Skip to main content
Erschienen in: International Journal of Legal Medicine 3/2019

21.07.2018 | Population Data

Population genetic analysis of 23 Y-STR loci in Central Argentine Patagonia

verfasst von: María L. Parolin, Camila Tamburrini, Luciano E. Real, Néstor G. Basso

Erschienen in: International Journal of Legal Medicine | Ausgabe 3/2019

Einloggen, um Zugang zu erhalten

Abstract

We analyzed 23 Y-STR haplotypes of 139 unrelated males from Central Argentine Patagonia. A total of 133 different haplotypes (127 singletons) were observed. Haplotype diversity was similar to that previously observed in other Argentine populations and matching probability showed a strong dependence on the sample size. AMOVA carried out with full haplotypes showed significant differences between different regions of the country. The multi-dimensional scaling plot showed Chubut sample in an intermediate position among Europe and other Patagonian populations. These results will contribute to increase the Y-chromosome haplotype reference database and constitute a useful tool for anthropological and forensic researches.
Anhänge
Nur mit Berechtigung zugänglich
Literatur
1.
Zurück zum Zitat Avena S, Via M, Ziv E, Pérez-Stable E, Gignoux C, Dejean C, Huntsman S, Torres-Mejía G, Dutil J, Matta J (2012) Heterogeneity in genetic admixture across different regions of Argentina. PLoS One 7(4):e34695CrossRef Avena S, Via M, Ziv E, Pérez-Stable E, Gignoux C, Dejean C, Huntsman S, Torres-Mejía G, Dutil J, Matta J (2012) Heterogeneity in genetic admixture across different regions of Argentina. PLoS One 7(4):e34695CrossRef
2.
Zurück zum Zitat Parolin M, Zanetti D, Calò C, Esteban E, Avena S, Carnese F, Moral P (2017) Migrations, admixture and genetic diversity in Central Argentinian Patagonia: analysis of autosomal Alu polymorphisms. J Basic Appl Genet 28:29–42 Parolin M, Zanetti D, Calò C, Esteban E, Avena S, Carnese F, Moral P (2017) Migrations, admixture and genetic diversity in Central Argentinian Patagonia: analysis of autosomal Alu polymorphisms. J Basic Appl Genet 28:29–42
3.
Zurück zum Zitat Avena S, Parolin M, Boquet M, Dejean C, Postillone M, Alvarez Trentini Y, Di Fabio Rocca F, Mansilla F, Jones L, Dugoujon J (2010) Mezcla génica y linajes uniparentales en Esquel (Pcia. de Chubut): Su comparación con otras muestras poblacionales argentinas. J Basic Appl Genet 21:1–14 Avena S, Parolin M, Boquet M, Dejean C, Postillone M, Alvarez Trentini Y, Di Fabio Rocca F, Mansilla F, Jones L, Dugoujon J (2010) Mezcla génica y linajes uniparentales en Esquel (Pcia. de Chubut): Su comparación con otras muestras poblacionales argentinas. J Basic Appl Genet 21:1–14
4.
Zurück zum Zitat Avena S, Parolin M, Dejean C, Ríos Part M, Fabrikant G, Goicoechea A, Dugoujon J, Carnese F (2009) Mezcla génica y linajes uniparentales en Comodoro Rivadavia (provincia de Chubut, Argentina). Rev Arg Antrop Biol 11:25–41 Avena S, Parolin M, Dejean C, Ríos Part M, Fabrikant G, Goicoechea A, Dugoujon J, Carnese F (2009) Mezcla génica y linajes uniparentales en Comodoro Rivadavia (provincia de Chubut, Argentina). Rev Arg Antrop Biol 11:25–41
5.
Zurück zum Zitat Parolin M, Avena S, Fleischer S, Pretell M, Di Fabio Rocca F, Rodríguez D, Dejean C, Postillone M, Vaccaro M, Dahinten S (2013) Análisis de la diversidad biológica y mestizaje en la ciudad de Puerto Madryn (Prov. de Chubut, Argentina). Rev Arg Antrop. Biol 15:61–75 Parolin M, Avena S, Fleischer S, Pretell M, Di Fabio Rocca F, Rodríguez D, Dejean C, Postillone M, Vaccaro M, Dahinten S (2013) Análisis de la diversidad biológica y mestizaje en la ciudad de Puerto Madryn (Prov. de Chubut, Argentina). Rev Arg Antrop. Biol 15:61–75
6.
Zurück zum Zitat Tamburrini C (2016) Mestizaje, migraciones y cultura: Diversidad genética y linajes uniparentales en la localidad de Trelew (Prov. de Chubut). Universidad Nacional de la Patagonia, Puerto Madryn Tamburrini C (2016) Mestizaje, migraciones y cultura: Diversidad genética y linajes uniparentales en la localidad de Trelew (Prov. de Chubut). Universidad Nacional de la Patagonia, Puerto Madryn
7.
