Skip to main content
Erschienen in: Archives of Virology 2/2020

11.12.2019 | Brief Report

Identification of rotavirus A strains in small ruminants: first detection of G8P[1] genotypes in sheep in Turkey

verfasst von: Mehmet Özkan Timurkan, Feray Alkan

Erschienen in: Archives of Virology | Ausgabe 2/2020

Einloggen, um Zugang zu erhalten

Abstract

Although members of rotavirus group A (RVA) are major enteric pathogens of humans and animals of many species, their impact on the health of small ruminants is not well documented. In this study, we conducted a molecular analysis of VP4, VP7, VP6 and NSP4 genes of RVAs detected using a commercial antigen ELISA in small ruminants with or without diarrhea in Turkey. Of the RVAs detected in sheep, one strain (Kutahya) was characterized as genotype G8P[1]-I2-E2. Two others (Ankara-1 and Ankara-2) were identified as NSP4 E2 and VP6 I2 genotypes, although they were untyped for the VP4 and VP7 genes. The RVAs from two goats were characterized as genotype G6P [1]-I2-E2. This is the first detection of in goats RVA genotypes G6P [1], which had previously only been found in cattle in Turkey, and of RVA in sheep. The study extends our current knowledge about the circulation of two RVA G genotypes, G6 and G8, in goat herds, and the detection of the G8 genotype in sheep in Turkey. This provides further information about the molecular epidemiology of RVAs in different animal species and indicates that additional surveillance programs are needed to determine the epidemiology of RVA in small ruminants and other species.
Anhänge
Nur mit Berechtigung zugänglich
Literatur
1.
Zurück zum Zitat Estes M, Kapikian A (2007) Rotaviruses. In: Knipe DM, Howley PM, Griffin DE, Lamb RA, Martin MA, Roizman B, Straus SE (eds) Fields virology, 4th edn. Kluwer/Lippincott, Williams and Wilkins, Philadelphia, pp 1917–1974 Estes M, Kapikian A (2007) Rotaviruses. In: Knipe DM, Howley PM, Griffin DE, Lamb RA, Martin MA, Roizman B, Straus SE (eds) Fields virology, 4th edn. Kluwer/Lippincott, Williams and Wilkins, Philadelphia, pp 1917–1974
2.
Zurück zum Zitat Matthijnssens J, Potgieter CA, Ciarlet M, Parreňo V, Martella V, Banyai K, Garaicoechea L, Palombo EA, Novo L, Zeller M, Arista S, Gerna G, Rahman M, Van Ranst M (2009) Are human P[14] Rotavirus strains the result of interspecies transmissions from sheep or other ungulates that belong to the mammalian order Artiodactyla? J Virol 83:2917–2929. https://doi.org/10.1128/JVI.02246-08 CrossRefPubMedPubMedCentral Matthijnssens J, Potgieter CA, Ciarlet M, Parreňo V, Martella V, Banyai K, Garaicoechea L, Palombo EA, Novo L, Zeller M, Arista S, Gerna G, Rahman M, Van Ranst M (2009) Are human P[14] Rotavirus strains the result of interspecies transmissions from sheep or other ungulates that belong to the mammalian order Artiodactyla? J Virol 83:2917–2929. https://​doi.​org/​10.​1128/​JVI.​02246-08 CrossRefPubMedPubMedCentral
7.
Zurück zum Zitat Martella V, Ciarlet M, Baselga R, Arista S, Elia G, Lorusso E, Banyai K, Terio V, Madio A, Ruggeri FM, Falcone E, Camero M, Decaro N, Buonavoglia C (2005) Sequence analysis of the VP7 and VP4 genes identifies a novel VP7 gene allele of porcine rotavirus, sharing a common evolutionary origin with human G2 rotavirus. Virology 337:111–123. https://doi.org/10.1016/j.virol.2005.03.031 CrossRefPubMed Martella V, Ciarlet M, Baselga R, Arista S, Elia G, Lorusso E, Banyai K, Terio V, Madio A, Ruggeri FM, Falcone E, Camero M, Decaro N, Buonavoglia C (2005) Sequence analysis of the VP7 and VP4 genes identifies a novel VP7 gene allele of porcine rotavirus, sharing a common evolutionary origin with human G2 rotavirus. Virology 337:111–123. https://​doi.​org/​10.​1016/​j.​virol.​2005.​03.​031 CrossRefPubMed
17.
