nach oben

Archives of Virology

Erschienen in:

18.09.2018 | Annotated Sequence Record

Full genome sequence of a novel iflavirus from the leafhopper Psammotettix alienus

verfasst von: Hui Wang, Yan Liu, Wenwen Liu, Mengji Cao, Xifeng Wang

Erschienen in: Archives of Virology | Ausgabe 1/2019

Einloggen, um Zugang zu erhalten

Abstract

A novel iflavirus was discovered in Psammotettix alienus by RNA sequencing. The virus genome has 10,826 nucleotides (nt) excluding the poly A tail, encodes a 3187-amino-acid polyprotein, and is tentatively named “Psammotettix alienus iflavirus 1” (PaIV1). PaIV1 has a similar genomic structure, conserved motifs, and a close phylogenetic relationship to members of the genus Iflavirus, but it shows only 41.9-55.2% sequence identity in the full genome and 16.2-49% in the deduced polyprotein. Thus, we suggest that it is a new member of the genus Iflavirus, family Iflaviridae.

Nur mit Berechtigung zugänglich

Valles SM, Chen Y, Firth AE, Dma G, Hashimoto Y, Herrero S, de Miranda JR, Ryabov E, Consortium IR (2017) ICTV Virus Taxonomy Profle: Ifaviridae. J Gen Virol 98:527–528CrossRefPubMedPubMedCentral

Lee YF, Nomoto A, Detjen BM, Wimmer E (1977) The genome linked protein of picornaviruses: I. A protein covalently linked to poliovirus genome RNA. Proc Natl Acad Sci USA 74:59–63CrossRefPubMed

Ongus JR, Roode EC, Pleij CW, Vlak JM, van Oers MM (2006) The 5’ non-translated region of varroa destructor virus 1 (genus Ifavirus): structure prediction and IRES activity in Lymantria dispar cells. J Gen Virol 87:3397–3407CrossRefPubMed

Wu TY, Wu CY, Chen YJ, Chen CY, Wang CH (2007) The 5’ untranslated region of Perina nuda virus (PnV) possesses a strong internal translation activity in baculovirus-infected insect cells. FEBS Lett 581(16):3120–3126CrossRefPubMed

Nikolaj B, Jan H, Søren B, Dieter B (1996) Cleavage site analysis in picornaviral polyproteins: discovering cellular targets by neural networks. Protein Sci 5:2203–2216CrossRef

Chen Y, Liu S, Bonning BC (2015) Genome sequence of a novel iflavirus from the leafhopper, Graminella nigrifrons. Genome Announc 3(2):e00323-15CrossRefPubMedPubMedCentral

Wu N, Zhang P, Liu W, Cao M, Wang X (2018) Sequence analysis and genomic organization of a new insect iflavirus, Sogatella furcifera honeydew virus 1. Arch Virol 163:2001–2003CrossRefPubMed

Hashimoto Y, Kawase S (1983) Characteristics of structural proteins of infectious facherie virus from the silkworm, Bombyx mori. J Invertebr Pathol 41:68–76CrossRef

Oers MMV (2010) Genomics and Biology of Ifaviruses. Insect Virology. Caister Academic Press, Norfolk, pp 231–250

10.

Abt I, Derlink M, Mabon R, Virant-Doberlet M, Jacquot E (2018) Integrating multiple criteria for the characterization of Psammotettix populations in European cereal fields. Bull Entomol Res 108:185–202CrossRefPubMed

11.

Vacke J (1961) Wheat dwarf virus disease. Biol Plant 3:228–233CrossRef

12.

Liu Y, Du Z, Wang H, Zhang S, Cao M, Wang X (2018) Identification and characterization of wheat yellow striate virus, a novel leafhopper-transmitted nucleorhabdovirus infecting wheat. Front Microbiol 9:468CrossRefPubMedPubMedCentral

13.

Koonin EV, Dolja VV (1993) Evolution and taxonomy of positive-strand RNA viruses: implications of comparative analysis of amino acid sequences. Crit Rev Biochem Mol 28:375–430CrossRef

14.

Koonin EV, Dolja VV (1993) Evolution and taxonomy of positive-strand RNA viruses: implications of comparative analysis of amino acid sequences. Crit Rev Biochem Mol 28:375–430CrossRef

15.

Gorbalenya AE, Donchenko AP, Blinov VM, Koonin EV (1989) Cysteine proteases of positive strand RNA viruses and chymot-rypsin-like serine proteases. A distinct protein superfamily with a common structural fold. FEBS Lett 243:103–114CrossRefPubMed

Titel: Full genome sequence of a novel iflavirus from the leafhopper Psammotettix alienus
verfasst von: Hui Wang
Yan Liu
Wenwen Liu
Mengji Cao
Xifeng Wang
Publikationsdatum: 18.09.2018
Verlag: Springer Vienna
Erschienen in: Archives of Virology / Ausgabe 1/2019
Print ISSN: 0304-8608
Elektronische ISSN: 1432-8798
DOI: https://doi.org/10.1007/s00705-018-4041-1

Leitlinien kompakt für die Innere Medizin

Mit medbee Pocketcards sicher entscheiden.

^{Seit 2022 gehört die medbee GmbH zum Springer Medizin Verlag}

Kostenlos registrieren

Neu im Fachgebiet Innere Medizin

19.04.2024 | Vorhofflimmern | Nachrichten

Update Innere Medizin

Bestellen Sie unseren Fach-Newsletter und bleiben Sie gut informiert.

Newsletter bestellen

Live-Webinar: Aktuelle Leitlinien bei Herz-Kreislauf-Erkrankungen

Springer Medizin

Full genome sequence of a novel iflavirus from the leafhopper Psammotettix alienus

Abstract

Leitlinien kompakt für die Innere Medizin

Neu im Fachgebiet Innere Medizin

Parodontalbehandlung verbessert Prognose bei Katheterablation

Antihypertensiva schützen auch alte Menschen noch vor Demenz

Stereotaktische Radiatio schlägt konventionelle Bestrahlung

Denken Sie bei starker Blutung auch an die Hemmkörper-Hämophilie

Update Innere Medizin

Live-Webinar: Aktuelle Leitlinien bei Herz-Kreislauf-Erkrankungen

Springer Medizin

Abstract

Bitte loggen Sie sich ein, um Zugang zu diesem Inhalt zu erhalten

Weitere Artikel der Ausgabe 1/2019

A Victorivirus from Fusarium asiaticum, the pathogen of Fusarium head blight in China

The complete genome sequence analysis of West Nile virus strains isolated in Slovakia (central Europe)

Thailand orthohantavirus infection in patients with chronic kidney disease of unknown aetiology in Sri Lanka

Development and comparison of two H5N8 influenza A vaccine candidate strains

Spatial distribution of orally administered viral fusolin protein in the insect midgut and possible synergism between fusolin and digestive proteases to disrupt the midgut peritrophic matrix

Isolation, identification, and classification of a novel rhabdovirus from diseased Chinese rice-field eels (Monopterus albus)

Leitlinien kompakt für die Innere Medizin

Neu im Fachgebiet Innere Medizin

Parodontalbehandlung verbessert Prognose bei Katheterablation

Antihypertensiva schützen auch alte Menschen noch vor Demenz

Stereotaktische Radiatio schlägt konventionelle Bestrahlung

Denken Sie bei starker Blutung auch an die Hemmkörper-Hämophilie

Update Innere Medizin