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01.12.2017 | Annotated Sequence Record

Detection in Japan of an equine-like G3P[8] reassortant rotavirus A strain that is highly homologous to European strains across all genome segments

verfasst von: Wakako Kikuchi, Toyoko Nakagomi, Punita Gauchan, Chantal Ama Agbemabiese, Atsuko Noguchi, Osamu Nakagomi, Tsutomu Takahashi

Erschienen in: Archives of Virology | Ausgabe 3/2018

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Abstract

Equine-like G3P[8] rotavirus A strains with DS-1-like backbone genes have emerged since 2013. An equine-like RVA/Human-wt/JPN/15R429/2015/G3P[8] strain possessing I2-R2-C2-M2-A2-N2-T2-E2-H2 was detected in Japan in 2015. Its VP7 gene was ≥ 99.3% identical to those of equine-like G3P[4] strains detected in Japan, and the remaining 10 genes were 98.6-99.8% identical to G1P[8] double-gene reassortants detected in Japan, Thailand and the Philippines. Thus, 15R429 was likely generated through reassortment between the equine-like G3P[4] and G1P[8] reassortant strains. Notably, 15R429 was 98.5-99.8% identical across all 11 genes of the equine-like G3P[8] strains detected in Spain and Hungary in 2015.

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Titel: Detection in Japan of an equine-like G3P[8] reassortant rotavirus A strain that is highly homologous to European strains across all genome segments
verfasst von: Wakako Kikuchi
Toyoko Nakagomi
Punita Gauchan
Chantal Ama Agbemabiese
Atsuko Noguchi
Osamu Nakagomi
Tsutomu Takahashi
Publikationsdatum: 01.12.2017
Verlag: Springer Vienna
Erschienen in: Archives of Virology / Ausgabe 3/2018
Print ISSN: 0304-8608
Elektronische ISSN: 1432-8798
DOI: https://doi.org/10.1007/s00705-017-3668-7

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Detection in Japan of an equine-like G3P[8] reassortant rotavirus A strain that is highly homologous to European strains across all genome segments

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