Background
Methods
Study subjects
Data collection
Selection of SNPs
Genotyping
Statistical methods
Results
Characteristics of study subjects
Variables | Case (%) | Control (%) | P value | OR (95% CI) |
---|---|---|---|---|
(n = 1166) | (n = 1179) | |||
Age (yrs.) mean ± SD | 58.28 ± 11.28 | 59.19 ± 10.78 | 0.149 | |
< 50 | 223(19.1) | 264(22.4) | 1 | |
51–69 | 739(63.4) | 716(60.7) | 1.222 (0.995–1.501) | |
≥ 70 | 204(17.5) | 199(16.9) | 1.214 (0.932–1.581) | |
Income(yuan/month) | ||||
≤ 3500 | 797 (67.6) | 836 (71.7) | 0.031 | 1 |
> 3500 | 382 (32.4) | 330 (28.3) | 0.824 (0.690–0.982) | |
Gender | 0.542 | |||
Male | 842 (72.2) | 838 (71.1) | 1 | |
Female | 324 (27.8) | 341 (28.9) | 0.946 (0.790–1.132) | |
Education | < 0.001 | |||
Illiteracy | 185(15.9) | 133(11.3) | 1 | |
Middle school and below | 686(58.8) | 647(54.9) | 0.762 (0.595–0.976) | |
High school and above | 295(25.3) | 399(33.8) | 0.532 (0.406–0.696) | |
Marital status | 0.15 | |||
Married | 1099(94.3) | 1094(92.8) | 1 | |
Single | 67(5.7) | 85(7.2) | 0.785(0.564–1.092) | |
Occupation | < 0.001 | |||
Worker | 266(22.8) | 297(25.2) | 1 | |
Farmer | 333(28.6) | 245(20.8) | 1.518 (1.201–1.917) | |
Enterprises and employees | 321(27.5) | 433(36.7) | 0.828 (0.665–1.031) | |
Cook | 18(1.5) | 9(0.8) | 2.233 (0.986–5.055) | |
Others | 228(19.6) | 195(16.5) | 1.305 (1.014–1.681) | |
Family history of lung cancer | 0.004 | |||
No | 942(80.8) | 1005(85.2) | 1 | |
Yes | 224(19.2) | 174(14.6) | 1.373(1.105–1.706) | |
History of lung diseases | < 0.001 | |||
No | 1009(86.5) | 1080(91.6) | 1 | |
Yes | 157(13.5) | 99(8.4) | 1.697(1.301–2.214) | |
BMI (kg/m2) | < 0.001 | |||
18.5–23.9 | 720(61.9) | 638(54.5) | 1 | |
< 18.5 | 133(11.4) | 51(4.4) | 2.311(1.645–3.246) | |
≥ 24 | 311(26.7) | 481(41.1) | 0.573(0.479–0.685) | |
Tea | 0.729 | |||
No | 578(49.6) | 576(48.9) | 1 | |
Yes | 588(50.4) | 603(51.1) | 0.972(0.826–1.143) | |
Alcohol | 0.353 | |||
No | 884(75.8) | 913(77.4) | 1 | |
Yes | 282(24.2) | 266(22.6) | 1.095(0.904–1.326) | |
Smoking | < 0.001 | |||
No | 427(36.6) | 691(58.6) | 1 | |
Yes | 739(63.4) | 488(41.4) | 2.451(2.075–2.894) | |
ETS | < 0.001 | |||
No | 348(29.8) | 647(54.9) | 1 | |
Yes | 818(70.2) | 532(45.1) | 2.859(2.412–3.388) | |
Histology | ||||
Adenocarcinoma | 551(47.3) | |||
Squamous cell carcinoma | 324(27.8) | |||
Others | 290(24.9) |
