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Zeitschrift

Gut Pathogens

Gut Pathogens 1/2019

Ausgabe 1/2019

Inhaltsverzeichnis ( 58 Artikel )

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Alteration in gut microbiota associated with hepatitis B and non-hepatitis virus related hepatocellular carcinoma

Qisha Liu, Fan Li, Yaoyao Zhuang, Jian Xu, Jianwei Wang, Xuhua Mao, Yewei Zhang, Xingyin Liu

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Prevalence and molecular determinants of colistin resistance among commensal Enterobacteriaceae isolated from poultry in northwest of Iran

Zeinab Pishnian, Mehri Haeili, Adel Feizi

01.12.2019 | Genome Report | Ausgabe 1/2019 Open Access

High contiguity genome sequence of a multidrug-resistant hospital isolate of Enterobacter hormaechei

Leigh G. Monahan, Matthew Z. DeMaere, Max L. Cummins, Steven P. Djordjevic, Piklu Roy Chowdhury, Aaron E. Darling

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Campylobacter jejuni enters gut epithelial cells and impairs intestinal barrier function through cleavage of occludin by serine protease HtrA

Aileen Harrer, Roland Bücker, Manja Boehm, Urszula Zarzecka, Nicole Tegtmeyer, Heinrich Sticht, Jörg D. Schulzke, Steffen Backert

01.12.2019 | Research | Ausgabe 1/2019 Open Access

CagL polymorphisms D58/K59 are predominant in Helicobacter pylori strains isolated from Mexican patients with chronic gastritis

Adolfo Román-Román, Verónica I. Martínez-Santos, Carlos A. Castañón-Sánchez, Alan J. Albañil-Muñoz, Paola González-Mendoza, Diana G. Soto-Flores, Dinorah N. Martínez-Carrillo, Gloria Fernández-Tilapa

01.12.2019 | Research | Ausgabe 1/2019 Open Access

The influence of probiotic bacteria and human gut microorganisms causing opportunistic infections on Blastocystis ST3

M. Lepczyńska, E. Dzika

01.12.2019 | Genome Report | Ausgabe 1/2019 Open Access

The complete genome and methylome of Helicobacter pylori hpNEAfrica strain HP14039

Binit Lamichhane, Eng-Guan Chua, Michael J. Wise, Connor Laming, Barry J. Marshall, Chin-Yen Tay

01.12.2019 | Research | Ausgabe 1/2019 Open Access

1,25(OH)2D3 deficiency-induced gut microbial dysbiosis degrades the colonic mucus barrier in Cyp27b1 knockout mouse model

Wenjing Zhu, Jiayao Yan, Chunchun Zhi, Qianwen Zhou, Xiaoqin Yuan

01.12.2019 | Genome Report | Ausgabe 1/2019 Open Access

Comparative genomic analysis of enterotoxigenic Escherichia coli O159 strains isolated from diarrheal patients in Korea

Si-yun Chung, Taesoo Kwon, Young-Seok Bak, Joung Je Park, Cheorl-Ho Kim, Seung-Hak Cho, Won Kim

01.12.2019 | Review | Ausgabe 1/2019 Open Access

Virulence factors, prevalence and potential transmission of extraintestinal pathogenic Escherichia coli isolated from different sources: recent reports

Jolanta Sarowska, Bozena Futoma-Koloch, Agnieszka Jama-Kmiecik, Magdalena Frej-Madrzak, Marta Ksiazczyk, Gabriela Bugla-Ploskonska, Irena Choroszy-Krol

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Rapid identification of capsular serotype K1/K2 Klebsiella pneumoniae in pus samples from liver abscess patients and positive blood culture samples from bacteremia cases via an immunochromatographic strip assay

Ching-Hsun Wang, Po-Liang Lu, Esther Yip-Mei Liu, Yih-Yuan Chen, Fu-Mei Lin, Yi-Tsung Lin, Feng-Yee Chang, Jung-Chung Lin

