Peptide nucleic acid fluorescence in situ hybridization for rapid detection of Klebsiella pneumoniae from positive blood cultures

References

1. Bascomb S., Lapage S. P., Willcox W. R., Curtis M. A. 1971; Numerical classification of the tribe Klebsielleae. J Gen Microbiol 66:279–295 [CrossRef]
   [Google Scholar]
2. Boye K., Hansen D. S. 2003; Sequencing of 16S rDNA of Klebsiella : taxonomic relations within the genus and to other Enterobacteriaceae . Int J Med Microbiol 292:495–503 [CrossRef]
   [Google Scholar]
3. Brisse S., Verhoef J. 2001; Phylogenetic diversity of Klebsiella pneumoniae and Klebsiella oxytoca clinical isolates revealed by randomly amplified polymorphic DNA, gyrA and parC genes sequencing and automated ribotyping. Int J Syst Evol Microbiol 51:915–924 [CrossRef]
   [Google Scholar]
4. Brisse S., van Himbergen T., Kusters K., Verhoef J. 2004; Development of a rapid identification method for Klebsiella pneumoniae phylogenetic groups and analysis of 420 clinical isolates. Clin Microbiol Infect 10:942–945 [CrossRef]
   [Google Scholar]
5. Feldman C., Smith C., Levy H., Ginsburg P., Miller S. D., Koornhof H. J. 1990; Klebsiella pneumoniae bacteraemia at an urban general hospital. J Infect 20:21–31 [CrossRef]
   [Google Scholar]
6. Hansen D. S., Gottschau A., Kolmos H. J. 1998; Epidemiology of Klebsiella bacteraemia: a case control study using Escherichia coli bacteraemia as control. J Hosp Infect 38:119–132 [CrossRef]
   [Google Scholar]
7. Hansen D. S., Aucken H. M., Abiola T., Podschun R. 2004; Recommended test panel for differentiation of Klebsiella species on the basis of a trilateral interlaboratory evaluation of 18 biochemical tests. J Clin Microbiol 42:3665–3669 [CrossRef]
   [Google Scholar]
8. Kempf V. A., Trebesius K., Autenrieth I. B. 2000; Fluorescent in situ hybridization allows rapid identification of microorganisms in blood cultures. J Clin Microbiol 38:830–838
   [Google Scholar]
9. Laupland K. B., Davies H. D., Church D. L., Louie T. J., Dool J. S., Zygun D. A., Doig C. J. 2004; Bloodstream infection-associated sepsis and septic shock in critically ill adults: a population-based study. Infection 32:59–64 [CrossRef]
   [Google Scholar]
10. Liu Y., Mee B. J., Mulgrave L. 1997; Identification of clinical isolates of indole-positive Klebsiella spp., including Klebsiella planticola , and a genetic and molecular analysis of their β -lactamases. J Clin Microbiol 35:2365–2369
    [Google Scholar]
11. Ludwig W., Rossello-Mora R., Aznar R., Klugbauer S., Spring S., Reetz K., Beimfohr C., Brockmann E., Kirchhof G. other authors 1995; Comparative sequence analysis of 23S rRNA from proteobacteria. Syst Appl Microbiol 18:164–188 [CrossRef]
    [Google Scholar]
12. Oliveira K., Procop G. W., Wilson D., Coull J., Stender H. 2002; Rapid identification of Staphylococcus aureus directly from blood cultures by fluorescence in situ hybridization with peptide nucleic acid probes. J Clin Microbiol 40:247–251 [CrossRef]
    [Google Scholar]
13. Panceri M. L., Vegni F. E., Goglio A., Manisco A., Tambini R., Lizioli A., Porretta A. D., Privitera G. 2004; Aetiology and prognosis of bacteraemia in Italy. Epidemiol Infect 132:647–654 [CrossRef]
    [Google Scholar]
14. Pedersen G., Schønheyder H. C., Sørensen H. T. 2003; Source of infection and other factors associated with case fatality in community-acquired bacteremia – a Danish population-based cohort study from 1992 to 1997. Clin Microbiol Infect 9:793–802 [CrossRef]
    [Google Scholar]
15. Podschun R., Pietsch S., Holler C., Ullmann U. 2001; Incidence of Klebsiella species in surface waters and their expression of virulence factors. Appl Environ Microbiol 67:3325–3327 [CrossRef]
    [Google Scholar]
16. Rigby S., Procop G. W., Haase G., Wilson D., Hall G., Kurtzman C., Oliveira K., Von Oy S., Hyldig-Nielsen J. J. other authors 2002; Fluorescence in situ hybridization with peptide nucleic acid probes for rapid identification of Candida albicans directly from blood culture bottles. J Clin Microbiol 40:2182–2186 [CrossRef]
    [Google Scholar]
17. Rosenblueth M., Martinez L., Silva J., Martinez-Romero E. 2004; Klebsiella variicola , a novel species with clinical and plant-associated isolates. Syst Appl Microbiol 27:27–35 [CrossRef]
    [Google Scholar]
18. Søgaard M., Stender H., Schønheyder H. C. 2005; Direct identification of major blood culture pathogens, including Pseudomonas aeruginosa and Escherichia coli , by a panel of fluorescence in situ hybridization assays using peptide nucleic acid probes. J Clin Microbiol 43:1947–1949 [CrossRef]
    [Google Scholar]
19. Westbrook G. L., O'Hara C. M., Roman S. B., Miller J. M. 2000; Incidence and identification of Klebsiella planticola in clinical isolates with emphasis on newborns. J Clin Microbiol 38:1495–1497
    [Google Scholar]
20. Wilks S. A., Keevil C. W. 2006; Targeting sequence-specific low-affinity 16S rRNA binding sites by using peptide nucleic acids for detection of legionellae in biofilms. Appl Environ Microbiol 72:5453–5462 [CrossRef]
    [Google Scholar]