Ausgabe 1/2018
Inhalt (53 Artikel)
Complete genome sequence of Lactobacillus pentosus SLC13, isolated from mustard pickles, a potential probiotic strain with antimicrobial activity against foodborne pathogenic microorganisms
- Open Access
- Genome Report
Min-Lang Huang, Jing-Yao Huang, Cheng-Yen Kao, Tony J. Fang
Genome sequence and comparative genomic analysis of a clinically important strain CD11-4 of Janibacter melonis isolated from celiac disease patient
- Open Access
- Genome Report
Atul Munish Chander, Rakesh Kochhar, Devinder Kumar Dhawan, Sanjay Kumar Bhadada, Shanmugam Mayilraj
Involvement of gut microbiome in human health and disease: brief overview, knowledge gaps and research opportunities
- Open Access
- Review
Dachao Liang, Ross Ka-Kit Leung, Wenda Guan, William W. Au
Possible correlation between gut microbiota and immunity among healthy middle-aged and elderly people in southwest China
- Open Access
- Research
Xi Shen, Junjie Miao, Qun Wan, Shuyue Wang, Ming Li, Fangfang Pu, Guoqing Wang, Wei Qian, Qian Yu, Francesco Marotta, Fang He
Complete genome sequence of Lactobacillus rhamnosus Pen, a probiotic component of a medicine used in prevention of antibiotic-associated diarrhoea in children
- Open Access
- Genome Report
Piotr Jarocki, Marcin Podleśny, Mariusz Krawczyk, Agnieszka Glibowska, Jarosław Pawelec, Elwira Komoń-Janczara, Oleksandr Kholiavskyi, Michał Dworniczak, Zdzisław Targoński
Molecular detection of human enteric viruses circulating among children with acute gastroenteritis in Valencia, Venezuela, before rotavirus vaccine implementation
- Open Access
- Research
Ana C. Alcalá, Kriss Pérez, Ruth Blanco, Rosabel González, Juan E. Ludert, Ferdinando Liprandi, Esmeralda Vizzi
Molecular epidemiology of genogroup II norovirus infections in acute gastroenteritis patients during 2014–2016 in Pudong New Area, Shanghai, China
- Open Access
- Research
Caoyi Xue, Lifeng Pan, Weiping Zhu, Yuanping Wang, Huiqin Fu, Chang Cui, Lan Lu, Sun Qiao, Biao Xu
Occurrence of multidrug-resistant and ESBL-producing atypical enteropathogenic Escherichia coli in China
- Open Access
- Research
Yanmei Xu, Hui Sun, Xiangning Bai, Shanshan Fu, Ruyue Fan, Yanwen Xiong
Towards ending viral hepatitis as a public health threat: translating new momentum into concrete results in South-East Asia
- Open Access
- Letter to the Editor
Poonam Khetrapal Singh
Chlortetracycline and florfenicol induce expression of genes associated with pathogenicity in multidrug-resistant Salmonella enterica serovar Typhimurium
- Open Access
- Research
Devin B. Holman, Shawn M. D. Bearson, Bradley L. Bearson, Brian W. Brunelle
Genomic characterization of malonate positive Cronobacter sakazakii serotype O:2, sequence type 64 strains, isolated from clinical, food, and environment samples
- Open Access
- Research
Gopal R. Gopinath, Hannah R. Chase, Jayanthi Gangiredla, Athmanya Eshwar, Hyein Jang, Isha Patel, Flavia Negrete, Samantha Finkelstein, Eunbi Park, TaeJung Chung, YeonJoo Yoo, JungHa Woo, YouYoung Lee, Jihyeon Park, Hyerim Choi, Seungeun Jeong, Soyoung Jun, Mijeong Kim, Chaeyoon Lee, HyeJin Jeong, Séamus Fanning, Roger Stephan, Carol Iversen, Felix Reich, Günter Klein, Angelika Lehner, Ben D. Tall
The impact of Rhodiola rosea on the gut microbial community of Drosophila melanogaster
- Open Access
- Research
Khachik E. Labachyan, Dara Kiani, Evgueni A. Sevrioukov, Samuel E. Schriner, Mahtab Jafari
Infectious bursal disease virus inoculation infection modifies Campylobacter jejuni–host interaction in broilers
