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Archives of Virology

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21.04.2018 | Brief Report

Screening of some Croatian autochthonous grapevine varieties reveals a multitude of viruses, including novel ones

verfasst von: Darko Vončina, Rodrigo P. P. Almeida

Erschienen in: Archives of Virology | Ausgabe 8/2018

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Abstract

Next-generation sequencing of total RNA samples from four Croatian autochthonous grapevine varieties revealed the presence of a novel virus in two grapevine accessions. The complete genome sequence of a novel virus, tentatively named “grapevine badnavirus 1” (GBV-1), was reconstructed from a de novo-assembled contig. GBV-1 has a genome of 7,145 nucleotides containing three ORFs with sequence similarity to other badnaviruses. In addition, several other viruses and viroids, including grapevine virus G, grapevine virus K/D, grapevine virus T, grapevine Roditis leaf discoloration-associated virus, grapevine yellow speckle viroids 1 and 2, and hop stunt viroid were detected and identified for the first time in Croatian grapevines in the course of this study.

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Titel: Screening of some Croatian autochthonous grapevine varieties reveals a multitude of viruses, including novel ones
verfasst von: Darko Vončina
Rodrigo P. P. Almeida
Publikationsdatum: 21.04.2018
Verlag: Springer Vienna
Erschienen in: Archives of Virology / Ausgabe 8/2018
Print ISSN: 0304-8608
Elektronische ISSN: 1432-8798
DOI: https://doi.org/10.1007/s00705-018-3850-6

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Screening of some Croatian autochthonous grapevine varieties reveals a multitude of viruses, including novel ones

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