Background
Results and discussion
Design the Real-time PCR array
Expression profile analysis of pediatric AML and normal control samples
Age | Sex | Hb | WBC | RBC | PLt | Diagnosis | Chromosome | Fusion gene | |
---|---|---|---|---|---|---|---|---|---|
1 | 7 | M | 80 | 455. 8 | 2. 88 | 15 | AML- M1 | 46,XY | HOX11 |
2 | 4 | F | 83 | 136. 1 | 3. 09 | 11 | AML- M1 | 46,XY | ns |
3 | 5 | F | 73 | 38. 83 | 2. 25 | 14 | AML- M5b | 46,XY,t ( 1, 11) ( q21; q23) | ns |
4 | 9 | M | 45 | 2. 47 | 1. 49 | 10 | AML- M3 | 46, XY,t ( 11; 21) , t ( 15; 17) [ 12] / 46, XY, [ 3] | PML/ RARA |
5 | 0.9 | F | 76 | 56. 95 | 3. 52 | 155 | AML- M4b | ns | MLL/ AF19 |
6 | 3 | M | 82 | 19. 58 | 2. 68 | 11 | AML- M7 | 46,XY,t ( 2; 16)(q37; q12) , t ( 12, 20) ( p13, q11) | ns |
7 | 0.9 | F | 73 | 323. 54 | 2. 74 | 33 | AML- M4b | ns | ns |
8 | 4 | M | 80 | 7. 97 | 2. 3 | 91 | AML- M5 | ns | AML/ ETO |
9 | 11 | M | 80 | 35. 3 | 2. 45 | 75 | AML- M3a | 46, XY | PML/ RAR1 |
10 | 6 | M | 68 | 39. 4 | 2. 39 | 18 | AML- M3 | 46,XY | PML/ RARA |
11 | 7 | F | 54 | 4. 56 | 1. 75 | 17 | AML- M3 | 46,XX,t ( 15; 17) ( q22; q21) [ 3] / 46,XX[ 12] | PML/ RARA |
Gene | Description | NBM | AML | Fold change | P | |
---|---|---|---|---|---|---|
1 | BI RC5 | Baculoviral IAP repeat containing 5,survivin | 34. 0496 | 221. 4575 | 6. 504 | <0. 0001 |
2 | FASLG | Fas ligand (TNF superfamily, member 6) | 0. 0005 | 0. 0308 | 57. 068 | <0. 0001 |
3 | WT1 | Wilms tumor 1 | 3. 7431 | 14. 5000 | 3. 874 | <0. 0001 |
4 | AREG | Amphiregulin | 0. 9960 | 4. 6307 | 4. 649 | <0. 0001 |
5 | BCL2L1 | BCL2-like 1 | 7. 6435 | 27. 1093 | 3. 547 | 0. 0002 |
6 | HDAC4 | Histone deacetylase 4 | 0. 0924 | 1. 0273 | 11. 117 | 0. 0002 |
7 | CXCR4 | Chemokine (C-X-C motif) receptor 4 | 24. 1547 | 1029. 2052 | 42. 609 | 0. 0004 |
8 | HDAC7 | Histone deacetylase 7 | 0. 7191 | 11. 6169 | 16. 155 | 0. 0006 |
9 | S100A9 | S100 calcium binding protein A9 | 0. 4583 | 185. 0090 | 403. 722 | 0. 0007 |
10 | CD44 | CD44 molecule (Indian blood group) | 2. 1648 | 312. 4866 | 144. 349 | 0. 0007 |
11 | S100A8 | S100 calcium binding protein A8 | 0. 0027 | 79. 0206 | 29736. 015 | 0. 0007 |
12 | STMN2 | Stathmin-like 2 | 0. 1887 | 1. 2260 | 6. 497 | 0. 0007 |
13 | NF1 | Neurofibromin 1 | 0. 0553 | 0. 3749 | 6. 775 | 0. 0009 |
14 | CASP4 | Caspase 4 | 0. 1491 | 218. 1356 | 1463. 137 | 0. 0009 |
15 | BCL- 2 | B-cell CLL/lymphoma 2 | 6. 1230 | 60. 3025 | 9. 849 | 0. 0009 |
