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Erschienen in: Archives of Virology 12/2014

01.12.2014 | Annotated Sequence Record

Complete genomic sequence of the Vibrio alginolyticus lytic bacteriophage PVA1

verfasst von: Jiancheng Zhang, Zhenhui Cao, Yongping Xu, Xiaoyu Li, Huaqiang Li, Feifei Wu, Lili Wang, Fang Cao, Zhen Li, Shuying Li, Liji Jin

Erschienen in: Archives of Virology | Ausgabe 12/2014

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Abstract

A novel Vibrio alginolyticus lytic bacteriophage was isolated from sewage samples obtained from a local aquatic market. Morphological analysis revealed that the phage, designated as PVA1, belonged to the family Podoviridae. The complete genomic sequence of phage PVA1 contained 41,529 bp with a G + C content of 43.7 % and 75 putative open reading frames. The genome was grouped into four modules, including phage structure, DNA packaging, DNA replication and regulation, and some additional functions. Further genomic comparison of the phage PVA1 with other known phages showed no significant similarities. Genes related to virulence and lysogeny were not detected in the phage genome. Our results suggest that phage PVA1 may be classified as a new Vibrio phage. We believe that these phage genomic sequence data will provide useful basic information for further molecular research on this Vibrio phage and its host as well for determining its infection/interaction mechanisms.
Literatur
1.
Zurück zum Zitat Adams MH (1959) Bacteriophages. Interscience Publishers, New York Adams MH (1959) Bacteriophages. Interscience Publishers, New York
4.
Zurück zum Zitat Carlson K (2005) Working with bacteriophages: common techniques and methodological approaches. In: Kutter E, Sulakvelidze A (eds) Bacteriophages: biology and application. CRC Press, Boca Raton Carlson K (2005) Working with bacteriophages: common techniques and methodological approaches. In: Kutter E, Sulakvelidze A (eds) Bacteriophages: biology and application. CRC Press, Boca Raton
9.
Zurück zum Zitat González-Escalona N, Blackstone GM, DePaola A (2006) Characterization of a Vibrio alginolyticus strain, isolated from Alaskan oysters, carrying a hemolysin gene similar to the thermostable direct hemolysin-related hemolysin gene (trh) of Vibrio parahaemolyticus. Appl Environ Microb 72:7925–7929. doi:10.1128/AEM.01548-06 CrossRef González-Escalona N, Blackstone GM, DePaola A (2006) Characterization of a Vibrio alginolyticus strain, isolated from Alaskan oysters, carrying a hemolysin gene similar to the thermostable direct hemolysin-related hemolysin gene (trh) of Vibrio parahaemolyticus. Appl Environ Microb 72:7925–7929. doi:10.​1128/​AEM.​01548-06 CrossRef
11.
Zurück zum Zitat Hornstrup MK, Gahrn-Hansen B (1994) Extraintestinal infections caused by Vibrio parahaemolyticus and Vibrio alginolyticus in a Danish county 1987-1992. Ugeskrift Laeger 156:5279. doi:10.3109/00365549309008571 Hornstrup MK, Gahrn-Hansen B (1994) Extraintestinal infections caused by Vibrio parahaemolyticus and Vibrio alginolyticus in a Danish county 1987-1992. Ugeskrift Laeger 156:5279. doi:10.​3109/​0036554930900857​1
18.
Zurück zum Zitat Nakamura K, Kakimoto D, Swafford J, Johnson R (1978) Studies on the characteristics of the bacteriophages of Vibrio alginolyticus strain B-1 isolated from Kinko Bay. Mem Fac Fish Kagoshima Univ 27:59–64 Nakamura K, Kakimoto D, Swafford J, Johnson R (1978) Studies on the characteristics of the bacteriophages of Vibrio alginolyticus strain B-1 isolated from Kinko Bay. Mem Fac Fish Kagoshima Univ 27:59–64
21.
Zurück zum Zitat Sambrook J, Russell DW (2001) Molecular cloning: a laboratory manual. CSHL press, New York Sambrook J, Russell DW (2001) Molecular cloning: a laboratory manual. CSHL press, New York
Metadaten
Titel
Complete genomic sequence of the Vibrio alginolyticus lytic bacteriophage PVA1
verfasst von
Jiancheng Zhang
Zhenhui Cao
Yongping Xu
Xiaoyu Li
Huaqiang Li
Feifei Wu
Lili Wang
Fang Cao
Zhen Li
Shuying Li
Liji Jin
Publikationsdatum
01.12.2014
Verlag
Springer Vienna
Erschienen in
Archives of Virology / Ausgabe 12/2014
Print ISSN: 0304-8608
Elektronische ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-014-2207-z

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