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Erschienen in: Metabolic Brain Disease 3/2017

11.02.2017 | Original Article

Ras-like without CAAX 2 (RIT2): a susceptibility gene for autism spectrum disorder

verfasst von: Shima Yazdandoost Hamedani, Jalal Gharesouran, Rezvan Noroozi, Arezou Sayad, Mir Davood Omrani, Atefeh Mir, Sarah Sadat Aghabozrg Afjeh, Mehdi Toghi, Saba Manoochehrabadi, Soudeh Ghafouri-Fard, Mohammad Taheri

Erschienen in: Metabolic Brain Disease | Ausgabe 3/2017

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Abstract

Ras-like without CAAX2 (RIT2) which encodes a GTP-binding protein has recently been reported as a new susceptibility gene for Autism Spectrum Disorders (ASD) in a genome-wide association study. Since the gene is suggested to be involved in the pathogenesis of different neurological diseases, we investigated the association of two single nucleotide polymorphisms (SNP) rs16976358 and rs4130047 of this gene with ASD in Iranian patients. A total of 1004 individuals, comprising 532 ASD cases and 472 healthy subjects participated in this study. Allele frequency analyses showed significant over-presentation of rs16976358-C allele in cases versus controls (P < 0.0001). In addition, rs16976358 CC genotype (OR (95% CI) =3.57(1.72–7.69) and P < 0.0001) and rs4130047 CC genotype (OR (95% CI) =0.64(0.43–0.97) and P = 0.035) were associated with ASD in recessive inheritance model. Besides, haplotype analysis demonstrated an association between the C/T haplotype block (rs16976358/rs4130047) and ASD (OR (95%CI) = 0.44 (0.31–0.62), P < 0.0001). Altogether, our findings provided additional confirmation for the RIT2 gene participation in ASD risk and suggested the rs16976358 variant as a possible genetic risk factor for this disorder.
Literatur
Zurück zum Zitat Bossers K, Meerhoff G, Balesar R, Van Dongen JW, Kruse CG, Swaab DF, Verhaagen J (2009) Analysis of gene expression in Parkinson's disease: possible involvement of neurotrophic support and axon guidance in dopaminergic cell death. Brain Pathol 19:91–107CrossRefPubMed Bossers K, Meerhoff G, Balesar R, Van Dongen JW, Kruse CG, Swaab DF, Verhaagen J (2009) Analysis of gene expression in Parkinson's disease: possible involvement of neurotrophic support and axon guidance in dopaminergic cell death. Brain Pathol 19:91–107CrossRefPubMed
Zurück zum Zitat Burbach JPH, VAN Der Zwaag B (2009) Contact in the genetics of autism and schizophrenia. Trends Neurosci 32:69–72CrossRefPubMed Burbach JPH, VAN Der Zwaag B (2009) Contact in the genetics of autism and schizophrenia. Trends Neurosci 32:69–72CrossRefPubMed
Zurück zum Zitat Collins A, Ke X (2012) Primer1: primer design web service for tetra-primer ARMS-PCR. The Open Bioinformatics Journal 6:55–58CrossRef Collins A, Ke X (2012) Primer1: primer design web service for tetra-primer ARMS-PCR. The Open Bioinformatics Journal 6:55–58CrossRef
Zurück zum Zitat Do CB, Tung JY, Dorfman E, Kiefer AK, Drabant EM, Francke U, Mountain JL, Goldman SM, Tanner CM, Langston JW (2011) Web-based genome-wide association study identifies two novel loci and a substantial genetic component for Parkinson's disease. PLoS Genet 7:e1002141CrossRefPubMedPubMedCentral Do CB, Tung JY, Dorfman E, Kiefer AK, Drabant EM, Francke U, Mountain JL, Goldman SM, Tanner CM, Langston JW (2011) Web-based genome-wide association study identifies two novel loci and a substantial genetic component for Parkinson's disease. PLoS Genet 7:e1002141CrossRefPubMedPubMedCentral