Zurück zum Zitat Shen S, Burke B, Desselberger U (1993) Nucleotide sequences of the VP4 and VP7 genes of a Chinese lamb rotavirus: evidence for a new P type in a G10 type virus. Virology 197(1):497–500CrossRef Shen S, Burke B, Desselberger U (1993) Nucleotide sequences of the VP4 and VP7 genes of a Chinese lamb rotavirus: evidence for a new P type in a G10 type virus. Virology 197(1):497–500CrossRef
21.
Zurück zum Zitat Fitzgerald TA, Muñoz M, Wood A, Snodgrass DR (1995) Serological and genomic characterisation of group A rotaviruses from lambs. Arch Virol 140:1541–1548CrossRef Fitzgerald TA, Muñoz M, Wood A, Snodgrass DR (1995) Serological and genomic characterisation of group A rotaviruses from lambs. Arch Virol 140:1541–1548CrossRef
22.
Zurück zum Zitat Uriarte ELL, Badaracco A, Matthijnssens J, Zeller M, Heylen E, Manazza J, Miño S, Van Ranst M, Odeón A, Parreño V (2014) The first caprine rotavirus detected in Argentina displays genomic features resembling virus strains infecting members of the Bovidae and Camelidae. Vet Microbiol 171(1–2):189–197. https://doi.org/10.1016/j.vetmic.2014.03.013 CrossRef Uriarte ELL, Badaracco A, Matthijnssens J, Zeller M, Heylen E, Manazza J, Miño S, Van Ranst M, Odeón A, Parreño V (2014) The first caprine rotavirus detected in Argentina displays genomic features resembling virus strains infecting members of the Bovidae and Camelidae. Vet Microbiol 171(1–2):189–197. https://​doi.​org/​10.​1016/​j.​vetmic.​2014.​03.​013 CrossRef
23.
Zurück zum Zitat Pratelli A, Martella V, Tempesta M, Buonavoglia C (1999) Characterization by polymerase chain reaction of ruminant rotaviruses isolated in Italy. New Microbiol 22:105–109PubMed Pratelli A, Martella V, Tempesta M, Buonavoglia C (1999) Characterization by polymerase chain reaction of ruminant rotaviruses isolated in Italy. New Microbiol 22:105–109PubMed
26.
Zurück zum Zitat Legrottaglie R, Volpe A, Rizzi V, Agrimi P (1993) Isolation and identification of rotaviruses as aetiological agents of neonatal diarrhoea in kids. Electro-phoretical characterization by PAGE. New Microbiol 16:227–235PubMed Legrottaglie R, Volpe A, Rizzi V, Agrimi P (1993) Isolation and identification of rotaviruses as aetiological agents of neonatal diarrhoea in kids. Electro-phoretical characterization by PAGE. New Microbiol 16:227–235PubMed
28.
Zurück zum Zitat Alkan F, Burgu İ, Can-Şahna K, Çokçalışkan C (2004) Yenidoğan Buzağı İshallerine Karşı Ticari Aşı İle Aşılanan Sığırlardan Doğan Yavrularda Pasıf Bağışıklık Düzeyi. Ankara Üniv Vet Fak Derg 51(1):47–53 Alkan F, Burgu İ, Can-Şahna K, Çokçalışkan C (2004) Yenidoğan Buzağı İshallerine Karşı Ticari Aşı İle Aşılanan Sığırlardan Doğan Yavrularda Pasıf Bağışıklık Düzeyi. Ankara Üniv Vet Fak Derg 51(1):47–53
30.
Zurück zum Zitat Gouvea V, Glass RI, Woods P, Taniguchi K, Clark HF, Forrester B, Fang ZY (1990) Polymerase chain reaction amplification and typing of rotavirus nucleic acids from stool specimens. J Clin Microbiol 28:276–282CrossRef Gouvea V, Glass RI, Woods P, Taniguchi K, Clark HF, Forrester B, Fang ZY (1990) Polymerase chain reaction amplification and typing of rotavirus nucleic acids from stool specimens. J Clin Microbiol 28:276–282CrossRef
31.
Zurück zum Zitat Gouvea V, Santos N, Timenetsky MC (1994) Identification of bovine and porcine rotavirus G types by PCR. J Clin Microbiol 32:1338–1340CrossRef Gouvea V, Santos N, Timenetsky MC (1994) Identification of bovine and porcine rotavirus G types by PCR. J Clin Microbiol 32:1338–1340CrossRef
32.
Zurück zum Zitat Gentsch JR, Glaa RI, Woods P, Gouvea V, Gorziglia M, Flores J, Das BK, Bhan MK (1992) Identification of Group A rotavirus gene 4 types by polymerase chain reaction. J Clin Microbiol 30:1365–1373CrossRef Gentsch JR, Glaa RI, Woods P, Gouvea V, Gorziglia M, Flores J, Das BK, Bhan MK (1992) Identification of Group A rotavirus gene 4 types by polymerase chain reaction. J Clin Microbiol 30:1365–1373CrossRef
