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Mitochondrial aspartyl-tRNA synthetase deficiency causes leukoencephalopathy with brain stem and spinal cord involvement and lactate elevation

Abstract

Leukoencephalopathy with brain stem and spinal cord involvement and lactate elevation (LBSL) has recently been defined based on a highly characteristic constellation of abnormalities observed by magnetic resonance imaging and spectroscopy1. LBSL is an autosomal recessive disease, most often manifesting in early childhood. Affected individuals develop slowly progressive cerebellar ataxia, spasticity and dorsal column dysfunction, sometimes with a mild cognitive deficit or decline. We performed linkage mapping with microsatellite markers in LBSL families and found a candidate region on chromosome 1, which we narrowed by means of shared haplotypes. Sequencing of genes in this candidate region uncovered mutations in DARS2, which encodes mitochondrial aspartyl-tRNA synthetase, in affected individuals from all 30 families. Enzyme activities of mutant proteins were decreased. We were surprised to find that activities of mitochondrial complexes from fibroblasts and lymphoblasts derived from affected individuals were normal, as determined by different assays.

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Figure 1: Characteristic MRI pattern of LBSL.
Figure 2: Localization of the gene involved in LBSL on chromosome 1.
Figure 3: Mitochondrial activity.

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References

  1. van der Knaap, M.S. et al. A new leukoencephalopathy with brainstem and spinal cord involvement and high lactate. Ann. Neurol. 53, 252–258 (2003).

    Article  Google Scholar 

  2. van der Knaap, M.S. & Valk, J. Magnetic Resonance of Myelination and Myelin Disorders (Springer Verlag, Berlin, 2005).

    Book  Google Scholar 

  3. Linnankivi, T. et al. Five new cases of a recently described leukoencephalopathy with high brain lactate. Neurology 63, 688–692 (2004).

    Article  CAS  Google Scholar 

  4. Serkov, S.V. et al. Five patients with a recently described novel leukoencephalopathy with brainstem and spinal cord involvement and elevated lactate. Neuropediatrics 35, 1–5 (2004).

    Article  CAS  Google Scholar 

  5. Petzold, G.C. et al. Adult onset leucoencephalopathy with brain stem and spinal cord involvement and normal lactate. J. Neurol. Neurosurg. Psychiatry 77, 889–891 (2006).

    Article  CAS  Google Scholar 

  6. Eiler, S., Dock-Bregeon, A., Moulinier, L., Thierry, J.C. & Moras, D. Synthesis of aspartyl-tRNA(Asp) in Escherichia coli–a snapshot of the second step. EMBO J. 18, 6532–6541 (1999).

    Article  CAS  Google Scholar 

  7. Smeitink, J.A. et al. Distinct clinical phenotypes associated with a mutation in the mitochondrial translation elongation factor EFTs. Am. J. Hum. Genet. 79, 869–877 (2006).

    Article  CAS  Google Scholar 

  8. Coenen, M.J. et al. Mutant mitochondrial elongation factor G1 and combined oxidative phosphorylation deficiency. N. Engl. J. Med. 351, 2080–2086 (2004).

    Article  CAS  Google Scholar 

  9. DiMauro, S. & Schon, E.A. Mitochondrial respiratory-chain diseases. N. Engl. J. Med. 348, 2656–2668 (2003).

    Article  CAS  Google Scholar 

  10. Schapira, A.H. Mitochondrial disease. Lancet 368, 70–82 (2006).

    Article  CAS  Google Scholar 

  11. Shoubridge, E.A. Nuclear genetic defects of oxidative phosphorylation. Hum. Mol. Genet. 10, 2277–2284 (2001).

    Article  CAS  Google Scholar 

  12. Dittmar, K.A., Goodenbour, J.M. & Pan, T. Tissue-specific differences in human transfer RNA expression. PLoS Genet. 2, e221 (2006).

    Article  Google Scholar 

  13. Park, S.G., Ewalt, K.L. & Kim, S. Functional expansion of aminoacyl-tRNA synthetases and their interacting factors: new perspectives on housekeepers. Trends Biochem. Sci. 30, 569–574 (2005).

    Article  CAS  Google Scholar 

  14. Bonnefond, L. et al. Toward the full set of human mitochondrial aminoacyl-tRNA synthetases: characterization of AspRS and TyrRS. Biochemistry 44, 4805–4816 (2005).

    Article  CAS  Google Scholar 

  15. Seneca, S. et al. A mitochondrial tRNA aspartate mutation causing isolated mitochondrial myopathy. Am. J. Med. Genet. A. 137, 170–175 (2005).

    Article  Google Scholar 

  16. Jordanova, A. et al. Disrupted function and axonal distribution of mutant tyrosyl-tRNA synthetase in dominant intermediate Charcot-Marie-Tooth neuropathy. Nat. Genet. 38, 197–202 (2006).

    Article  CAS  Google Scholar 

  17. Antonellis, A. et al. Glycyl tRNA synthetase mutations in Charcot-Marie-Tooth disease type 2D and distal spinal muscular atrophy type V. Am. J. Hum. Genet. 72, 1293–1299 (2003).

    Article  CAS  Google Scholar 

  18. Lee, J.W. et al. Editing-defective tRNA synthetase causes protein misfolding and neurodegeneration. Nature 443, 50–55 (2006).