Zurück zum Zitat Emamalizadeh B, Jamshidi J, Movafagh A, Ohadi M, Kazeminasab S, Biglarian A, Taghavi S, Motallebi M, Fazeli A, Ahmadifard A (2016) RIT2 polymorphisms: is there a differential association? Mol Neurobiol:1–7 Emamalizadeh B, Jamshidi J, Movafagh A, Ohadi M, Kazeminasab S, Biglarian A, Taghavi S, Motallebi M, Fazeli A, Ahmadifard A (2016) RIT2 polymorphisms: is there a differential association? Mol Neurobiol:1–7
Zurück zum Zitat Glessner JT, Connolly JJ, Hakonarson H (2014) Genome-wide association studies of autism. Current Behavioral Neuroscience Reports 1:234–241CrossRef Glessner JT, Connolly JJ, Hakonarson H (2014) Genome-wide association studies of autism. Current Behavioral Neuroscience Reports 1:234–241CrossRef
Zurück zum Zitat Hamshere ML, Walters JTR, Smith R, Richards AL, Green E, Grozeva D, JONES I, Forty L, Jones L, Gordon-Smith K (2013) Genome-wide significant associations in schizophrenia to ITIH3/4, CACNA1C and SDCCAG8, and extensive replication of associations reported by the schizophrenia PGC. Mol Psychiatry 18:708–712CrossRefPubMed Hamshere ML, Walters JTR, Smith R, Richards AL, Green E, Grozeva D, JONES I, Forty L, Jones L, Gordon-Smith K (2013) Genome-wide significant associations in schizophrenia to ITIH3/4, CACNA1C and SDCCAG8, and extensive replication of associations reported by the schizophrenia PGC. Mol Psychiatry 18:708–712CrossRefPubMed
Zurück zum Zitat Iossifov I, Zheng T, Baron M, Gilliam TC, Rzhetsky A (2008) Genetic-linkage mapping of complex hereditary disorders to a whole-genome molecular-interaction network. Genome Res 18:1150–1162CrossRefPubMedPubMedCentral Iossifov I, Zheng T, Baron M, Gilliam TC, Rzhetsky A (2008) Genetic-linkage mapping of complex hereditary disorders to a whole-genome molecular-interaction network. Genome Res 18:1150–1162CrossRefPubMedPubMedCentral
Zurück zum Zitat Kirov G, Gumus D, Chen W, Norton N, Georgieva L, Sari M, O’donovan MC, Erdogan F, Owen MJ, Ropers H-H (2008) Comparative genome hybridization suggests a role for NRXN1 and APBA2 in schizophrenia. Hum Mol Genet 17:458–465CrossRefPubMed Kirov G, Gumus D, Chen W, Norton N, Georgieva L, Sari M, O’donovan MC, Erdogan F, Owen MJ, Ropers H-H (2008) Comparative genome hybridization suggests a role for NRXN1 and APBA2 in schizophrenia. Hum Mol Genet 17:458–465CrossRefPubMed
Zurück zum Zitat Krumm N, O’roak BJ, Shendure J, Eichler EE (2014) A de novo convergence of autism genetics and molecular neuroscience. Trends Neurosci 37:95–105CrossRefPubMed Krumm N, O’roak BJ, Shendure J, Eichler EE (2014) A de novo convergence of autism genetics and molecular neuroscience. Trends Neurosci 37:95–105CrossRefPubMed
Zurück zum Zitat Li J, Zhao L, You Y, Lu T, Jia M, Yu H, Ruan Y, Yue W, Liu J, Lu L (2015) Schizophrenia related variants in CACNA1C also confer risk of autism. PLoS One 10:e0133247CrossRefPubMedPubMedCentral Li J, Zhao L, You Y, Lu T, Jia M, Yu H, Ruan Y, Yue W, Liu J, Lu L (2015) Schizophrenia related variants in CACNA1C also confer risk of autism. PLoS One 10:e0133247CrossRefPubMedPubMedCentral
Zurück zum Zitat Lin C-H, Chen M-L, Yu C-Y, Wu R-M (2013) RIT2 variant is not associated with Parkinson's disease in a Taiwanese population. Neurobiology of Aging 34:2236. e1–2236. e3CrossRef Lin C-H, Chen M-L, Yu C-Y, Wu R-M (2013) RIT2 variant is not associated with Parkinson's disease in a Taiwanese population. Neurobiology of Aging 34:2236. e1–2236. e3CrossRef