33.
Zurück zum Zitat Bányai K, Bogdán A, György S, Arista S, De Grazia S, Kang G, Banerjee I, Iturriza-Gómara M, Buonavoglia C, Martella V (2009) Assignment of the group A rotavirus NSP4 gene into genotypes using a hemi-nested multiplex PCR assay: a rapid and reproducible assay for strain surveillance studies. J Med Microbiol 58:303–311. https://doi.org/10.1099/jmm.0.005124-0 CrossRefPubMed Bányai K, Bogdán A, György S, Arista S, De Grazia S, Kang G, Banerjee I, Iturriza-Gómara M, Buonavoglia C, Martella V (2009) Assignment of the group A rotavirus NSP4 gene into genotypes using a hemi-nested multiplex PCR assay: a rapid and reproducible assay for strain surveillance studies. J Med Microbiol 58:303–311. https://​doi.​org/​10.​1099/​jmm.​0.​005124-0 CrossRefPubMed
34.
Zurück zum Zitat Iturriza-Gómara M, Wong C, Blome S, Desselberger U, Gray J (2002) Molecular characterization of VP6 genes of human rotavirus isolates: correlation of genogroups with subgroups and evidence of independent segregation. J Virol 76:6596–6601CrossRef Iturriza-Gómara M, Wong C, Blome S, Desselberger U, Gray J (2002) Molecular characterization of VP6 genes of human rotavirus isolates: correlation of genogroups with subgroups and evidence of independent segregation. J Virol 76:6596–6601CrossRef
38.
Zurück zum Zitat Ghosh S, Gatheru Z, Nyangao J, Adachi N, Urushibari N, Kobayashi N (2011) Full genomic analysis of a G8P[1] rotavirus strain isolated from an asymptomatic infant in Kenya provides evidence for an artiodactyl-to-human interspecies transmission event. J Med Virol 83:367–376. https://doi.org/10.1002/jmv.21974 CrossRefPubMed Ghosh S, Gatheru Z, Nyangao J, Adachi N, Urushibari N, Kobayashi N (2011) Full genomic analysis of a G8P[1] rotavirus strain isolated from an asymptomatic infant in Kenya provides evidence for an artiodactyl-to-human interspecies transmission event. J Med Virol 83:367–376. https://​doi.​org/​10.​1002/​jmv.​21974 CrossRefPubMed
39.
Zurück zum Zitat Kumar N, Malik YS, Sharma K, Dhama K, Ghosh S, Bányai K, Kobayashi N, Singh RK (2018) Molecular characterization of unusual bovine rotavirus A strains having high genetic relatedness with human rotavirus: evidence for zooanthroponotic transmission. Zoonoses Public Health 65(4):431–442. https://doi.org/10.1111/zph.12452 CrossRefPubMed Kumar N, Malik YS, Sharma K, Dhama K, Ghosh S, Bányai K, Kobayashi N, Singh RK (2018) Molecular characterization of unusual bovine rotavirus A strains having high genetic relatedness with human rotavirus: evidence for zooanthroponotic transmission. Zoonoses Public Health 65(4):431–442. https://​doi.​org/​10.​1111/​zph.​12452 CrossRefPubMed
41.
Zurück zum Zitat Singh U, Singh R, Singh AP, Yadav SK, Sircar S, Malik YS (2017) Detection and characterization of caprine and ovine rotaviruses, India. Indian J Anim Sci 87(11):1358–1361 Singh U, Singh R, Singh AP, Yadav SK, Sircar S, Malik YS (2017) Detection and characterization of caprine and ovine rotaviruses, India. Indian J Anim Sci 87(11):1358–1361
Metadaten
Titel
Identification of rotavirus A strains in small ruminants: first detection of G8P[1] genotypes in sheep in Turkey
verfasst von
Mehmet Özkan Timurkan
Feray Alkan
Publikationsdatum
11.12.2019
Verlag
Springer Vienna
Erschienen in
Archives of Virology / Ausgabe 2/2020
Print ISSN: 0304-8608
Elektronische ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-019-04476-7

Weitere Artikel der Ausgabe 2/2020

Archives of Virology 2/2020 Zur Ausgabe

Leitlinien kompakt für die Innere Medizin

Mit medbee Pocketcards sicher entscheiden.

Seit 2022 gehört die medbee GmbH zum Springer Medizin Verlag

Update Innere Medizin

Bestellen Sie unseren Fach-Newsletter und bleiben Sie gut informiert.