar images from B0 field variations. Magn Reson Med 34:65–73CrossRefPubMed
2.
Zurück zum Zitat Robson MD, Gore JC, Constable RT (1997) Measurement of the point spread function in MRI using constant time imaging. Magn Reson Med 38:733–740CrossRefPubMed Robson MD, Gore JC, Constable RT (1997) Measurement of the point spread function in MRI using constant time imaging. Magn Reson Med 38:733–740CrossRefPubMed
3.
Zurück zum Zitat Zaitsev M, Hennig J, Speck O (2004) Point spread function mapping with parallel imaging techniques and high acceleration factors: fast, robust, and flexible method for echo-planar imaging distortion correction. Magn Reson Med 52:1156–1166CrossRefPubMed Zaitsev M, Hennig J, Speck O (2004) Point spread function mapping with parallel imaging techniques and high acceleration factors: fast, robust, and flexible method for echo-planar imaging distortion correction. Magn Reson Med 52:1156–1166CrossRefPubMed
4.
Zurück zum Zitat Zeng H, Constable RT (2002) Image distortion correction in EPI: comparison of field mapping with point spread function mapping. Magn Reson Med 48:137–146CrossRefPubMed Zeng H, Constable RT (2002) Image distortion correction in EPI: comparison of field mapping with point spread function mapping. Magn Reson Med 48:137–146CrossRefPubMed
5.
Zurück zum Zitat In MH, Speck O (2012) Highly accelerated PSF-mapping for EPI distortion correction with improved fidelity. Magn Reson Mater Phy Biol Med 25:183–192CrossRef In MH, Speck O (2012) Highly accelerated PSF-mapping for EPI distortion correction with improved fidelity. Magn Reson Mater Phy Biol Med 25:183–192CrossRef
6.
Zurück zum Zitat Dragonu I, Lange T, Baxan N, Snyder J, Hennig J, Zaitsev M (2013) Accelerated point spread function mapping using signal modeling for accurate echo-planar imaging geometric distortion correction. Magn Reson Med 69:1650–1656CrossRefPubMed Dragonu I, Lange T, Baxan N, Snyder J, Hennig J, Zaitsev M (2013) Accelerated point spread function mapping using signal modeling for accurate echo-planar imaging geometric distortion correction. Magn Reson Med 69:1650–1656CrossRefPubMed
7.
Zurück zum Zitat Vetterli M, Marziliano P, Blu T (2002) Sampling signals with finite rate of innovation. IEEE Trans Signal Process 50:1417–1428CrossRef Vetterli M, Marziliano P, Blu T (2002) Sampling signals with finite rate of innovation. IEEE Trans Signal Process 50:1417–1428CrossRef
8.
Zurück zum Zitat Dragotti PL, Homann F (2009) Sampling signals with finite rate of innovation in the presence of noise. In: 2009 IEEE Int. Conf. Acoust. Speech Signal Process. IEEE, pp 2941–2944 Dragotti PL, Homann F (2009) Sampling signals with finite rate of innovation in the presence of noise. In: 2009 IEEE Int. Conf. Acoust. Speech Signal Process. IEEE, pp 2941–2944
9.
Zurück zum Zitat Blu T, Dragotti P-L (2008) Sparse sampling of signal innovations. Signal Process Mag IEEE 25:31–40CrossRef Blu T, Dragotti P-L (2008) Sparse sampling of signal innovations. Signal Process Mag IEEE 25:31–40CrossRef
10.
11.
Zurück zum Zitat Nunes RG, Hajnal JV (2014) Highly accelerated Point-Spread Function mapping based on Finite Rate of Innovation for EPI distortion correction. EJNMMI Phys 1:A45CrossRefPubMedPubMedCentral Nunes RG, Hajnal JV (2014) Highly accelerated Point-Spread Function mapping based on Finite Rate of Innovation for EPI distortion correction. EJNMMI Phys 1:A45CrossRefPubMedPubMedCentral
12.
Zurück zum Zitat Oh C, Hilal S, Cho Z, Oh C, Hilal S CZ (1988) Selective partial inversion recovery (SPIR) in steady state for selective saturation magnetic resonance imaging (MRI). In: Proceedings of the 7th Annual Meeting of ISMRM, San Francisco, USA, p 324 Oh C, Hilal S, Cho Z, Oh C, Hilal S CZ (1988) Selective partial inversion recovery (SPIR) in steady state for selective saturation magnetic resonance imaging (MRI). In: Proceedings of the 7th Annual Meeting of ISMRM, San Francisco, USA, p 324
13.
14.