SNP effects on lung cancer risk
Locus | Case (n = 1166) | Control (n = 1179) | Unadjusted OR | Adjusted OR* | P
trend
value |
---|---|---|---|---|---|
95% CI | 95% CI | ||||
rs6564851(PHWE = 0.57) | 1097 | 1102 | 0.729 | ||
GG | 743 (67.7%) | 724 (65.7%) | 1 | 1 | |
GT | 310 (28.3%) | 342 (31.0%) | 0.883 (0.734–1.062) | 0.922 (0.754–1.128) | |
TT | 44 (4.0%) | 36 (3.3%) | 1.191 (0.758–1.872) | 1.311 (0.805–2.134) | |
GT + TT | 354 (32.3%) | 378 (34.3%) | 0.913 (0.764–1.090) | 0.959 (0.791–1.163) | |
rs12934922(PHWE = 0.88) | 1121 | 1146 | 0.672 | ||
AA | 839 (74.8%) | 861 (75.1%) | 1 | 1 | |
AT | 261 (23.3%) | 264 (23.0%) | 1.015 (0.834–1.234) | 0.955 (0.772–1.182) | |
TT | 21 (1.9%) | 21 (1.8%) | 1.026 (0.556–1.893) | 0.813 (0.424–1.561) | |
AT+TT | 282 (25.2%) | 285 (24.8%) | 1.015 (0.840–1.228) | 0.944 (0.768–1.160) | |
rs7501331(PHWE = 0.09) | 1060 | 1084 | 0.117 | ||
CC | 707 (66.7%) | 696 (64.2%) | 1 | 1 | |
CT | 308 (29.1%) | 334 (30.8%) | 0.908 (0.753–1.094) | 0.862 (0.704–1.056) | |
TT | 45 (4.2%) | 54 (5.0%) | 0.820 (0.545–1.235) | 0.829 (0.531–1.294) | |
CT + TT | 353 (33.3%) | 388 (35.8%) | 0.896 (0.749–1.070) | 0.858 (0.707–1.041) |
Dietary patterns analysis
Baseline characteristics of all subjects by quartile (Q) of factor score
Associations of dietary pattern and lung cancer risk
Dietary pattern | Controls | Adenocarcinoma | Squamous cell carcinoma | Others | All | ||||
---|---|---|---|---|---|---|---|---|---|
N | adjusted OR*(95% CI) | N | adjusted OR*(95% CI) | N | adjusted OR*(95% CI) | N | adjusted OR*(95% CI) | ||
High quality protein | |||||||||
Q1(low) | 294 | 126 | 1 | 74 | 1 | 77 | 1 | 277 | 1 |
Q2 | 296 | 130 | 1.119 (0.824–1.520) | 85 | 1.250 (0.856–1.824) | 75 | 1.068 (0.735–1.552) | 290 | 1.141 (0.891–1.460) |
Q3 | 295 | 142 | 1.196 (0.883–1.618) | 88 | 1.341 (0.920–1.954) | 62 | 0.906 (0.615–1.336) | 292 | 1.134 (0.885–1.452) |
Q4(high) | 294 | 153 | 1.400 (0.999–1.890) | 77 | 1.254 (0.853–1.845) | 76 | 1.192 (0.820–1.734) | 306 | 1.283 (0.999–1.643) |
P for trend | 0.170 | 0.406 | 0.785 | 0.063 | |||||
Fruits and vegetables | |||||||||
Q1(low) | 294 | 283 | 1 | 160 | 1 | 160 | 1 | 603 | 1 |
Q2 | 295 | 121 | 0.439 (0.332–0.581) | 79 | 0.513 (0.365–0.720) | 61 | 0.398 (0.280–0.565) | 261 | 0.447 (0.354–0.566) |