- Open Access
- Research
Li Li, Colin Pielsticker, Zifeng Han, Tereza Kubasová, Ivan Rychlik, Bernd Kaspers, Silke Rautenschlein
The prevalence of Helicobacter pylori infection and other risk factors among Mongolian dyspeptic patients who have a high incidence and mortality rate of gastric cancer
- Open Access
- Research
Oyuntsetseg Khasag, Gantuya Boldbaatar, Tserentogtoh Tegshee, Davaadorj Duger, Azzaya Dashdorj, Tomohisa Uchida, Takeshi Matsuhisa, Yoshio Yamaoka
A hybrid reference-guided de novo assembly approach for generating Cyclospora mitochondrion genomes
- Open Access
- Short Report
G. R. Gopinath, H. N. Cinar, H. R. Murphy, M. Durigan, M. Almeria, B. D. Tall, A. J. DaSilva
Key lime (Citrus aurantifolia) inhibits the growth of triple drug resistant Helicobacter pylori
- Open Access
- Research
Su-Mi Lee, Seon-Young Park, Moon-Ju Kim, Eun-Ae Cho, Chung-Hwan Jun, Chang-Hwan Park, Hyun-Soo Kim, Sung-Kyu Choi, Jong-Sun Rew
Genome analyses of blaNDM-4 carrying ST 315 Escherichia coli isolate from sewage water of one of the Indian hospitals
- Open Access
- Genome Report
Ayesha Z. Beg, Asad U. Khan
Antimicrobial resistant Helicobacter fennelliae isolated from non-diarrheal child stool sample in Battambang, Cambodia
- Open Access
- Letter to the Editor
Supaporn Ruksasiri, Woradee Lurchachaiwong, Patcharawalai Wassanarungroj, Oralak Serichantalergs, Chiek Sivhour, Nou Samon, Sovann Ly, Lon Chanthap, Ladaporn Bodhidatta, John Crawford
Impact of the introduction of a nucleic acid amplification test for Clostridium difficile diagnosis on stool rejection policies
- Open Access
- Research
J. Goret, J. Blanchi, P. Floch, O. Peuchant, D. Chrisment, R. Sanchez, H. Biessy, R. Lemarié, D. Leyssene, B. Loutfi, S. Mimouni, T. Flao, C. Bébéar, F. Mégraud
Characterization of a novel multidrug resistance plasmid pSGB23 isolated from Salmonella enterica subspecies enterica serovar Saintpaul
- Open Access
- Genome Report
Yichen Ding, Ye Htut Zwe, Seow Fong Chin, Gurjeet S. Kohli, Daniela I. Drautz-Moses, Michael Givskov, Jorgen Schlundt, Stephan C. Schuster, Hyun-Gyun Yuk, Liang Yang
The role of probiotics, prebiotics and synbiotics in animal nutrition
- Open Access
- Review
Paulina Markowiak, Katarzyna Śliżewska
Takayasu’s arteritis associated with eosinophilic gastroenteritis, possibly via the overactivation of Th17
- Open Access
- Case Report
Mikihiro Fujiya, Shin Kashima, Yuya Sugiyama, Takuya Iwama, Masami Ijiri, Kazuyuki Tanaka, Keitaro Takahashi, Katuyoshi Ando, Yoshiki Nomura, Nobuhiro Ueno, Takuma Goto, Kentaro Moriichi, Yusuke Mizukami, Toshikatsu Okumura, Junpei Sasajima, Daisuke Fujishiro, Kensaku Okamoto, Yuichi Makino
High carriage of adherent invasive E. coli in wildlife and healthy individuals
- Open Access
- Short report
Oumaïra Rahmouni, Cécile Vignal, Marie Titécat, Benoît Foligné, Benjamin Pariente, Laurent Dubuquoy, Pierre Desreumaux, Christel Neut
ESBL-plasmid carriage in E. coli enhances in vitro bacterial competition fitness and serum resistance in some strains of pandemic sequence types without overall fitness cost
- Open Access
- Research
Amit Ranjan, Julia Scholz, Torsten Semmler, Lothar H. Wieler, Christa Ewers, Stefanie Müller, Derek J. Pickard, Peter Schierack, Karsten Tedin, Niyaz Ahmed, Katharina Schaufler, Sebastian Guenther
Tigecycline application in a 3-month-old infant with multiple drug resistant Klebsiella pneumonia: a case report
- Open Access
- Case Report