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Diagnosing and tracing the pathogens of infantile infectious diarrhea by amplicon sequencing

Haiyan Liu, Mingzhang Guo, Yuanchunzi Jiang, Yanhua Cao, Qingzeng Qian, Xiaoyun He, Kunlun Huang, Jianwei Zhang, Wentao Xu

01.12.2019 | Research | Ausgabe 1/2019 Open Access

NMR metabolomics reveals effects of Cryptosporidium infections on host cell metabolome

Christopher N. Miller, Charalampos G. Panagos, William R. T. Mosedale, Martin Kváč, Mark J. Howard, Anastasios D. Tsaousis

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Quantification of serine protease HtrA molecules secreted by the foodborne pathogen Campylobacter jejuni

Matthias Neddermann, Steffen Backert

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Two putative MmpL homologs contribute to antimicrobial resistance and nephropathy of enterohemorrhagic E. coli O157:H7

Salma H. Hussein, Reham Samir, Ramy K. Aziz, Mohamed A. Toama

01.12.2019 | Genome Report | Ausgabe 1/2019 Open Access

Complete genome sequence of bile-isolated Enterococcus avium strain 352

Tao Yu, Lixiang Li, Qilin Zhao, Peng Wang, Xiuli Zuo

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Pancreatic disease patients are at higher risk for Clostridium difficile infection compared to those with other co-morbidities

Chetana Vaishnavi, Pramod K. Gupta, Megha Sharma, Rakesh Kochhar

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Gut microbiome associated with chemotherapy-induced diarrhea from the CapeOX regimen as adjuvant chemotherapy in resected stage III colorectal cancer

Zuo Fei, Yin Lijuan, Yang Xi, Wu Wei, Zhong Jing, Da Miao, Han Shuwen

01.12.2019 | Letter to the Editor | Ausgabe 1/2019 Open Access

Determination of azithromycin heteroresistant Campylobacter jejuni in traveler’s diarrhea

Woradee Lurchachaiwong, Supaporn Ruksasiri, Patcharawalai Wassanarungroj, Oralak Serichantalergs, Ladaporn Bodhidatta, John Crawford, Sanjaya Kumar Shrestha, Prativa Pandey

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Compositional and functional differences in human gut microbiome with respect to equol production and its association with blood lipid level: a cross-sectional study

Wei Zheng, Yue Ma, Ai Zhao, Tingchao He, Na Lyu, Ziqi Pan, Geqi Mao, Yan Liu, Jing Li, Peiyu Wang, Jun Wang, Baoli Zhu, Yumei Zhang

01.12.2019 | Research | Ausgabe 1/2019 Open Access

High primary resistance to metronidazole and levofloxacin, and a moderate resistance to clarithromycin in Helicobacter pylori isolated from Karnataka patients

Vignesh Shetty, Binit Lamichhane, Chin Yen Tay, Ganesh C. Pai, Ramachandra Lingadakai, Girisha Balaraju, Shiran Shetty, Mamatha Ballal, Eng Guan Chua

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Prevalence and pathologic effects of colibactin and cytotoxic necrotizing factor-1 (Cnf 1) in Escherichia coli: experimental and bioinformatics analyses

Radwa N. Morgan, Sarra E. Saleh, Hala A. Farrag, Mohammad M. Aboulwafa

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Cytokines derived from innate lymphoid cells assist Helicobacter hepaticus to aggravate hepatocellular tumorigenesis in viral transgenic mice

Xiao Han, Tianren Huang, Junqing Han

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Immunopathological properties of the Campylobacter jejuni flagellins and the adhesin CadF as assessed in a clinical murine infection model

Anna-Maria Schmidt, Ulrike Escher, Soraya Mousavi, Nicole Tegtmeyer, Manja Boehm, Steffen Backert, Stefan Bereswill, Markus M. Heimesaat