Q3 | 296 | 85 | 0.282 (0.208–0.384) | 51 | 0.330 (0.225–0.484) | 40 | 0.247 (0.166–0.369) | 176 | 0.285 (0.221–0.368) |
Q4(high) | 294 | 62 | 0.213 (0.152–0.298) | 34 | 0.235 (0.152–0.363) | 29 | 0.188 (0.120–0.295) | 125 | 0.216 (0.164–0.284) |
P for trend | < 0.001 | < 0.001 | < 0.001 | < 0.001 | |||||
Cereals/wheat and meat | |||||||||
Q1(low) | 294 | 117 | 1 | 92 | 1 | 84 | 1 | 293 | 1 |
Q2 | 295 | 146 | 1.149 (0.847–1.561) | 93 | 0.848 (0.592–1.215) | 78 | 0.820 (0.569–1.182) | 317 | 0.973 (0.759–1.246) |
Q3 | 296 | 127 | 0.920 (0.673–1.257) | 83 | 0.816 (0.565–1.179) | 70 | 0.744 (0.512–1.081) | 280 | 0.846 (0.658–1.086) |
Q4(high) | 294 | 164 | 1.179 (0.871–1.597) | 56 | 0.534 (0.358–0.796) | 58 | 0.588 (0.397–0.872) | 278 | 0.831 (0.645–1.070) |
P for trend | 0.342 | 0.012 | 0.021 | 0.230 | |||||
Frugal pattern | |||||||||
Q1(low) | 294 | 126 | 1 | 75 | 1 | 63 | 1 | 264 | 1 |
Q2 | 296 | 117 | 0.857 (0.627–1.171) | 72 | 0.841 (0.569–1.243) | 66 | 0.951 (0.638–1.417) | 255 | 0.873 (0.675–1.129) |
Q3 | 295 | 118 | 0.827 (0.605–1.131) | 81 | 0.894 (0.610–1.311) | 73 | 1.022 (0.690–1.514) | 272 | 0.897 (0.695–1.159) |
Q4(high) | 294 | 190 | 1.337 (0.998–1.790) | 96 | 1.029 (0.710–1.491) | 88 | 1.216 (0.831–1.779) | 374 | 1.235(0.966–1.581) |
P for trend | 0.050 | 0.791 | 0.267 | 0.073 |
Stratified associations by smoking status
Dietary pattern | Never smokers | Smokers | ||
---|---|---|---|---|
Cases/controls | Adjusted OR*(95% CI) | Cases/controls | Adjusted OR*(95% CI) | |
High quality protein | ||||
Q1(low) | 104/172 | 1 | 173/122 | 1 |
Q2 | 102/177 | 1.085 (0.753–1.563) | 189/119 | 1.226 (0.865–1.737) |
Q3 | 108/169 | 1.244 (0.864–1.790) | 184/126 | 1.151 (0.813–1.631) |
Q4(high) | 113/173 | 1.397 (0.972–2.008) | 193/121 | 1.310 (0.924–1.857) |
P for trend | 0.053 | 0.187 | ||
Fruits and vegetables | ||||
Q1(low) | 239/154 | 1 | 364/140 | 1 |
Q2 | 88/165 | 0.365 (0.258–0.517) | 173/130 | 0.529 (0.383–0.730) |
Q3 | 53/184 | 0.180 (0.121–0.266) | 123/112 | 0.410 (0.289–0.580) |
Q4(high) | 47/188 | 0.159 (0.106–0.239) | 79/106 | 0.270 (0.184–0.395) |
P for trend | < 0.001 | < 0.001 | ||
Cereals/wheat and meat | ||||
Q1(low) | 85/189 | 1 | 208/105 | 1 |
Q2 | 82/167 | 1.136 (0.774–1.666) | 229/128 | 0.827 (0.588–1.164) |
Q3 | 120/168 | 1.351 (0.935–1.951) | 161/128 | 0.556 (0.392–0.794) |
Q4(high) | 137/167 | 1.517 (1.053–2.184) | 141/127 | 0.463 (0.322–0.666) |