Cheng Peng, Xiaofeng Wang, Jiangwei Zhang, Yi Jiang, Xinlin Hou
N-Acetyl-glucosamine influences the biofilm formation of Escherichia coli
- Open Access
- Research
Jean-Félix Sicard, Philippe Vogeleer, Guillaume Le Bihan, Yaindrys Rodriguez Olivera, Francis Beaudry, Mario Jacques, Josée Harel
Emergence of G8P[6] rotavirus strains in Korean neonates
- Open Access
- Research
Su-Kyung Lee, Seoheui Choi, Seon-Hee Shin, Eun Jin Lee, Jungwon Hyun, Jae-Seok Kim, Hyun Soo Kim
Gut colonization with vancomycin-resistant Enterococcus and risk for subsequent enteric infection
- Open Access
- Research
Jordan E. Axelrad, Benjamin Lebwohl, Edward Cuaresma, Ken Cadwell, Peter H. R. Green, Daniel E. Freedberg
Identification of Schizosaccharomyces pombe in the guts of healthy individuals and patients with colorectal cancer: preliminary evidence from a gut microbiome secretome study
- Open Access
- Letter to the Editor
Siok-Fong Chin, Putri Intan Hafizah Megat Mohd Azlan, Luqman Mazlan, Hui-min Neoh
Identification of a new alanine racemase in Salmonella Enteritidis and its contribution to pathogenesis
- Open Access
- Research
Shilpa Ray, Susmita Das, Pritam Kumar Panda, Mrutyunjay Suar
Prevalence, resistance pattern, and molecular characterization of Staphylococcus aureus isolates from healthy animals and sick populations in Henan Province, China
- Open Access
- Research
Baoguang Liu, Huarun Sun, Yushan Pan, Yajun Zhai, Tian Cai, Xiaoling Yuan, Yanling Gao, Dandan He, Jianhua Liu, Li Yuan, Gongzheng Hu
Complete genome sequence of Enterococcus durans KLDS6.0933, a potential probiotic strain with high cholesterol removal ability
- Open Access
- Genome Report
Bailiang Li, Smith Etareri Evivie, Da Jin, Yueyue Meng, Na Li, Fenfen Yan, Guicheng Huo, Fei Liu
Rapid Isolation of intact Salmonella-containing vacuoles using paramagnetic nanoparticles
- Open Access
- Research
Vikash Singh, Peter Schwerk, Karsten Tedin
Cecal microbiome profile altered by Salmonella enterica, serovar Enteritidis inoculation in chicken
- Open Access
- Research
Liying Liu, Lili Lin, Linna Zheng, Hui Tang, Xinzhong Fan, Nianguo Xue, Min Li, Min Liu, Xianyao Li
Virulence gene profiles and molecular genetic characteristics of diarrheagenic Escherichia coli from a hospital in western China
- Open Access
- Research
Dan Li, Min Shen, Ying Xu, Chao Liu, Wen Wang, Jinyan Wu, Xianmei Luo, Xu Jia, Yongxin Ma
Phylogenetic characterization of norovirus strains detected from sporadic gastroenteritis in Seoul during 2014–2016
- Open Access
- Research
Young Eun Kim, Miok Song, Jaein Lee, Hyun Jung Seung, Eun-Young Kwon, Jinkyung Yu, Youngok Hwang, Taeho Yoon, Tae Jun Park, In Kyoung Lim
Clinical application of a multiplex genetic pathogen detection system remaps the aetiology of diarrhoeal infections in Shanghai
- Open Access
- Research
Shiwen Wang, Feng Yang, Dong Li, Juanxiu Qin, Weiwei Hou, Lian Jiang, Mimi Kong, Yong Wu, Yuchen Zhang, Fuju Zhao, Yi Fang, Yingxin Miao, Lingli Xu, Jie Chen, Zhijun Bao, Michal A. Olszewski, Hu Zhao, Yanmei Zhang
Genome characterization of bile-isolated Shewanella algae ACCC
- Open Access
- Genome Report
Shu-Ying Tseng, Kwong-Chung Tung, Jan-Fang Cheng, Yi-Hsuan Lee, Zong-Yen Wu, Yu-Kai Hong, Shi-Yu Chen, Yao-Ting Huang, Po-Yu Liu
Antimicrobial resistance in Enterobacteriaceae from healthy broilers in Egypt: emergence of colistin-resistant and extended-spectrum β-lactamase-producing Escherichia coli
- Open Access
- Research
