Published February 11, 2016 | Version v1
Report Open

BioMedBridges: Harmonisation of semantic standards supporting use cases from WP7 and WP10, report

Creators

  • 1. EMBL-European Bioinformatics Institute
  • 2. Science and Technology Facilities Council
  • 3. Helmholtz Zentrum Muenchen
  • 4. TMF e.V.
  • 5. The Netherlands Cancer Institute

Description

BioMedBridges has performed ontology standardization for three use cases for Imaging Datasets, mouse datasets, and species neutral sample datasets from the BioSamples database hosted at EBI. We have developed an ontology access standard (MIAO) and deployed tooling for mapping annotations to ontologies in support of data integration activities. The results are available in public databases such as the EBI RDF platform and improve data queries and integration for the user community.

Files

D3_4_Harmonisation_of_semantic_standards_supporting_use_cases_from_WP7_and_WP10.pdf

Files (514.0 kB)

Additional details

Funding

BIOMEDBRIDGES – Building data bridges between biological and medical infrastructures in Europe 284209
European Commission