Zurück zum Zitat Liu X, Shimada T, Otowa T, Wu YY, Kawamura Y, Tochigi M, Iwata Y, Umekage T, Toyota T, Maekawa M. (2015a). Genome-wide association study of autism Spectrum disorder in the east Asian populations. Autism Research 9(3):340-349 Liu X, Shimada T, Otowa T, Wu YY, Kawamura Y, Tochigi M, Iwata Y, Umekage T, Toyota T, Maekawa M. (2015a). Genome-wide association study of autism Spectrum disorder in the east Asian populations. Autism Research 9(3):340-349
Zurück zum Zitat Liu Z-H, Guo J-F, Wang Y-Q, Li K, Sun Q-Y, Yan X-X, Xu C-S, Tang B-S (2015b) Assessment of RIT2 rs12456492 association with Parkinson's disease in Mainland China. Neurobiology of Aging 36:1600. e9–1600. e11CrossRef Liu Z-H, Guo J-F, Wang Y-Q, Li K, Sun Q-Y, Yan X-X, Xu C-S, Tang B-S (2015b) Assessment of RIT2 rs12456492 association with Parkinson's disease in Mainland China. Neurobiology of Aging 36:1600. e9–1600. e11CrossRef
Zurück zum Zitat Lu Y, Liu W, Tan K, Peng J, Zhu Y, Wang X (2015) Genetic association of RIT2 rs12456492 polymorphism and Parkinson’s disease susceptibility in Asian populations: a meta-analysis. Scientific reports 5. doi:10.1038/srep13805 Lu Y, Liu W, Tan K, Peng J, Zhu Y, Wang X (2015) Genetic association of RIT2 rs12456492 polymorphism and Parkinson’s disease susceptibility in Asian populations: a meta-analysis. Scientific reports 5. doi:10.​1038/​srep13805
Zurück zum Zitat Marshall CR, Noor A, Vincent JB, Lionel AC, Feuk L, Skaug J, Shago M, Moessner R, Pinto D, Ren Y (2008) Structural variation of chromosomes in autism spectrum disorder. Am J Hum Genet 82:477–488CrossRefPubMedPubMedCentral Marshall CR, Noor A, Vincent JB, Lionel AC, Feuk L, Skaug J, Shago M, Moessner R, Pinto D, Ren Y (2008) Structural variation of chromosomes in autism spectrum disorder. Am J Hum Genet 82:477–488CrossRefPubMedPubMedCentral
Zurück zum Zitat Mitin N, Rossman KL, DER CJ (2005) Signaling interplay in Ras superfamily function. Curr Biol 15:R563–R574CrossRefPubMed Mitin N, Rossman KL, DER CJ (2005) Signaling interplay in Ras superfamily function. Curr Biol 15:R563–R574CrossRefPubMed
Zurück zum Zitat Navaroli DM, Stevens ZH, Uzelac Z, Gabriel L, King MJ, Lifshitz LM, Sitte HH, Melikian HE (2011) The plasma membrane-associated GTPase Rin interacts with the dopamine transporter and is required for protein kinase C-regulated dopamine transporter trafficking. J Neurosci 31:13758–13770CrossRefPubMedPubMedCentral Navaroli DM, Stevens ZH, Uzelac Z, Gabriel L, King MJ, Lifshitz LM, Sitte HH, Melikian HE (2011) The plasma membrane-associated GTPase Rin interacts with the dopamine transporter and is required for protein kinase C-regulated dopamine transporter trafficking. J Neurosci 31:13758–13770CrossRefPubMedPubMedCentral
Zurück zum Zitat Nie K, Feng S-J, Tang H-M, Ma G-X, Gan R, Zhao X, Zhao J-H, Wang L-M, Huang Z-H, Huang J (2015) RIT2 polymorphism is associated with Parkinson's disease in a Han Chinese population. Neurobiology of Aging 36:1603. e15–1603. e17CrossRef Nie K, Feng S-J, Tang H-M, Ma G-X, Gan R, Zhao X, Zhao J-H, Wang L-M, Huang Z-H, Huang J (2015) RIT2 polymorphism is associated with Parkinson's disease in a Han Chinese population. Neurobiology of Aging 36:1603. e15–1603. e17CrossRef
Zurück zum Zitat Noroozi R, Taheri M, Movafagh A, Mirfakhraie R, Solgi G, Sayad A, Mazdeh M, Darvish H (2016) Glutamate receptor, metabotropic 7 (GRM7) gene variations and susceptibility to autism: a case–control study. Autism Res 9:1161–1168 Noroozi R, Taheri M, Movafagh A, Mirfakhraie R, Solgi G, Sayad A, Mazdeh M, Darvish H (2016) Glutamate receptor, metabotropic 7 (GRM7) gene variations and susceptibility to autism: a case–control study. Autism Res 9:1161–1168
