Skip to main content
Erschienen in: Infection 2/2018

23.10.2017 | Case Report

Kocuria massiliensis sp. nov, a new bacterial species isolated from a patient with foot osteomyelitis

verfasst von: Sophie Edouard, Pierre-Edouard Fournier, Mamadou Beye, Frédérique Gouriet, Gregory Dubourg, Jeremy Delerce, Laure Swiader, Didier Raoult

Erschienen in: Infection | Ausgabe 2/2018

Einloggen, um Zugang zu erhalten

Abstract

Most of the species from the genus Kocuria are environmental or commensals of mammalian skin and oral bacteria, and had rarely been associated with human infection. However, recent reports showed an increase of the clinical role of these bacteria in human infectious diseases. Most of the cases occurred in hospitals and were device related. They included bacteremia, peritonitis, abscess, endocarditis and ocular infection. We here describe the main characteristics and the draft genome of Kocuria massiliensis sp. nov., strain P3598T (CSURP3598), a new Kocuria species that caused foot osteomyelitis in a 78-year-old woman. The improvement of diagnostic tools for the identification of bacteria in microbiological laboratories, including MALDI-TOF MS and 16S rRNA sequencing, largely contributed to the emergence and to the expansion of the clinical spectrum of infections caused by Kocuria spp. To the best of our knowledge, we report here the first case of osteomyelitis with a bacterial species from the genus Kocuria.
Literatur
1.
Zurück zum Zitat Seng P, Drancourt M, Gouriet F, La SB, Fournier PE, Rolain JM, et al. Ongoing revolution in bacteriology: routine identification of bacteria by matrix-assisted laser desorption ionization time-of-flight mass spectrometry. Clin Infect Dis. 2009;49:543–51.CrossRefPubMed Seng P, Drancourt M, Gouriet F, La SB, Fournier PE, Rolain JM, et al. Ongoing revolution in bacteriology: routine identification of bacteria by matrix-assisted laser desorption ionization time-of-flight mass spectrometry. Clin Infect Dis. 2009;49:543–51.CrossRefPubMed
2.
Zurück zum Zitat Drancourt M, Bollet C, Carlioz A, Martelin R, Gayral JP, Raoult D. 16S ribosomal DNA sequence analysis of a large collection of environmental and clinical unidentifiable bacterial isolates. J Clin Microbiol. 2000;38:3623–30.PubMedPubMedCentral Drancourt M, Bollet C, Carlioz A, Martelin R, Gayral JP, Raoult D. 16S ribosomal DNA sequence analysis of a large collection of environmental and clinical unidentifiable bacterial isolates. J Clin Microbiol. 2000;38:3623–30.PubMedPubMedCentral
3.
Zurück zum Zitat Stackebrandt E, Ebers J. Taxonomic parameters revisited: tarnished gold standards. Microbiol today. 2006;33:152. Stackebrandt E, Ebers J. Taxonomic parameters revisited: tarnished gold standards. Microbiol today. 2006;33:152.
4.
Zurück zum Zitat Kim M, Oh HS, Park SC, Chun J. Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes. Int J Syst Evol Microbiol. 2014;64:346–51.CrossRefPubMed Kim M, Oh HS, Park SC, Chun J. Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes. Int J Syst Evol Microbiol. 2014;64:346–51.CrossRefPubMed
5.
Zurück zum Zitat Domont F, le Fleche-Mateos A, Brémond-Gignac D, Hamdad F. Kocuria dacryocystitis infection, caused by Kocuria ocularis sp. nov. J Med Microbiol Case Rep. 2014;. doi:10.1099/jmmcr.0.002022. Domont F, le Fleche-Mateos A, Brémond-Gignac D, Hamdad F. Kocuria dacryocystitis infection, caused by Kocuria ocularis sp. nov. J Med Microbiol Case Rep. 2014;. doi:10.​1099/​jmmcr.​0.​002022.
6.
Zurück zum Zitat Stackebrandt E, Koch C, Gvozdiak O, Schumann P. Taxonomic dissection of the genus Micrococcus: Kocuria gen. nov., Nesterenkonia gen. nov., Kytococcus gen. nov., Dermacoccus gen. nov., and Micrococcus Cohn 1872 gen. emend. Int J Syst Bacteriol. 1995;45:682–92.CrossRefPubMed Stackebrandt E, Koch C, Gvozdiak O, Schumann P. Taxonomic dissection of the genus Micrococcus: Kocuria gen. nov., Nesterenkonia gen. nov., Kytococcus gen. nov., Dermacoccus gen. nov., and Micrococcus Cohn 1872 gen. emend. Int J Syst Bacteriol. 1995;45:682–92.CrossRefPubMed
7.
Zurück zum Zitat Purty S, Saranathan R, Prashanth K, Narayanan K, Asir J, Sheela DC, et al. The expanding spectrum of human infections caused by Kocuria species: a case report and literature review. Emerg Microbes Infect. 2013;2:e71.CrossRefPubMedPubMedCentral Purty S, Saranathan R, Prashanth K, Narayanan K, Asir J, Sheela DC, et al. The expanding spectrum of human infections caused by Kocuria species: a case report and literature review. Emerg Microbes Infect. 2013;2:e71.CrossRefPubMedPubMedCentral