Zurück zum Zitat Buonocore MH, Gao L (1997) Ghost artifact reduction for echo planar imaging using image phase correction. Magn Reson Med 38:89–100CrossRefPubMed Buonocore MH, Gao L (1997) Ghost artifact reduction for echo planar imaging using image phase correction. Magn Reson Med 38:89–100CrossRefPubMed
15.
Zurück zum Zitat Jenkinson M, Beckmann CF, Behrens TEJ, Woolrich MW, Smith SM (2012) FSL. Neuroimage 62:782–790CrossRefPubMed Jenkinson M, Beckmann CF, Behrens TEJ, Woolrich MW, Smith SM (2012) FSL. Neuroimage 62:782–790CrossRefPubMed
16.
Zurück zum Zitat Xiang Q-S, Ye FQ (2007) Correction for geometric distortion and N/2 ghosting in EPI by phase labeling for additional coordinate encoding (PLACE). Magn Reson Med 57:731–741CrossRefPubMed Xiang Q-S, Ye FQ (2007) Correction for geometric distortion and N/2 ghosting in EPI by phase labeling for additional coordinate encoding (PLACE). Magn Reson Med 57:731–741CrossRefPubMed
17.
Zurück zum Zitat Oh SH, Chung JY, In MH, Zaitsev M, Kim YB, Speck O, Cho ZH (2012) Distortion correction in EPI at ultra-high-field MRI using PSF mapping with optimal combination of shift detection dimension. Magn Reson Med 68:1239–1246CrossRefPubMed Oh SH, Chung JY, In MH, Zaitsev M, Kim YB, Speck O, Cho ZH (2012) Distortion correction in EPI at ultra-high-field MRI using PSF mapping with optimal combination of shift detection dimension. Magn Reson Med 68:1239–1246CrossRefPubMed
19.
Zurück zum Zitat Bowtell R, McIntyre DJO, Commandre M-J, Glover PM, Mansfield P (1994) Correction of geometric distortion in echo planar images. In: Proceedings of the 2nd Annual Meeting of ISMRM, San Francisco, USA, p 411 Bowtell R, McIntyre DJO, Commandre M-J, Glover PM, Mansfield P (1994) Correction of geometric distortion in echo planar images. In: Proceedings of the 2nd Annual Meeting of ISMRM, San Francisco, USA, p 411
20.
Zurück zum Zitat Andersson JLR, Skare S, Ashburner J (2003) How to correct susceptibility distortions in spin-echo echo-planar images: application to diffusion tensor imaging. Neuroimage 20:870–888CrossRefPubMed Andersson JLR, Skare S, Ashburner J (2003) How to correct susceptibility distortions in spin-echo echo-planar images: application to diffusion tensor imaging. Neuroimage 20:870–888CrossRefPubMed
21.
Zurück zum Zitat Holland D, Kuperman JM, Dale AM (2010) Efficient correction of inhomogeneous static magnetic field-induced distortion in Echo Planar Imaging. Neuroimage 50:175–183CrossRefPubMed Holland D, Kuperman JM, Dale AM (2010) Efficient correction of inhomogeneous static magnetic field-induced distortion in Echo Planar Imaging. Neuroimage 50:175–183CrossRefPubMed
22.
Zurück zum Zitat Chung JY, In MH, Oh SH, Zaitsev M, Speck O, Cho ZH (2011) An improved PSF mapping method for EPI distortion correction in human brain at ultra high field (7T). Magn Reson Mater Phy Biol Med 24:179–190CrossRef Chung JY, In MH, Oh SH, Zaitsev M, Speck O, Cho ZH (2011) An improved PSF mapping method for EPI distortion correction in human brain at ultra high field (7T). Magn Reson Mater Phy Biol Med 24:179–190CrossRef
23.
Zurück zum Zitat Pruessmann KP, Weiger M, Scheidegger MB, Boesiger P (1999) SENSE: sensitivity encoding for fast MRI. Magn Reson Med 42:952–962CrossRefPubMed Pruessmann KP, Weiger M, Scheidegger MB, Boesiger P (1999) SENSE: sensitivity encoding for fast MRI. Magn Reson Med 42:952–962CrossRefPubMed
Metadaten
Titel
Distortion correction of echo planar images applying the concept of finite rate of innovation to point spread function mapping (FRIP)
verfasst von
Rita G. Nunes
Joseph V. Hajnal
Publikationsdatum
01.06.2018
Verlag
Springer International Publishing
Erschienen in
Magnetic Resonance Materials in Physics, Biology and Medicine / Ausgabe 3/2018
Print ISSN: 0968-5243
Elektronische ISSN: 1352-8661
DOI
https://doi.org/10.1007/s10334-017-0669-1

Weitere Artikel der Ausgabe 3/2018

Magnetic Resonance Materials in Physics, Biology and Medicine 3/2018 Zur Ausgabe

Update Radiologie

Bestellen Sie unseren Fach-Newsletter und bleiben Sie gut informiert.