P for trend | 0.016 | < 0.001 | ||
Frugal pattern | ||||
Q1(low) | 117/163 | 1 | 147/131 | 1 |
Q2 | 94/176 | 0.661 (0.458–0.956) | 161/120 | 1.142 (0.799–1.633) |
Q3 | 90/177 | 0.620(0.428–0.898) | 182/118 | 1.278 (0.895–1.824) |
Q4(high) | 126/175 | 0.865 (0.607–1.232) | 249/119 | 1.713 (1.215–2.416) |
P for trend | 0.436 | 0.002 |
Stratified associations by BCMO1 loci
Dietary patterns | Cases/controls | Adjusted OR (95% CI) | Cases/controls | Adjusted OR (95% CI) | P for interaction |
---|---|---|---|---|---|
rs6564851:GG | rs6564851:GT + TT | ||||
High quality protein | P
trend
= 0.655 | P
trend
= 0.001 | 0.019 | ||
Q1(low) | 186/169 | 1.00(ref) | 80/111 | 1.00(ref) | |
Q2 | 195/180 | 1.112 (0.807–1.531) | 76/99 | 1.186 (0.758–1.855) | |
Q3 | 176/184 | 0.999 (0.722–1.381) | 97/82 | 1.869 (1.200–2.910) | |
Q4(high) | 186/191 | 1.120 (0.811–1.547) | 98/86 | 1.870 (1.206–2.900) | |
Fruits and vegetables | P
trend
< 0.001 | P
trend
< 0.001 | 0.792 | ||
Q1(low) | 386/186 | 1.00(ref) | 181/91 | 1.00(ref) | |
Q2 | 162/182 | 0.413 (0.304–0.559) | 82/94 | 0.511 (0.339–0.770) | |
Q3 | 114/176 | 0.300 (0.216–0.416) | 53/99 | 0.280 (0.179–0.437) | |
Q4(high) | 81/180 | 0.217 (0.153–0.309) | 38/94 | 0.227 (0.140–0.367) | |
Cereals and meat | P
trend
= 0.036 | P
trend
= 0.541 | 0.1 | ||
Q1(low) | 188/165 | 1.00(ref) | 89/119 | 1.00(ref) | |
Q2 | 203/191 | 0.857 (0.622–1.181) | 91/85 | 1.230 (0.797–1.899) | |
Q3 | 170/185 | 0.726 (0.523–1.008) | 92/89 | 1.163 (0.757–1.787) | |
Q4(high) | 182/183 | 0.729 (0.525–1.012) | 82/85 | 1.163 (0.748–1.809) | |
Frugal pattern | P
trend
= 0.028 | P
trend
= 0.445 | 0.371 | ||
Q1(low) | 165/192 | 1.00(ref) | 83/86 | 1.00(ref) | |
Q2 | 173/183 | 1.016 (0.734–1.408) | 59/95 | 0.569 (0.354–0.915) | |
Q3 | 174/176 | 1.053 (0.759–1.461) | 85/93 | 0.785 (0.499–1.234) | |
Q4(high) | 231/173 | 1.423 (1.036–1.956) | 127/104 | 1.034 (0.672–1.592) | |
rs12934922:AA | rs12934922:AT+TT | ||||
High quality protein | P
trend
= 0.065 | P
trend
= 0.119 | 0.69 | ||
Q1(low) | 203/213 | 1.00(ref) | 65/79 | 1.00(ref) | |
Q2 | 209/221 | 1.132 (0.844–1.519) | 72/64 | 1.400 (0.838–2.339) | |
Q3 | 203/214 | 1.180 (0.877–1.588) | 78/67 | 1.610 (0.965–2.686) | |
Q4(high) | 224/213 | 1.321 (0.984–1.773) | 67/75 | 1.470 (0.878–2.463) | |
Fruits and vegetables | P
trend
< 0.001 | P
trend