8.
Zurück zum Zitat Savini V, Catavitello C, Masciarelli G, Astolfi D, Balbinot A, Bianco A, et al. Drug sensitivity and clinical impact of members of the genus Kocuria. J Med Microbiol. 2010;59:1395–402.CrossRefPubMed Savini V, Catavitello C, Masciarelli G, Astolfi D, Balbinot A, Bianco A, et al. Drug sensitivity and clinical impact of members of the genus Kocuria. J Med Microbiol. 2010;59:1395–402.CrossRefPubMed
9.
Zurück zum Zitat Sohn KM, Baek JY, Kim SH, Cheon S, Kim YS. Catheter-related bacteremia caused by Kocuria salsiccia: the first case. J Infect Chemother. 2015;21:305–7.CrossRefPubMed Sohn KM, Baek JY, Kim SH, Cheon S, Kim YS. Catheter-related bacteremia caused by Kocuria salsiccia: the first case. J Infect Chemother. 2015;21:305–7.CrossRefPubMed
10.
11.
Zurück zum Zitat Inada N, Shoji J, Yamagami S. Atopic keratoconjunctivitis complicated by Kocuria koreensis keratitis: the first case. Allergy Asthma Clin Immunol. 2017;13:6.CrossRefPubMedPubMedCentral Inada N, Shoji J, Yamagami S. Atopic keratoconjunctivitis complicated by Kocuria koreensis keratitis: the first case. Allergy Asthma Clin Immunol. 2017;13:6.CrossRefPubMedPubMedCentral
12.
Zurück zum Zitat Bhavsar SM, Hamula CL, Dingle TC. Report of two paediatric cases of central line infections caused by species of the genus Kocuria. JMM Case Rep. 2016;3:e005040.CrossRefPubMedPubMedCentral Bhavsar SM, Hamula CL, Dingle TC. Report of two paediatric cases of central line infections caused by species of the genus Kocuria. JMM Case Rep. 2016;3:e005040.CrossRefPubMedPubMedCentral
13.
Zurück zum Zitat Kandi V, Palange P, Vaish R, Bhatti AB, Kale V, Kandi MR, et al. Emerging Bacterial infection: identification and clinical significance of Kocuria sp. Cureus. 2016;8:e731.PubMedPubMedCentral Kandi V, Palange P, Vaish R, Bhatti AB, Kale V, Kandi MR, et al. Emerging Bacterial infection: identification and clinical significance of Kocuria sp. Cureus. 2016;8:e731.PubMedPubMedCentral
14.
Zurück zum Zitat Brandle G, L’Huillier AG, Wagner N, Gervaix A, Wildhaber BE, Lacroix L. First report of Kocuria marina spontaneous peritonitis in a child. BMC Infect Dis. 2014;14:719.CrossRefPubMedPubMedCentral Brandle G, L’Huillier AG, Wagner N, Gervaix A, Wildhaber BE, Lacroix L. First report of Kocuria marina spontaneous peritonitis in a child. BMC Infect Dis. 2014;14:719.CrossRefPubMedPubMedCentral
15.
Zurück zum Zitat Seng P, Abat C, Rolain JM, Colson P, Lagier JC, Gouriet F, et al. Identification of rare pathogenic bacteria in a clinical microbiology laboratory: impact of matrix-assisted laser desorption ionization-time of flight mass spectrometry. J Clin Microbiol. 2013;51:2182–94.CrossRefPubMedPubMedCentral Seng P, Abat C, Rolain JM, Colson P, Lagier JC, Gouriet F, et al. Identification of rare pathogenic bacteria in a clinical microbiology laboratory: impact of matrix-assisted laser desorption ionization-time of flight mass spectrometry. J Clin Microbiol. 2013;51:2182–94.CrossRefPubMedPubMedCentral
16.
Zurück zum Zitat Abdallah RA, Beye M, Diop A, Bakour S, Raoult D, Fournier PE. The impact of culturomics on taxonomy in clinical microbiology. Antonie Van Leeuwenhoek. 2017;110:1327–37.CrossRefPubMed Abdallah RA, Beye M, Diop A, Bakour S, Raoult D, Fournier PE. The impact of culturomics on taxonomy in clinical microbiology. Antonie Van Leeuwenhoek. 2017;110:1327–37.CrossRefPubMed
Metadaten
Titel
Kocuria massiliensis sp. nov, a new bacterial species isolated from a patient with foot osteomyelitis
verfasst von
Sophie Edouard
Pierre-Edouard Fournier
Mamadou Beye
Frédérique Gouriet
Gregory Dubourg
Jeremy Delerce
Laure Swiader
Didier Raoult
Publikationsdatum
23.10.2017
Verlag
Springer Berlin Heidelberg
Erschienen in
Infection / Ausgabe 2/2018
Print ISSN: 0300-8126
Elektronische ISSN: 1439-0973
DOI
https://doi.org/10.1007/s15010-017-1076-2

Weitere Artikel der Ausgabe 2/2018

Infection 2/2018 Zur Ausgabe

Leitlinien kompakt für die Innere Medizin

Mit medbee Pocketcards sicher entscheiden.

Seit 2022 gehört die medbee GmbH zum Springer Medizin Verlag

Update Innere Medizin

Bestellen Sie unseren Fach-Newsletter und bleiben Sie gut informiert.