Zurück zum Zitat Pankratz N, Beecham GW, Destefano AL, Dawson TM, Doheny KF, Factor SA, Hamza TH, Hung AY, Hyman BT, Ivinson AJ (2012) Meta-analysis of Parkinson's disease: identification of a novel locus, RIT2. Ann Neurol 71:370–384CrossRefPubMedPubMedCentral Pankratz N, Beecham GW, Destefano AL, Dawson TM, Doheny KF, Factor SA, Hamza TH, Hung AY, Hyman BT, Ivinson AJ (2012) Meta-analysis of Parkinson's disease: identification of a novel locus, RIT2. Ann Neurol 71:370–384CrossRefPubMedPubMedCentral
Zurück zum Zitat Ronemus M, Iossifov I, Levy D, Wigler M (2014) The role of de novo mutations in the genetics of autism spectrum disorders. Nat Rev Genet 15:133–141CrossRefPubMed Ronemus M, Iossifov I, Levy D, Wigler M (2014) The role of de novo mutations in the genetics of autism spectrum disorders. Nat Rev Genet 15:133–141CrossRefPubMed
Zurück zum Zitat Rosenfeld JA, Ballif BC, Torchia BS, Sahoo T, Ravnan JB, Schultz R, Lamb A, Bejjani BA, Shaffer LG (2010) Copy number variations associated with autism spectrum disorders contribute to a spectrum of neurodevelopmental disorders. Genetics in Medicine 12:694–702CrossRefPubMed Rosenfeld JA, Ballif BC, Torchia BS, Sahoo T, Ravnan JB, Schultz R, Lamb A, Bejjani BA, Shaffer LG (2010) Copy number variations associated with autism spectrum disorders contribute to a spectrum of neurodevelopmental disorders. Genetics in Medicine 12:694–702CrossRefPubMed
Zurück zum Zitat Safari MR, Omrani MD, Noroozi R, Sayad A, Sarrafzadeh S, Komaki A, Manjili FA, Mazdeh M, Ghaleiha A, Taheri M (2016) Synaptosome-associated protein 25 (SNAP25) gene association analysis revealed risk variants for ASD, in Iranian population. J Mol Neurosci 1–7. doi:10.1007/s12031-016-0860-2 Safari MR, Omrani MD, Noroozi R, Sayad A, Sarrafzadeh S, Komaki A, Manjili FA, Mazdeh M, Ghaleiha A, Taheri M (2016) Synaptosome-associated protein 25 (SNAP25) gene association analysis revealed risk variants for ASD, in Iranian population. J Mol Neurosci 1–7. doi:10.​1007/​s12031-016-0860-2
Zurück zum Zitat Safari MR, GHAFOURI-Fard S, Noroozi R, Sayad A, Omrani MD, Komaki A, Eftekharian MM, Taheri M (2017) FOXP3 gene variations and susceptibility to autism: a case–control study. Gene 596:119–122CrossRefPubMed Safari MR, GHAFOURI-Fard S, Noroozi R, Sayad A, Omrani MD, Komaki A, Eftekharian MM, Taheri M (2017) FOXP3 gene variations and susceptibility to autism: a case–control study. Gene 596:119–122CrossRefPubMed
Zurück zum Zitat Shaw C, Sheth S, Li D, Tomljenovic L (2014) Etiology of autism spectrum disorders: genes, environment, or both. OA Autism 2(2):11 Shaw C, Sheth S, Li D, Tomljenovic L (2014) Etiology of autism spectrum disorders: genes, environment, or both. OA Autism 2(2):11
Zurück zum Zitat Sole X, Guinó E, Valls J, Iniesta R, Moreno V (2006) SNPStats: a web tool for the analysis of association studies. Bioinformatics 22:1928–1929CrossRefPubMed Sole X, Guinó E, Valls J, Iniesta R, Moreno V (2006) SNPStats: a web tool for the analysis of association studies. Bioinformatics 22:1928–1929CrossRefPubMed
Zurück zum Zitat Tager-Flusberg H, Paul R, Lord C (2005) Language and communication in autism. Handbook of autism and pervasive developmental disorders 1:335–364 Tager-Flusberg H, Paul R, Lord C (2005) Language and communication in autism. Handbook of autism and pervasive developmental disorders 1:335–364
