nach oben

Archives of Virology

Erschienen in:

01.11.2012 | Brief Report

Detection of cucumber mosaic virus isolates from banana by one-step reverse transcription loop-mediated isothermal amplification

verfasst von: Jun Peng, Minjing Shi, Zihao Xia, Junsheng Huang, Zaifeng Fan

Erschienen in: Archives of Virology | Ausgabe 11/2012

Einloggen, um Zugang zu erhalten

Abstract

Cucumber mosaic virus (CMV) is one of the most devastating threats to the banana industry. A single-tube, one-step reverse transcription loop-mediated isothermal amplification (RT-LAMP) assay was developed for the rapid detection of CMV-infected banana and plantain (Musa spp.). The reaction was performed in a single tube at 63 °C for 90 min using a real-time turbidimeter, with an improved closed-tube visual detection system in which fluorescent dye was added to the inside of the lid prior to amplification. This RT-LAMP assay is an alternative method for the rapid detection of CMV in banana plants and tissue culture materials.

Magee CJ (1930) A new virus disease of banana. Agric Gaz New South Wales 41:929–930

Niblett CL, Pappu SS, Bird J, Lastra R (1994) Infectious chlorosis, mosaic, and heart rot. Pages 18-19 in: Compendium of Tropical Fruit Diseases. R.C.Plotz, G.A. Zentmyer, W.T.Nishijima, K.G. Rohrbach, and H.D. Ohr, eds. American Phytopathological Society. St. Paul, Minn

Palukaitis P, Roossinck MJ, Dietzgen RG, Francki RIB (1992) Cucumber mosaic virus. Adv Virus Res 41:281–348PubMedCrossRef

Bujarski J, Figlerowicz M, Gallitelli D, Roossinck MJ, Scott SW (2012) Family Bromoviridae. In: King AMQ, Adams MJ, Carstens EB, Lefkowitz EJ (eds) Virus Taxonomy: ninth report of the international committee on the taxonomy of viruses. Elsevier Academic Press, San Diego, pp 965–976

Lot H, Marrou J, Quiot JB, Evan C (1972) A contribution to the study on cucumber mosaic virus (CMV) II. Quick method of purification. Ann Rev Phytopathol 4:25–38

Thomas JE (1991) Virus indexing procedures for banana in Australia. pp 144-157 In: Banana Diseases in Asia and the Pacific. Valmayor RV, Umali BE, Bejosano CP (Eds.), Proceedings of a Technical Meeting On Diseases Affecting Banana and Plantain In Asia and the Pacific, Brisbane, Australia, 15–18 April 1991. International Network for the Improvement of Banana and Plantain, Montpellier, France, 180 pp

Hu JS, Li HP, Barry K, Wang M (1995) Comparison of dot blot, ELISA, and RT-PCR assays for detection of two cucumber mosaic virus isolates infecting banana in Hawaii. Plant Dis 79(9):902–906CrossRef

Hsu HT, Barzuna L, Hsu YH, Bliss W, Perry KL (2000) Identification and subgrouping of Cucumber mosaic virus with mouse monoclonal antibodies. Phytopathology 90(6):615–620PubMedCrossRef

Yu C, Wu J, Zhou X (2005) Detection and subgrouping of Cucumber mosaic virus isolates by TAS-ELISA and immunocapture RT-PCR. J Virol Methods 123:155–161PubMedCrossRef

10.

Singh Z, Jones RAC, Jones MGK (1995) Identification of cucumber mosaic virus subgroup I isolates from banana plants affected by infectious chlorosis disease using RT-PCR. Plant Dis 79(7):713–716CrossRef

11.

Kouassi NK, Wendy M, Boonham N, Smith J (2010) Development of a diagnostic protocol for Cucumber mosaic virus for screening banana (Musa spp.) planting material in Ivory Coast. Proceedings of international conference on banana and plantain in Africa. Acta Hort 879:547–552

12.

Sharman M, Thomas JE, Dietzgen RG (2000) Development of a multiplex immunocapture PCR with colourimetric detection for viruses of banana. J Virol Methods 89:75–88PubMedCrossRef

13.

Notomi T, Okayama H, Masubuchi H, Yonekawa T, Watanabe K, Amino N, Hase T (2000) Loop-mediated isothermal amplification of DNA. Nucleic Acids Res 28:e63PubMedCrossRef

14.

Lee MS, Yang MJ, Hseu YC, Lai GH, Chang WT, Hsu YH, Lin MK (2011) One-step reverse transcription loop-mediated isothermal amplification assay for rapid detection of Cymbidium mosaic virus. J Virol Methods 173:43–48PubMedCrossRef

15.

Liu J, Huang CL, Wu ZY, Zhang XH, Wang YQ (2010) Detection of tomato aspermy virus infecting chrysanthemums by LAMP. Sci. Agric. Sin. 43(6):1288–1294

16.

Zhou T, Du LL, Fan YJ, Zhou YJ (2012) Reverse transcription loop-mediated isothermal amplification of RNA for sensitive and rapid detection of southern rice black-streaked dwarf virus. J Virol Methods 180:91–95PubMedCrossRef

17.