01.12.2019 | Genome Report | Ausgabe 1/2019 Open Access

Genomic characterization of Escherichia coli LCT-EC001, an extremely multidrug-resistant strain with an amazing number of resistance genes

Xuelin Zhang, Saisong Xiao, Xuege Jiang, Yun Li, Zhongyi Fan, Yi Yu, Peng Wang, Diangeng Li, Xian Zhao, Changting Liu

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Variation of human norovirus GII genotypes detected in Ibaraki, Japan, during 2012–2018

Takumi Motoya, Masahiro Umezawa, Aoi Saito, Keiko Goto, Ikuko Doi, Setsuko Fukaya, Noriko Nagata, Yoshiaki Ikeda, Kaori Okayama, Jumpei Aso, Yuki Matsushima, Taisei Ishioka, Akihide Ryo, Nobuya Sasaki, Kazuhiko Katayama, Hirokazu Kimura

01.12.2019 | Short report | Ausgabe 1/2019 Open Access

High frequency of toxigenic Clostridium difficile and Clostridium perfringens coinfection among diarrheic patients at health care facility-onset (HCFO) and community-onset (CO) centers in Bogotá, Colombia

Alex J. Forero, Marina Muñoz, Milena Camargo, Sara C. Soto-De León, Dora I. Ríos-Chaparro, Claudia Birchenall, Darío Pinilla, Juan M. Pardo, Diego F. Josa, Manuel A. Patarroyo, Juan D. Ramírez

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Prevalence of Helicobacter pylori infection and antibiotic resistance profile in Armenia

Manik Gemilyan, Gagik Hakobyan, Lucie Benejat, Bujana Allushi, Davit Melik-Nubaryan, Harutyun Mangoyan, Amandine Laur, Emilie Daguerre, Eduard Grigoryan, Francis Megraud

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Proton pump inhibitors and 180-day mortality in the elderly after Clostridium difficile treatment

Evan Stuart Bradley, Emily Howe, Xun Wu, John P. Haran

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Characterization of internalin genes in Listeria monocytogenes from food and humans, and their association with the invasion of Caco-2 cells

Xudong Su, Guojie Cao, Jianmin Zhang, Haijian Pan, Daofeng Zhang, Dai Kuang, Xiaowei Yang, Xuebin Xu, Xianming Shi, Jianghong Meng

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Differential genetic and functional background in inflammatory bowel disease phenotypes of a Greek population: a systems bioinformatics approach

Maria Gazouli, Nikolas Dovrolis, Andre Franke, George M. Spyrou, Leonardo A. Sechi, George Kolios

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Whole-genome comparative analysis of Campylobacter jejuni strains isolated from patients with diarrhea in northeastern Poland

Krzysztof Fiedoruk, Tamara Daniluk, Dorota Rozkiewicz, Elzbieta Oldak, Suhanya Prasad, Izabela Swiecicka

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Extensive inter-strain diversity among clinical isolates of Shigella flexneri with reference to its serotype, virulence traits and plasmid incompatibility types, a study from south India over a 6-year period

Ankita Das, Jharna Mandal

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Whole exome sequencing of patients who resolved Crohn’s disease and complex regional pain syndrome following treatment for paratuberculosis

J. Todd Kuenstner, Maher Kali, Christine Welch

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Validating the inhibitory effects of d- and l-serine on the enzyme activity of d-3-phosphoglycerate dehydrogenases that are purified from Pseudomonas aeruginosa, Escherichia coli and human colon

Jun Okuda, Syouya Nagata, Masashi Yasuda, Chigusa Suezawa

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Recombinant fusion protein of Heparin-Binding Hemagglutinin Adhesin and Fibronectin Attachment Protein (rHBHA-FAP) of Mycobacterium avium subsp. paratuberculosis elicits a strong gamma interferon response in peripheral blood mononuclear cell culture

