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Archives of Virology

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28.06.2016 | Brief Report

Phylogenetic tracking of current porcine epidemic diarrhea virus (PEDV) strains in the Philippines

verfasst von: Rubigilda Paraguison-Alili, Clarissa Yvonne J. Domingo

Erschienen in: Archives of Virology | Ausgabe 9/2016

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Abstract

To trace the possible route of introduction of porcine epidemic diarrhea virus (PEDV), the phylogenetic relationships of PEDV strains in the regions of epidemicity in the Philippines to PEDV strains that are endemic in other countries were investigated. Partial nucleotide sequences of the S1 spike gene was determined from the PEDV-positive samples and compared with S1 sequences from other countries. Phylogenetic analysis indicated that PEDV strains in the Philippines segregate into two groups. Members of group 1 are related to strains from the USA, Taiwan, Japan and Canada, while those in group 2 are related to strains from China and Vietnam.

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Titel: Phylogenetic tracking of current porcine epidemic diarrhea virus (PEDV) strains in the Philippines
verfasst von: Rubigilda Paraguison-Alili
Clarissa Yvonne J. Domingo
Publikationsdatum: 28.06.2016
Verlag: Springer Vienna
Erschienen in: Archives of Virology / Ausgabe 9/2016
Print ISSN: 0304-8608
Elektronische ISSN: 1432-8798
DOI: https://doi.org/10.1007/s00705-016-2938-0

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Phylogenetic tracking of current porcine epidemic diarrhea virus (PEDV) strains in the Philippines

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