16 | BI K | BCL2-interacting killer (apoptosis-inducing) | 3. 3040 | 26. 2063 | 7. 932 | 0. 001 |
17 | PTEN | Phosphatase and tensin homolog | 0. 5800 | 1. 4595 | 2. 516 | 0. 001 |
18 | CASP1 | Caspase 1 | 0. 3028 | 79. 9140 | 263. 884 | 0. 004 |
19 | CCL 5 | Chemokine (C-C motif) ligand 5 | 0. 0288 | 872. 0606 | 30237. 515 | 0. 004 |
Gene | Description | NBM | AML | Fold Change | P | |
---|---|---|---|---|---|---|
1 | HOXB9 | Homeobox B9 | 172. 9526 | 0. 6802 | 0. 004 | <0. 0001 |
2 | HOXA5 | Homeobox A5 | 925. 5920 | 3. 4967 | 0. 004 | <0. 0001 |
3 | I D3 | I nhi bi t or of DNA bi ndi ng 3 | 531. 6130 | 3. 0212 | 0. 006 | <0. 0001 |
4 | I GF2 | Insulin-like growth factor 2 | 3. 4683 | 0. 0056 | 0. 002 | <0. 0001 |
5 | I D4 | I nhi bi t or of DNA bi ndi ng 4 | 1422. 5193 | 0. 1906 | 0. 000 | <0. 0001 |
6 | FOXC1 | Forkhead box C1 | 3676. 7938 | 26. 5854 | 0. 007 | <0. 0001 |
7 | HOXA7 | Homeobox A7 | 15. 3933 | 0. 2396 | 0. 016 | <0. 0001 |
8 | CXCL1 | Chemokine (C-X-C motif) ligand 1 | 0. 1130 | 0. 0022 | 0. 020 | <0. 0001 |
9 | HOXC9 | Homeobox C9 | 138. 5471 | 4. 6762 | 0. 034 | <0. 0001 |
10 | HOXA3 | Homeobox A3 | 16. 0470 | 0. 5843 | 0. 036 | <0. 0001 |
11 | HOXA4 | Homeobox A4 | 263. 9704 | 7. 3403 | 0. 028 | <0. 0001 |
12 | DKK3 | Dickkopf 3 homolog | 8. 4810 | 0. 3344 | 0. 039 | <0. 0001 |
13 | JUN | Jun pr ot o- oncogene | 1005. 8731 | 35. 1804 | 0. 035 | <0. 0001 |
14 | STAT4 | Signal transducer and activator of transcription 4 | 11. 5854 | 0. 5332 | 0. 046 | <0. 0001 |
15 | HOXB1 | Homeobox B1 | 23. 4942 | 0. 8037 | 0. 034 | <0. 0001 |
16 | FGFR1 | Fibroblast growth factor receptor 1 | 3. 7172 | 0. 2184 | 0. 059 | <0. 0001 |
17 | FOXM1 | For khead box M1 | 789. 1920 | 177. 9791 | 0. 226 | 0. 0008 |
18 | HDAC2 | Histone deacetylase 2 | 2925. 0236 | 618. 9588 | 0. 212 | 0. 0008 |
19 | HMBS | Hydr oxymet hyl bi l ane synt hase | 233. 0075 | 46. 3417 | 0. 199 | 0. 0008 |
20 | I D1 | I nhi bi t or of DNA bi ndi ng 1 | 140. 4811 | 14. 8120 | 0. 105 | 0. 0008 |
21 | I D2 | I nhi bi t or of DNA bi ndi ng 2 | 1221. 3259 | 360. 7765 | 0. 295 | 0. 001 |
22 | CDKN2B | Cyclin-dependent kinase inhibitor 2B | 23. 9879 | 5. 1419 | 0. 214 | 0. 001 |
23 | DDX1 | DEAD ( Asp- Gl u- Al a- Asp) box hel i case 1 | 2039. 8291 | 681. 2089 | 0. 334 | 0. 001 |
24 | HDAC1 | Histone deacetylase 1 | 1196. 1914 | 449. 9266 | 0. 376 | 0. 002 |
25 | BRCA1 | Br east cancer 1, ear l y onset | 12. 8548 | 4. 4127 | 0. 343 | 0. 004 |