Vida Eraghi, Abdollah Derakhshandeh, Arsalan Hosseini, Masoud Haghkhah, Leonardo A. Sechi, Azar Motamedi Boroojeni

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Whole-genome analysis of rotavirus G4P[6] strains isolated from Korean neonates: association of Korean neonates and rotavirus P[6] genotypes

Su-Kyung Lee, Seoheui Choi, Jae-Seok Kim, Eun Jin Lee, Jungwon Hyun, Hyun Soo Kim

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Nonhemolysis of epidemic El Tor biotype strains of Vibrio cholerae is related to multiple functional deficiencies of hemolysin A

Yufeng Fan, Zhenpeng Li, Zhe Li, Xu Li, Huihui Sun, Jie Li, Xin Lu, Weili Liang, Biao Kan

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Differential transcriptome analysis of the disease tolerant Madagascar–Malaysia crossbred black tiger shrimp, Penaeus monodon hepatopancreas in response to acute hepatopancreatic necrosis disease (AHPND) infection: inference on immune gene response and interaction

Tze Chiew Christie Soo, Sridevi Devadas, Mohamed Shariff Mohamed Din, Subha Bhassu

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Genotypic prevalence of norovirus GII in gastroenteritis outpatients in Shanghai from 2016 to 2018

Xiaozhou Kuang, Zheng Teng, Xi Zhang

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Synbiotic-like effect of linoleic acid overproducing Lactobacillus casei with berry phenolic extracts against pathogenesis of enterohemorrhagic Escherichia coli

Zajeba Tabashsum, Mengfei Peng, Cassendra Bernhardt, Puja Patel, Michael Carrion, Debabrata Biswas

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Differences in virulence gene expression between human blood and stool Campylobacter coli clade 1 ST828CC isolates

Cecilia Johansson, Anna Nilsson, René Kaden, Hilpi Rautelin

01.12.2019 | Short report | Ausgabe 1/2019 Open Access

Preliminary feasibility for recruiting and retaining black and white females to provide fecal samples for longitudinal research

Tiffany L. Carson, Rebecca B. Little, Sh’Nese Townsend

01.12.2019 | Case report | Ausgabe 1/2019 Open Access

First bloodstream infection caused by Prevotella copri in a heart failure elderly patient with Prevotella-dominated gut microbiota: a case report

Patrizia Posteraro, Flavio De Maio, Giulia Menchinelli, Ivana Palucci, Federica Maria Errico, Mariantonietta Carbone, Maurizio Sanguinetti, Antonio Gasbarrini, Brunella Posteraro

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Genome-wide mutation analysis of Helicobacter pylori after inoculation to Mongolian gerbils

Rumiko Suzuki, Kazuhito Satou, Akino Shiroma, Makiko Shimoji, Kuniko Teruya, Takashi Matsumoto, Junko Akada, Takashi Hirano, Yoshio Yamaoka

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Shiga toxin producing Escherichia coli-associated diarrhea and hemolytic uremic syndrome in young children in Romania

Oana Falup-Pecurariu, Raluca Ileana Lixandru, Emanuela Cojocaru, Katalin Csutak, Vlad Monescu, Khitam Muhsen, Cristian Falup-Pecurariu, Daniel Cohen

01.12.2019 | Review | Ausgabe 1/2019 Open Access

Metagenomics: aid to combat antimicrobial resistance in diarrhea

Rituparna De

01.12.2019 | Genome Report | Ausgabe 1/2019 Open Access

First complete genome sequence and comparative analysis of Salmonella enterica subsp. diarizonae serovar 61:k:1,5,(7) indicates host adaptation traits to sheep

Laura Uelze, Maria Borowiak, Carlus Deneke, Cécile Jacobs, István Szabó, Simon H. Tausch, Burkhard Malorny

01.12.2019 | Review | Ausgabe 1/2019 Open Access

Is there any association between gut microbiota and type 1 diabetes? A systematic review