Amira A. Moawad, Helmut Hotzel, Heinrich Neubauer, Ralf Ehricht, Stefan Monecke, Herbert Tomaso, Hafez M. Hafez, Uwe Roesler, Hosny El-Adawy
Characterization of Salmonella enterica serovars recovered from meat products legally and illegally imported into the EU reveals the presence of multiresistant and AmpC-producing isolates
- Open Access
- Research
Anja Müller, Wiebke Jansen, Nils Th. Grabowski, Corinna Kehrenberg
The prevalence of Campylobacter spp. in vegetables, fruits, and fresh produce: a systematic review and meta-analysis
- Open Access
- Review
Hooriyeh Mohammadpour, Enayat Berizi, Saeid Hosseinzadeh, Majid Majlesi, Morteza Zare
Complete genome sequence of Kocuria rhizophila BT304, isolated from the small intestine of castrated beef cattle
- Open Access
- Genome Report
Tae Woong Whon, Hyun Sik Kim, Jin-Woo Bae
Determination of virulence and fitness genes associated with the pheU, pheV and selC integration sites of LEE-negative food-borne Shiga toxin-producing Escherichia coli strains
- Open Access
- Research
Nadja Saile, Elisabeth Schuh, Torsten Semmler, Inga Eichhorn, Lothar H. Wieler, Andreas Bauwens, Herbert Schmidt
The microbiome of Crohn’s disease aphthous ulcers
- Open Access
- Research
Claire L. O’Brien, Christopher J. Kiely, Paul Pavli
Purification of Cyclospora cayetanensis oocysts obtained from human stool specimens for whole genome sequencing
- Open Access
- Research
Yvonne Qvarnstrom, Yuping Wei-Pridgeon, Erik Van Roey, Subin Park, Ganesh Srinivasamoorthy, Fernanda S. Nascimento, Delynn M. Moss, Eldin Talundzic, Michael J. Arrowood
Proliferation of enterotoxigenic Escherichia coli strain TW11681 in stools of experimentally infected human volunteers
- Open Access
- Research
Oda Barth Vedøy, Kurt Hanevik, Sunniva Todnem Sakkestad, Halvor Sommerfelt, Hans Steinsland
Genome sequence of Shigella sonnei 4303
- Open Access
- Genome Report
Laura Deutsch-Nagy, Péter Urbán, Zsuzsanna Tóth, Zoltán Bihari, Béla Kocsis, Csaba Fekete, Ferenc Kilár
Characterization and CRISPR-based genotyping of clinical trh-positive Vibrio parahaemolyticus
- Open Access
- Research
Jetnapang Kongrueng, Kanchana Srinitiwarawong, Mitsuaki Nishibuchi, Pimonsri Mittraparp-arthorn, Varaporn Vuddhakul
Microbiota profile in new-onset pediatric Crohn’s disease: data from a non-Western population
- Open Access
- Research
Mohammad I. El Mouzan, Harland S. Winter, Assad A. Assiri, Kirill S. Korolev, Ahmad A. Al Sarkhy, Scot E. Dowd, Mohammad A. Al Mofarreh, Rajita Menon
A decrease in anaerobic bacteria promotes Candida glabrata overgrowth while β-glucan treatment restores the gut microbiota and attenuates colitis
- Open Access
- Research
Rogatien Charlet, Clovis Bortolus, Melissandre Barbet, Boualem Sendid, Samir Jawhara
Development of multiplex PCR and multi-color fluorescent in situ hybridization (m-FISH) coupled protocol for detection and imaging of multi-pathogens involved in inflammatory bowel disease
- Open Access
- Research
Robert C. Sharp, Ebraheem S. Naser, Karel P. Alcedo, Ahmad Qasem, Latifa S. Abdelli, Saleh A. Naser
Antibiotic resistance, the 3As and the road ahead
- Open Access
- Review
Esther-Maria Antão, Szilvia Vincze, Regina Hanke, Lukas Klimmek, Katarzyna Suchecka, Antina Lübke-Becker, Lothar H. Wieler
Genome divergence and increased virulence of outbreak associated Salmonella enterica subspecies enterica serovar Heidelberg
- Open Access
- Research
Linto Antony, Melissa Behr, Donald Sockett, Dale Miskimins, Nicole Aulik, Jane Christopher-Hennings, Eric Nelson, Marc W. Allard, Joy Scaria