Zurück zum Zitat Takai Y, Sasaki T, Matozaki T (2001) Small GTP-binding proteins. Physiol Rev 81:153–208PubMed Takai Y, Sasaki T, Matozaki T (2001) Small GTP-binding proteins. Physiol Rev 81:153–208PubMed
Zurück zum Zitat Vigil D, Cherfils J, Rossman KL, Der CJ (2010) Ras superfamily GEFs and GAPs: validated and tractable targets for cancer therapy? Nat Rev Cancer 10:842–857CrossRefPubMedPubMedCentral Vigil D, Cherfils J, Rossman KL, Der CJ (2010) Ras superfamily GEFs and GAPs: validated and tractable targets for cancer therapy? Nat Rev Cancer 10:842–857CrossRefPubMedPubMedCentral
Zurück zum Zitat Wang J-Y, Gong M-Y, Ye Y-L, Ye J-M, Lin G-L, Zhuang Q-Q, Zhang X, Zhu J-H (2015) The RIT2 and STX1B polymorphisms are associated with Parkinson's disease. Parkinsonism Relat Disord 21:300–302CrossRefPubMed Wang J-Y, Gong M-Y, Ye Y-L, Ye J-M, Lin G-L, Zhuang Q-Q, Zhang X, Zhu J-H (2015) The RIT2 and STX1B polymorphisms are associated with Parkinson's disease. Parkinsonism Relat Disord 21:300–302CrossRefPubMed
Zurück zum Zitat Ward LD, KELLIS M (2012) HaploReg: a resource for exploring chromatin states, conservation, and regulatory motif alterations within sets of genetically linked variants. Nucleic Acids Res 40:D930–D934CrossRefPubMed Ward LD, KELLIS M (2012) HaploReg: a resource for exploring chromatin states, conservation, and regulatory motif alterations within sets of genetically linked variants. Nucleic Acids Res 40:D930–D934CrossRefPubMed
Zurück zum Zitat Yang W, Liu J, Zheng F, JIA M, Zhao L, Lu T, Ruan Y, Zhang J, Yue W, Zhang D (2013) The evidence for association of ATP2B2 polymorphisms with autism in Chinese Han population. PLoS One 8:e61021CrossRefPubMedPubMedCentral Yang W, Liu J, Zheng F, JIA M, Zhao L, Lu T, Ruan Y, Zhang J, Yue W, Zhang D (2013) The evidence for association of ATP2B2 polymorphisms with autism in Chinese Han population. PLoS One 8:e61021CrossRefPubMedPubMedCentral
Zurück zum Zitat Zhang L, Wahlin K, Li Y, Masuda T, Yang Z, Zack DJ, Esumi N (2013) RIT2, a neuron-specific small guanosine triphosphatase, is expressed in retinal neuronal cells and its promoter is modulated by the POU4 transcription factors. Mol Vis 19:1371–1386PubMedPubMedCentral Zhang L, Wahlin K, Li Y, Masuda T, Yang Z, Zack DJ, Esumi N (2013) RIT2, a neuron-specific small guanosine triphosphatase, is expressed in retinal neuronal cells and its promoter is modulated by the POU4 transcription factors. Mol Vis 19:1371–1386PubMedPubMedCentral
Zurück zum Zitat Zhang X, Niu M, Li H, Xie A (2015) RIT2 rs12456492 polymorphism and the risk of Parkinson’s disease: a meta-analysis. Neurosci Lett 602:167–171CrossRefPubMed Zhang X, Niu M, Li H, Xie A (2015) RIT2 rs12456492 polymorphism and the risk of Parkinson’s disease: a meta-analysis. Neurosci Lett 602:167–171CrossRefPubMed
Metadaten
Titel
Ras-like without CAAX 2 (RIT2): a susceptibility gene for autism spectrum disorder
verfasst von
Shima Yazdandoost Hamedani
Jalal Gharesouran
Rezvan Noroozi
Arezou Sayad
Mir Davood Omrani
Atefeh Mir
Sarah Sadat Aghabozrg Afjeh
Mehdi Toghi
Saba Manoochehrabadi
Soudeh Ghafouri-Fard
Mohammad Taheri
Publikationsdatum
11.02.2017
Verlag
Springer US
Erschienen in
Metabolic Brain Disease / Ausgabe 3/2017
Print ISSN: 0885-7490
Elektronische ISSN: 1573-7365
DOI
https://doi.org/10.1007/s11011-017-9969-4

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