    Article  CAS  Google Scholar 

  19. Antonellis, A. et al. Functional analyses of glycyl-tRNA synthetase mutations suggest a key role for tRNA-charging enzymes in peripheral axons. J. Neurosci. 26, 10397–10406 (2006).

    Article  CAS  Google Scholar 

  20. Jacobs, H.T. & Turnbull, D.M. Nuclear genes and mitochondrial translation: a new class of genetic disease. Trends Genet. 21, 312–314 (2005).

    Article  CAS  Google Scholar 

  21. 't Hart, L.M. et al. Evidence that the mitochondrial leucyl tRNA synthetase (LARS2) gene represents a novel type 2 diabetes susceptibility gene. Diabetes 54, 1892–1895 (2005).

    Article  CAS  Google Scholar 

  22. Leegwater, P.A. et al. The gene for leukoencephalopathy with vanishing white matter is located on chromosome 3q27. Am. J. Hum. Genet. 65, 728–734 (1999).

    Article  CAS  Google Scholar 

  23. Forshew, T. & Johnson, C.A. SCAMP: a spreadsheet to collate autozygosity mapping projects. J. Med. Genet. 41, e125 (2004).

    Article  CAS  Google Scholar 

  24. Gudbjartsson, D.F., Jonasson, K., Frigge, M.L. & Kong, A. Allegro, a new computer program for multipoint linkage analysis. Nat. Genet. 25, 12–13 (2000).

    Article  CAS  Google Scholar 

  25. van Kollenburg, B. et al. Glia-specific activation of all pathways of the unfolded protein response in vanishing white matter disease. J. Neuropathol. Exp. Neurol. 65, 707–715 (2006).

    Article  CAS  Google Scholar 

  26. Jacobs, E.H. et al. Active heroin administration induces specific genomic responses in the nucleus accumbens shell. FASEB J. 16, 1961–1963 (2002).

    Article  CAS  Google Scholar 

  27. Scholte, H.R. et al. Assessment of deficiencies of fatty acyl-CoA dehydrogenases in fibroblasts, muscle and liver. J. Inherit. Metab. Dis. 15, 347–352 (1992).

    Article  CAS  Google Scholar 

  28. Smet, J., Devreese, B., van Beeumen, J. & van Coster, R. Nondenaturing polyacrylamide gel electrophoresis as a method for studying protein interactions: applications in the analysis of mitochondrial OXPHOS complexes. in Cell Biology: a Laboratory Handbook (ed. Celis, J.) 259–264 (Academic, San Diego, 2005).

    Google Scholar 

  29. Van Coster, R. et al. Blue native polyacrylamide gel electrophoresis: a powerful tool in diagnosis of oxidative phosphorylation defects. Pediatr. Res. 50, 658–665 (2001).

    Article  CAS  Google Scholar 

  30. de Paepe, B. et al. Diagnostic value of immunostaining in cultured skin fibroblasts from patients with oxidative phosphorylation defects. Pediatr. Res. 59, 2–6 (2006).

    Article  CAS  Google Scholar 

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Acknowledgements

We thank P. Heutink for helpful discussions. We thank J. Powers for critical reading of the manuscript. We thank K. de Groot and T. Vriesman for technical assistance. We are grateful for the generous collaboration of many colleagues and most of all for the contributions from LBSL patients and their families. This study was supported by ZonMW (TOP grant 9120.6002), the Optimix Foundation for Scientific Research and the Centre for Medical Systems Biology (CMSB), a center of excellence approved by the Netherlands Genomics Initiative/Netherlands Organisation for Scientific Research (NWO).

Author information

Authors and Affiliations

Authors

Contributions

G.C.S. supervised the genetic study and cloned and purified the wild-type and mutant proteins. T.v.d.K. performed the genome-wide scan. R.J.v.A. and C.G.M.v.B. performed sequence analysis. M.S. and C.F. were involved in the synthetase assay. J.S. and R.V.C. contributed to the measurement of the mitochondrial activities in cultured cells. T.I.M., S.V.S., G.U., M.B., R.S., I.K.-M., J.A.M.S., R.V.C. and M.S.v.d.K. all contributed key patients to the study. J.A.M.S. measured mitochondrial activities on a muscle biopsy of the first patient. J.C.P. contributed to the analysis of the genome-wide scan. M.S.v.d.K. originally described the disease, selected the patients on the basis of MRI criteria and supervised the study. G.C.S. and M.S.v.d.K. designed the study and wrote the paper with contributions from many of the other coauthors.

Corresponding author

Correspondence to Gert C Scheper.

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The authors declare no competing financial interests.

Supplementary information

Supplementary Fig. 1

Conservation of altered amino acids in mtAspRS. (PDF 22 kb)

Supplementary Fig. 2

Splicing variants of exon 3. (PDF 49 kb)

Supplementary Fig. 3

Expression of COXI in fibroblasts. (PDF 22 kb)

Supplementary Table 1

MRI criteria for LBSL. (PDF 7 kb)

Supplementary Table 2

Activities of the repiratory chain complexes. (PDF 8 kb)

Supplementary Table 3

mtAspRS mRNA expression. (PDF 17 kb)

Supplementary Table 4

Primers. (PDF 22 kb)

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Scheper, G., van der Klok, T., van Andel, R. et al. Mitochondrial aspartyl-tRNA synthetase deficiency causes leukoencephalopathy with brain stem and spinal cord involvement and lactate elevation. Nat Genet 39, 534–539 (2007). https://doi.org/10.1038/ng2013

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