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Erschienen in: European Journal of Clinical Microbiology & Infectious Diseases 7/2020

03.03.2020 | Original Article

Propionibacterium/Cutibacterium species–related positive samples, identification, clinical and resistance features: a 10-year survey in a French hospital

verfasst von: M. Broly, L. Ruffier d’Epenoux, A Guillouzouic, G. Le Gargasson, M-E Juvin, A.G. Leroy, P. Bémer, S. Corvec

Erschienen in: European Journal of Clinical Microbiology & Infectious Diseases | Ausgabe 7/2020

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Abstract

A 10-year retrospective study of Propionibacterium/Cutibacterium-positive samples gathered from hospitalized patients was conducted at Nantes University hospital. A total of 2728 Propionibacterium/Cutibacterium-positive samples analyzed between 2007 and 2016 were included. Due to the implementation of MALDI-TOF identification in 2013, most non-Cutibacterium acnes isolates were identified a second time using this technology. Over that period, Cutibacterium acnes remained the most predominant species accounting for 91.5% (2497/2728) of the isolates, followed by Cutibacterium avidum (4.2%, 115/2728) and Cutibacterium granulosum (2.4%, 64/2728). Regarding the origin of samples, the orthopaedic department was the main Cutibacterium sample provider representing 51.9% (1415/2728) of all samples followed by the dermatology department (11.5%, 315/2728). Samples were recovered from various tissue locations: 31.5% (858/2728) from surgery-related samples such as shoulder, spine or hip replacement devices and 19.1% (520/2728) from skin samples. MALDI-TOF method revealed misidentification before 2013. Cutibacterium avidum was falsely identified as C. granulosum (n = 33). Consequently, MALDI-TOF technology using up-to-date databases should be preferred to biochemical identification in order to avoid biased species identification. Regarding antibiotic resistance, 14.7% (20/136) of C. acnes was resistant to erythromycin. 4.1% (41/1005) of C. acnes strains, 17.9% (12/67) of C. avidum strains and 3.6% (1/28) of C. granulosum strains were found resistant to clindamycin.
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Literatur
1.
Zurück zum Zitat Scholz CFP, Kilian M (2016) The natural history of cutaneous propionibacteria, and reclassification of selected species within the genus Propionibacterium to the proposed novel genera Acidipropionibacterium gen. nov., Cutibacterium gen. nov. and Pseudopropionibacterium gen. nov. Int J Syst Evol Microbiol 1(66):4422–4432. https://doi.org/10.1099/ijsem.0.001367 CrossRef Scholz CFP, Kilian M (2016) The natural history of cutaneous propionibacteria, and reclassification of selected species within the genus Propionibacterium to the proposed novel genera Acidipropionibacterium gen. nov., Cutibacterium gen. nov. and Pseudopropionibacterium gen. nov. Int J Syst Evol Microbiol 1(66):4422–4432. https://​doi.​org/​10.​1099/​ijsem.​0.​001367 CrossRef
2.
Zurück zum Zitat Dekio I, Gharbia SE, Klenk H-P, Hattori M, Culak R, Ohkuma M et al (2015) Dissecting the taxonomic heterogeneity within Propionibacterium acnes: proposal for Propionibacterium acnes subsp. acnes subsp. nov. and Propionibacterium acnes subsp. elongatum subsp. nov. Int J Syst Evol Microbiol 1(65):4776–4787. https://doi.org/10.1099/ijsem.0.000648 CrossRef Dekio I, Gharbia SE, Klenk H-P, Hattori M, Culak R, Ohkuma M et al (2015) Dissecting the taxonomic heterogeneity within Propionibacterium acnes: proposal for Propionibacterium acnes subsp. acnes subsp. nov. and Propionibacterium acnes subsp. elongatum subsp. nov. Int J Syst Evol Microbiol 1(65):4776–4787. https://​doi.​org/​10.​1099/​ijsem.​0.​000648 CrossRef
3.