Zurück zum Zitat Jurado Medina L, Parolin M, Ramallo V, Sepúlveda P, Real L, Avena S, Carnese F, Basso N, Baillet G (2015) En busca de la herencia americana en poblaciones mestizas. Análisis comparativo entre muestras masculinas de Patagonia, Noroeste y Cuyo. XII Jornadas Nacionales de Antropología Biológica. Corrientes, Argentina, Abstract Book 82 Jurado Medina L, Parolin M, Ramallo V, Sepúlveda P, Real L, Avena S, Carnese F, Basso N, Baillet G (2015) En busca de la herencia americana en poblaciones mestizas. Análisis comparativo entre muestras masculinas de Patagonia, Noroeste y Cuyo. XII Jornadas Nacionales de Antropología Biológica. Corrientes, Argentina, Abstract Book 82
8.
Zurück zum Zitat Bandieri S (2011) Historia de la Patagonia, 2nd edn. Sudamericana, Buenos Aires Bandieri S (2011) Historia de la Patagonia, 2nd edn. Sudamericana, Buenos Aires
9.
Zurück zum Zitat Purps J, Siegert S, Willuweit S, Nagy M, Alves C, Salazar R, Angustia S, Santos L, Anslinger K, Bayer B (2014) A global analysis of Y-chromosomal haplotype diversity for 23 STR loci. Forensic Sci Int Genet 12:12–23CrossRef Purps J, Siegert S, Willuweit S, Nagy M, Alves C, Salazar R, Angustia S, Santos L, Anslinger K, Bayer B (2014) A global analysis of Y-chromosomal haplotype diversity for 23 STR loci. Forensic Sci Int Genet 12:12–23CrossRef
10.
Zurück zum Zitat Toscanini U, Vullo C, Berardi G, Llull C, Borosky A, Gómez A, Pardo-Seco J, Salas A (2016) A comprehensive Y-STR portrait of Argentinean populations. Forensic Sci Int Genet 20:1–5CrossRef Toscanini U, Vullo C, Berardi G, Llull C, Borosky A, Gómez A, Pardo-Seco J, Salas A (2016) A comprehensive Y-STR portrait of Argentinean populations. Forensic Sci Int Genet 20:1–5CrossRef
11.
Zurück zum Zitat Willuweit S, Roewer L (2015) The new Y chromosome haplotype reference database. Forensic Sci Int Genet 15:43–48CrossRef Willuweit S, Roewer L (2015) The new Y chromosome haplotype reference database. Forensic Sci Int Genet 15:43–48CrossRef
12.
Zurück zum Zitat Excoffier L, Lischer H (2010) Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Mol Ecol Resour 10:564–567CrossRef Excoffier L, Lischer H (2010) Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Mol Ecol Resour 10:564–567CrossRef
13.
Zurück zum Zitat Lê S, Josse J, Husson F (2008) FactoMineR: an R package for multivariate analysis. J Stat Softw 25:1–18CrossRef Lê S, Josse J, Husson F (2008) FactoMineR: an R package for multivariate analysis. J Stat Softw 25:1–18CrossRef
14.
Zurück zum Zitat Parolin M, Avena S, Dejean C, Jaureguiberry S, Sambuco L, Carnese F (2012) Y-chromosomal STR haplotype diversity in a sample from the Metropolitan Area of Buenos Aires (Argentina). Rev Mus Antropol 5:53–64 Parolin M, Avena S, Dejean C, Jaureguiberry S, Sambuco L, Carnese F (2012) Y-chromosomal STR haplotype diversity in a sample from the Metropolitan Area of Buenos Aires (Argentina). Rev Mus Antropol 5:53–64
15.
Zurück zum Zitat Carracedo A, Butler J, Gusmão L, Linacre A, Parson W, Roewer L, Schneider P (2014) Update of the guidelines for the publication of genetic population data. Forensic Sci Int Genet 10:A1–A2CrossRef Carracedo A, Butler J, Gusmão L, Linacre A, Parson W, Roewer L, Schneider P (2014) Update of the guidelines for the publication of genetic population data. Forensic Sci Int Genet 10:A1–A2CrossRef
16.
Zurück zum Zitat Parson W, Roewer L (2010) Publication of population data of linearly inherited DNA markers in the International Journal of Legal Medicine. Int J Legal Med 124:505–509CrossRef Parson W, Roewer L (2010) Publication of population data of linearly inherited DNA markers in the International Journal of Legal Medicine. Int J Legal Med 124:505–509CrossRef
Metadaten
Titel
Population genetic analysis of 23 Y-STR loci in Central Argentine Patagonia
verfasst von
María L. Parolin
Camila Tamburrini
Luciano E. Real
Néstor G. Basso
Publikationsdatum
21.07.2018
Verlag
Springer Berlin Heidelberg
Erschienen in
International Journal of Legal Medicine / Ausgabe 3/2019
Print ISSN: 0937-9827
Elektronische ISSN: 1437-1596
DOI
https://doi.org/10.1007/s00414-018-1896-3

Weitere Artikel der Ausgabe 3/2019

International Journal of Legal Medicine 3/2019 Zur Ausgabe

Neu im Fachgebiet Rechtsmedizin