Serum samples from participating veterans were analyzed.
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Levels of serum lncRNAs were analyzed for correlation to diabetes.
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ROC analysis was performed to determine GAS5 optimal cutoff.
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Individuals with absolute GAS5 < 10 ng/μl have almost 12 times higher odds of diabetes.
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We identified GAS5 lncRNA as significant indicator of diabetes.
Abstract
Background
Diabetes mellitus (DM), a metabolic disease, is characterized by impaired fasting glucose levels. Type 2 DM is adult onset diabetes. Long non-coding RNAs (lncRNAs) regulate gene expression and multiple studies have linked lncRNAs to human diseases.
Methods
Serum samples obtained from 96 participating veterans at JAH VA were deposited in the Research Biospecimen Repository. We used a two-stage strategy to identify an lncRNA whose levels correlated with T2DM. Initially we screened five serum samples from diabetic and non-diabetic individuals using lncRNA arrays. Next, GAS5 lncRNA levels were analyzed in 96 serum samples using quantitative PCR. Receiver operating characteristic (ROC) analysis was performed to determine the optimal cutoff GAS5 for diagnosis of DM.
Results
Our results demonstrate that decreased GAS5 levels in serum were associated with diabetes in a cohort of US military veterans. The ROC analysis revealed an optimal cutoff GAS5 value of less than or equal to 10. qPCR results indicated that individuals with absolute GAS5 < 10 ng/μl have almost twelve times higher odds of having diabetes (Exact Odds Ratio [OR] = 11.79 (95% CI: 3.97, 37.26), p < 0.001). Analysis indicated area under curve (AUC) of ROC of 0.81 with 85.1% sensitivity and 67.3% specificity in distinguishing non-diabetic from diabetic subjects. The positive predictive value is 71.4%.
Conclusion
lncRNA GAS5 levels are correlated to prevalence of T2DM.
General Significance
Assessment of GAS5 in serum along with other parameters offers greater accuracy in identifying individuals at-risk for diabetes.