Zurück zum Zitat McDowell A, Barnard E, Liu J, Li H, Patrick S (2016) Proposal to reclassify Propionibacterium acnes type I as Propionibacterium acnes subsp. acnes subsp. nov. and Propionibacterium acnes type II as Propionibacterium acnes subsp. defendens subsp. nov. Int J Syst Evol Microbiol 1(66):5358–5365. https://doi.org/10.1099/ijsem.0.001521 CrossRef McDowell A, Barnard E, Liu J, Li H, Patrick S (2016) Proposal to reclassify Propionibacterium acnes type I as Propionibacterium acnes subsp. acnes subsp. nov. and Propionibacterium acnes type II as Propionibacterium acnes subsp. defendens subsp. nov. Int J Syst Evol Microbiol 1(66):5358–5365. https://​doi.​org/​10.​1099/​ijsem.​0.​001521 CrossRef
4.
Zurück zum Zitat Corvec S (2018) Clinical and biological features of Cutibacterium (formerly Propionibacterium) avidum, an underrecognized microorganism. Clin Microbiol Rev 1:31. http://cmr.asm.org/content/31/3/e00064-17.abstract. https://doi.org/10.1128/CMR.00064-17 Corvec S (2018) Clinical and biological features of Cutibacterium (formerly Propionibacterium) avidum, an underrecognized microorganism. Clin Microbiol Rev 1:31. http://​cmr.​asm.​org/​content/​31/​3/​e00064-17.​abstract.​ https://​doi.​org/​10.​1128/​CMR.​00064-17
10.
Zurück zum Zitat Aubin GG, Kambarev S, Bémer P, Lawson PA, Corvec S (2016) Draft genome sequence of highly rifampin-resistant Propionibacterium namnetense NTS 31307302 T isolated from a patient with a bone infection. Genome Announc 25:4. http://genomea.asm.org/lookup. https://doi.org/10.1128/genomeA.00819-16 CrossRef Aubin GG, Kambarev S, Bémer P, Lawson PA, Corvec S (2016) Draft genome sequence of highly rifampin-resistant Propionibacterium namnetense NTS 31307302 T isolated from a patient with a bone infection. Genome Announc 25:4. http://​genomea.​asm.​org/​lookup.​ https://​doi.​org/​10.​1128/​genomeA.​00819-16 CrossRef
12.
Zurück zum Zitat Portillo ME, Corvec S, Borens O, Trampuz A (2013) Propionibacterium acnes: an underestimated pathogen in implant-associated infections. Biomed Res Int 2013. doi: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3838805/. https://doi.org/10.1155/2013/804391 Portillo ME, Corvec S, Borens O, Trampuz A (2013) Propionibacterium acnes: an underestimated pathogen in implant-associated infections. Biomed Res Int 2013. doi: https://​www.​ncbi.​nlm.​nih.​gov/​pmc/​articles/​PMC3838805/​.​ https://​doi.​org/​10.​1155/​2013/​804391
23.
Zurück zum Zitat Weinstein MP, Clinical and Laboratory Standards Institute. Performance standards for antimicrobial susceptibility testing 2019 Weinstein MP, Clinical and Laboratory Standards Institute. Performance standards for antimicrobial susceptibility testing 2019
25.
Zurück zum Zitat Frenard C, Dagnelie M-A, Khammari A, Saint-Jean M, Boisrobert A, Corvec S et al (2018) Do Cutibacterium acnes and Staphylococcus aureus define two different types of folliculitis? Bacteriological study of scalp folliculitis. J Eur Acad Dermatol Venereol 32:e266–e268. https://doi.org/10.1111/jdv.14793 CrossRefPubMed Frenard C, Dagnelie M-A, Khammari A, Saint-Jean M, Boisrobert A, Corvec S et al (2018) Do Cutibacterium acnes and Staphylococcus aureus define two different types of folliculitis? Bacteriological study of scalp folliculitis. J Eur Acad Dermatol Venereol 32:e266–e268. https://​doi.​org/​10.​1111/​jdv.​14793 CrossRefPubMed
26.
Zurück zum Zitat Rentenaar RJ, Kusen SM, Riemens-van Zetten GMA, van Mourik MSM (2017) Detection of clinical Cutibacterium acnes isolates in different Becton Dickinson blood culture vials. J Clin Microbiol 26:–56. doi: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5744230/. https://doi.org/10.1128/JCM.01486-17 Rentenaar RJ, Kusen SM, Riemens-van Zetten GMA, van Mourik MSM (2017) Detection of clinical Cutibacterium acnes isolates in different Becton Dickinson blood culture vials. J Clin Microbiol 26:–56. doi: https://​www.​ncbi.​nlm.​nih.​gov/​pmc/​articles/​PMC5744230/​.​ https://​doi.​org/​10.​1128/​JCM.​01486-17