Liu YH, Wang ZD, Qian YM, Mu JM, Shen LI, Wang FL, Yan JG (2010) Rapid detection of tobacco mosaic virus using the reverse transcription loop-mediated isothermal amplification method. Arch Virol 155:1681–1685PubMedCrossRef

18.

Mori Y, Nagamine K, Tomita N, Notomi T (2001) Detection of loop-mediated isothermal amplification reaction by turbidity derived from magnesium pyrophosphate formation. Biochem Biophys Res Commun 289:150–154PubMedCrossRef

19.

Mori Y, Kitao M, Tomita N, Notomi T (2004) Real-time turbidimetry of LAMP reaction for quantifying template DNA. J Biochem Biophys Methods 59:145–157PubMedCrossRef

20.

Rodríguez-García CM, Peraza-Echeverría L, Islas-Flores IR, Canto-Canché BB, Grijalva-Arango R (2010) Isolation of retro-transcribed RNA from in vitro Mycosphaerella fijiensis-infected banana leaves. Genet Mol Res 9(3):1460–1468PubMedCrossRef

21.

Tomita N, Mori Y, Kanda H, Notomi T (2008) Loop-mediated isothermal amplification (LAMP) of gene sequences and simple visual detection of products. Nat Protoc 3(5):877–882PubMedCrossRef

22.

Fukuta S, Nimi Y, Oishi K, Yoshimura Y, Anai N, Hotta M, Fukaya M, Kato T, Oya T, Kambe M (2005) Development of reverse transcription loop-mediated isothermal amplification (RT-LAMP) method for detection of two viruses and chrysanthemum stunt viroid. Ann Rep Kansai Plant Protect 47:31–36CrossRef

23.

Matsui K, Ishii N, Honjo M, Kawabata Z (2004) Use of the SYBR Green I fluorescent dye and a centrifugal filter device for rapid determination of dissolved DNA concentration in fresh water. Aquat Microb Ecol 36:99–105CrossRef

24.

Goto M, Honda E, Ogura A, Nomoto A, Hanaki K (2008) Colorimetric detection of loop-mediated isothermal amplification reaction by using hydroxy naphthol blue. Biotechniques 46:167–172CrossRef

25.

Tao ZY, Zhou HY, Xia H, Xu S, Zhu HW, Culleton RL, Han ET, Lu F, Fang Q, Gu YP, Liu YB, Zhu GD, Wang WM, Li JL, Cao J, Gao Q (2011) Adaptation of a visualized loop-mediated isothermal amplification technique for field detection of Plasmodium vivax infection. Parasites Vectors 4:115PubMedCrossRef

Titel: Detection of cucumber mosaic virus isolates from banana by one-step reverse transcription loop-mediated isothermal amplification
verfasst von: Jun Peng
Minjing Shi
Zihao Xia
Junsheng Huang
Zaifeng Fan
Publikationsdatum: 01.11.2012
Verlag: Springer Vienna
Erschienen in: Archives of Virology / Ausgabe 11/2012
Print ISSN: 0304-8608
Elektronische ISSN: 1432-8798
DOI: https://doi.org/10.1007/s00705-012-1376-x

Leitlinien kompakt für die Innere Medizin

Mit medbee Pocketcards sicher entscheiden.

^{Seit 2022 gehört die medbee GmbH zum Springer Medizin Verlag}

Kostenlos registrieren

Neu im Fachgebiet Innere Medizin

25.04.2024 | Hypertonie | Nachrichten

Update Innere Medizin

Bestellen Sie unseren Fach-Newsletter und bleiben Sie gut informiert.

Newsletter bestellen

Springer Medizin

Detection of cucumber mosaic virus isolates from banana by one-step reverse transcription loop-mediated isothermal amplification

Abstract

Leitlinien kompakt für die Innere Medizin

Neu im Fachgebiet Innere Medizin

Therapiestart mit Blutdrucksenkern erhöht Frakturrisiko

Adjuvante Immuntherapie verlängert Leben bei RCC

Alectinib verbessert krankheitsfreies Überleben bei ALK-positivem NSCLC

Metformin rückt in den Hintergrund

Update Innere Medizin

Springer Medizin

Abstract

Bitte loggen Sie sich ein, um Zugang zu diesem Inhalt zu erhalten

Weitere Artikel der Ausgabe 11/2012

Experimental infection of laboratory-bred bank voles (Myodes glareolus) with murid herpesvirus 4

Biology of fowl adenovirus type 1 infection of heterologous cells

Differential expression of the Toll-like receptor pathway and related genes of chicken bursa after experimental infection with infectious bursa disease virus

Co-detection in the pathogenesis of severe hand-foot-mouth disease

Establishment and maintenance of persistent infection by picobirnavirus in greater rhea (Rhea Americana)

Highly pathogenic avian influenza (H5N1) in Myanmar, 2006-2010

Leitlinien kompakt für die Innere Medizin

Neu im Fachgebiet Innere Medizin

Therapiestart mit Blutdrucksenkern erhöht Frakturrisiko

Adjuvante Immuntherapie verlängert Leben bei RCC

Alectinib verbessert krankheitsfreies Überleben bei ALK-positivem NSCLC

Metformin rückt in den Hintergrund

Update Innere Medizin