< 0.001 | 0.447 | ||
Q1(low) | 426/214 | 1.00(ref) | 156/73 | 1.00(ref) | |
Q2 | 185/227 | 0.430 (0.326–0.567) | 59/65 | 0.432 (0.266–0.701) | |
Q3 | 135/210 | 0.309 (0.229–0.416) | 38/74 | 0.263 (0.156–0.443) | |
Q4(high) | 93/210 | 0.224 (0.162–0.309) | 29/73 | 0.216 (0.124–0.376) | |
Cereals and meat | P
trend
= 0.701 | P
trend
= 0.035 | 0.129 | ||
Q1(low) | 206/216 | 1.00(ref) | 77/74 | 1.00(ref) | |
Q2 | 217/226 | 0.903 (0.674–1.210) | 82/59 | 1.275 (0.767–2.118) | |
Q3 | 200/212 | 0.864 (0.641–1.164) | 68/77 | 0.836 (0.510–1.370) | |
Q4(high) | 216/207 | 0.953 (0.707–1.283) | 55/75 | 0.624 (0.369–1.053) | |
Frugal pattern | P
trend
= 0.079 | P
trend
= 0.725 | 0.619 | ||
Q1(low) | 179/217 | 1.00(ref) | 72/66 | 1.00(ref) | |
Q2 | 191/223 | 0.933 (0.689–1.263) | 55/69 | 0.701 (0.412–1.193) | |
Q3 | 1194/207 | 0.938 (0.691–1.273) | 71/77 | 0.821 (0.492–1.368) | |
Q4(high) | 275/214 | 1.287 (0.960–1.727) | 84/73 | 1.031 (0.627–1.695) | |
rs7501331:CC | rs7501331:CT + TT | ||||
High quality protein | P
trend
= 0.097 | P
trend
= 0.134 | 0.902 | ||
Q1(low) | 180/181 | 1.00(ref) | 77/89 | 1.00(ref) | |
Q2 | 172/177 | 1.139 (0.826–1.571) | 92/101 | 1.189 (0.751–1.883) | |
Q3 | 182/168 | 1.323 (0.957–1.827) | 81/95 | 1.089 (0.678–1.748) | |
Q4(high) | 173/170 | 1.269 (0.917–1.756) | 103/103 | 1.483 (0.934–2.354) | |
Fruits and vegetables | P
trend
< 0.001 | P
trend
< 0.001 | 0.487 | ||
Q1(low) | 359/173 | 1.00(ref) | 191/101 | 1.00(ref) | |
Q2 | 160/175 | 0.464 (0.341–0.630) | 65/99 | 0.372 (0.241–0.574) | |
Q3 | 115/182 | 0.291 (0.210–0.402) | 51/86 | 0.332 (0.209–0.528) | |
Q4(high) | 73/166 | 0.212 (0.147–0.305) | 46/102 | 0.274 (0.172–0.435) | |
Cereals and meat | P
trend
= 0.110 | P
trend
= 0.948 | 0.44 | ||
Q1(low) | 169/177 | 1.00(ref) | 100/102 | 1.00(ref) | |
Q2 | 202/179 | 1.083 (0.786–1.494) | 77/89 | 0.778 (0.493–1.229) | |
Q3 | 176/166 | 1.005 (0.725–1.395) | 84/104 | 0.694 (0.443–1.088) | |
Q4(high) | 160/174 | 0.769 (0.550–1.074) | 92/93 | 1.032 (0.662–1.610) | |
Frugal pattern | P
trend
= 0.014 | P
trend
= 0.727 | 0.253 | ||
Q1(low) | 150/180 | 1.00(ref) | 88/92 | 1.00(ref) | |
Q2 | 153/175 | 0.979 (0.700–1.370) | 76/100 | 0.709 (0.446–1.127) | |
Q3 | 180/170 | 1.172 (0.842–1.630) | 71/95 | 0.651 (0.405–1.048) | |
Q4(high) | 224/171 | 1.433 (1.036–1.982) | 118/101 | 1.055 (0.682–1.632) |