Parnian Jamshidi, Saba Hasanzadeh, Azin Tahvildari, Yeganeh Farsi, Mahta Arbabi, João Felipe Mota, Leonardo A. Sechi, Mohammad Javad Nasiri

01.12.2019 | Correction | Ausgabe 1/2019 Open Access

Correction to: The pathogenic intestinal spirochaete Brachyspira pilosicoli forms a diverse recombinant species demonstrating some local clustering of related strains and potential for zoonotic spread

Eugene Neo, Tom La, Nyree Dale Phillips, Mohammad Yousef Alikani, David J. Hampson

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Evaluation of the Vibrant DNA microarray for the high-throughput multiplex detection of enteric pathogens in clinical samples

Yuanyuan Yang, Vinod Rajendran, Vasanth Jayaraman, Tianhao Wang, Kang Bei, Karthik Krishna, Karenah Rajasekaran, John J. Rajasekaran, Hari Krishnamurthy

01.12.2019 | Research | Ausgabe 1/2019 Open Access

Occurrence of Escherichia coli and faecal coliforms in drinking water at source and household point-of-use in Rohingya camps, Bangladesh

Zahid Hayat Mahmud, Md Shafiqul Islam, Khan Mohammad Imran, Syed Adnan Ibna Hakim, Martin Worth, Alvee Ahmed, Shanewaz Hossan, Maliha Haider, Mohammad Rafiqul Islam, Ferdous Hossain, Dara Johnston, Niyaz Ahmed

01.12.2019 | Research | Ausgabe 1/2019 Open Access

RstA, a two-component response regulator, plays important roles in multiple virulence-associated processes in enterohemorrhagic Escherichia coli O157:H7

Yutao Liu, Shujie Li, Wendi Li, Peisheng Wang, Peng Ding, Lingyu Li, Junyue Wang, Pan Yang, Qian Wang, Tingting Xu, Yingying Xiong, Bin Yang

01.12.2019 | Short report | Ausgabe 1/2019 Open Access

Hypervirulent clade 2, ribotype 019/sequence type 67 Clostridioides difficile strain from Japan

Ryoichi Saito, Yukino Usui, Alafate Ayibieke, Jun Nakajima, Isaac Prah, Kazunari Sonobe, Yoshibumi Aiso, Shiori Ito, Yasuhiro Itsui, Yoshiro Hadano, Yoko Nukui, Ryuji Koike, Shuji Tohda

01.12.2019 | Genome Report | Ausgabe 1/2019 Open Access

Complete genome analysis of clinical Shigella strains reveals plasmid pSS1653 with resistance determinants: a triumph of hybrid approach

Dhiviya Prabaa Muthuirulandi Sethuvel, Balaji Veeraraghavan, Karthick Vasudevan, Naveen Kumar Devanga Ragupathi, Dhivya Murugan, Kamini Walia, Shalini Anandan

01.12.2019 | Letter to the Editor | Ausgabe 1/2019 Open Access

Investigation of molecular mechanisms underlying tetracycline resistance in thermophilic Campylobacter spp. suggests that previous reports of tet(A)-mediated resistance in these bacteria are premature

Caoimhe Lynch, Kayleigh Hawkins, Helen Lynch, John Egan, Declan Bolton, Aidan Coffey, Brigid Lucey

01.12.2019 | Correction | Ausgabe 1/2019 Open Access

Correction to: Involvement of gut microbiome in human health and disease: brief overview, knowledge gaps and research opportunities

Dachao Liang, Ross Ka‑Kit Leung, Wenda Guan, William W. Au

01.12.2019 | Research | Ausgabe 1/2019 Open Access

The intestinal microbial community dissimilarity in hepatitis B virus-related liver cirrhosis patients with and without at alcohol consumption

Yong-Dong Deng, Xue-Bin Peng, Rong-Rong Zhao, Chao-Qun Ma, Jian-ning Li, Li-Qiong Yao

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