27.
Zurück zum Zitat Bemer P, Plouzeau C, Tande D, Leger J, Giraudeau B, Valentin AS et al (2014) Evaluation of 16S rRNA gene PCR sensitivity and specificity for diagnosis of prosthetic joint infection: a prospective multicenter cross-sectional study. J Clin Microbiol 1(52):3583–3589. https://doi.org/10.1128/JCM.01459-14 CrossRef Bemer P, Plouzeau C, Tande D, Leger J, Giraudeau B, Valentin AS et al (2014) Evaluation of 16S rRNA gene PCR sensitivity and specificity for diagnosis of prosthetic joint infection: a prospective multicenter cross-sectional study. J Clin Microbiol 1(52):3583–3589. https://​doi.​org/​10.​1128/​JCM.​01459-14 CrossRef
28.
Zurück zum Zitat Corvec S, Dellière S, Guillouzouic A, Aubin GG (2017) Can 16S rRNA PCR be the solution for a rapid detection of Propionibacterium acnes in surgical shoulder or spine samples? Comments on “A rapid method for detecting Propionibacterium acnes in surgical biopsy specimens from the shoulder”. J Shoulder Elb Surg 26:e203–e204. https://doi.org/10.1016/j.jse.2017.02.027 CrossRef Corvec S, Dellière S, Guillouzouic A, Aubin GG (2017) Can 16S rRNA PCR be the solution for a rapid detection of Propionibacterium acnes in surgical shoulder or spine samples? Comments on “A rapid method for detecting Propionibacterium acnes in surgical biopsy specimens from the shoulder”. J Shoulder Elb Surg 26:e203–e204. https://​doi.​org/​10.​1016/​j.​jse.​2017.​02.​027 CrossRef
29.
Zurück zum Zitat Corvec S, Luchetta J, Aubin GG (2015) Is hemolysis a clinical marker of Propionibacterium acnes orthopedic infection or a phylogenetic marker? Am J Orthop:E61–E62 Corvec S, Luchetta J, Aubin GG (2015) Is hemolysis a clinical marker of Propionibacterium acnes orthopedic infection or a phylogenetic marker? Am J Orthop:E61–E62
33.
Zurück zum Zitat Arshad N, Bémer P, Le Gargasson G, Guillouzouic A, Corvec S. Identification incorrecte par MALDI-TOF VitekMS de Cutibacterium namnetense à Cutibacterium acnes parmi des isolats cliniques : utilité du séquençage gyrB et nouveau pathogène osseux ? 2017;39ème Réunion Interdisciplinaire de Chimiothérapie Anti-Infectieuse:P156. doi: https://doi.org/10.1016/j.medmal.2018.04.233 Arshad N, Bémer P, Le Gargasson G, Guillouzouic A, Corvec S. Identification incorrecte par MALDI-TOF VitekMS de Cutibacterium namnetense à Cutibacterium acnes parmi des isolats cliniques : utilité du séquençage gyrB et nouveau pathogène osseux ? 2017;39ème Réunion Interdisciplinaire de Chimiothérapie Anti-Infectieuse:P156. doi: https://​doi.​org/​10.​1016/​j.​medmal.​2018.​04.​233
45.
Zurück zum Zitat Leyden JJ, McGinley KJ, Cavalieri S, Webster GF, Mills OH, Kligman AM (1983) Propionibacterium acnes resistance to antibiotics in acne patients. J Am Acad Dermatol 8:41–45CrossRef Leyden JJ, McGinley KJ, Cavalieri S, Webster GF, Mills OH, Kligman AM (1983) Propionibacterium acnes resistance to antibiotics in acne patients. J Am Acad Dermatol 8:41–45CrossRef
Metadaten
Titel
Propionibacterium/Cutibacterium species–related positive samples, identification, clinical and resistance features: a 10-year survey in a French hospital
verfasst von
M. Broly
L. Ruffier d’Epenoux
A Guillouzouic
G. Le Gargasson
M-E Juvin
A.G. Leroy
P. Bémer
S. Corvec
Publikationsdatum
03.03.2020
Verlag
Springer Berlin Heidelberg
Erschienen in
European Journal of Clinical Microbiology & Infectious Diseases / Ausgabe 7/2020
Print ISSN: 0934-9723
Elektronische ISSN: 1435-4373
DOI
https://doi.org/10.1007/s10096-020-03852-5

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