Background
The Ras-family of guanosine triphosphatases (GTPases) regulates multiple cell processes, including cellular proliferation, differentiation, and actin-cytoskeletal organization. Altered expression or activation of
Ras oncogenes has been found in ~30% of human cancers [
1,
2]. Acting as a molecular switch, Ras cycles between an inactive GDP-bound state and an active GTP-bound conformation. In its active form, Ras initiates mitogenic signals through various pathways, including the well-studied Raf-MEK-ERK1/2, PI3K/Akt, and RalGDS cascades (reviewed in [
3]).
Two members of the Ras superfamily of small GTPases, namely Rac1 and Cdc42, were first investigated in Swiss-3T3 mouse fibroblasts and found to be regulators of the actin cytoskeleton [
4‐
6]. In these reports, it was shown that Rac1 controlled lamellipodia and ruffling behavior, whereas Cdc42 affected the extension of filipodia. In addition to their role as cytoskeletal regulators, these small GTPases contribute to the regulation of several signal transduction proteins, including p21-activated kinase (PAK), p38/stress-activated protein kinases (SAPK), c-jun
N-terminal kinases (JNK), nuclear factor κB (NFκB), and serum-responsive factor (SRF) [
7].
The activities of Rac1 and Cdc42 are required for transformation of NIH3T3 mouse fibroblasts and Rat1 fibroblasts by expression of oncogenic Ras [
8,
9]. In most studies, constitutively-active (V12) mutants, or dominant-negative (N17) mutants of Rac1 and/or Cdc42 have been used to elucidate the respective unique roles each protein plays in oncogene transformation. For example, in NIH3T3 mouse fibroblasts, as well as Rat1 fibroblasts, Rac1
V12 expression confers growth factor independence, whereas Cdc42
V12 expression confers anchorage independent growth [
8]. However, in Swiss-3T3 mouse fibroblasts, expression of either constitutively active protein results in growth factor independent proliferation [
10]. This indicates that Rac1 and Cdc42 may have distinct roles in transformation depending on the cell line and/or species from which the cells are derived. However, in all three rodent fibroblast cell lines previously evaluated, it has been shown that expression of activated Rac1 or Cdc42 potentiated the ability for these cells to form sarcomas following their subcutaneous injection into athymic mice [
8‐
10]. Although it is clear that Rac1 and Cdc42 play a role in HRas
V12-induced transformation of rodent fibroblasts, HRas
V12-induced transformation of human fibroblasts has been considered to be mechanistically distinct [
11].
The present study was designed to determine whether the activity of Rac1, or Cdc42, or both, is required for HRasV12-induced transformation of human fibroblasts. Moreover, we sought to identify Rac1-mediated and/or Cdc42-mediated gene expression differences in the context of oncogenic HRas signalling. Our data confirm that activation of both Rac1 and Cdc42 is required for such HRasV12-induced transformation. In addition, using a genomic array approach, we identified 29 genes whose expression in HRasV12-transformed cells is regulated by Rac1 and/or Cdc42. Many of these genes, e.g. vascular endothelial growth factor (VEGF) and urokinase plasminogen activator (uPA), have been shown to play a significant role in cancer.
Methods
Cell strains and culture conditions
Unless otherwise indicated, the growth medium for the human foreskin-derived fibroblasts, i.e. MSU-1.1 and PH3MT strains and their derivatives, was Eagle's minimal essential medium supplemented with 0.2 mM L-aspartic acid, 0.2 mM L-serine, 1.0 mM sodium pyruvate, and 10% supplemented calf serum (SCS) (Hyclone Laboratories, Logan, UT). Penicillin, 100 units/ml, and streptomycin, 100 μg/ml were also included. All cell lines were cultured at 37°C in a humidified incubator containing 5% CO2, 95% ambient air.
To determine the genetic changes required for malignant transformation of human fibroblasts, McCormick, Maher, and their colleagues developed the MSU-1 lineage of human fibroblasts, beginning with finite life span skin fibroblasts derived from the foreskin of a normal neonate [
12]. The parental cell strain in that lineage (designated MSU-1.1) is a chromosomally-stable, near-diploid, telomerase-positive, infinite life span cell strain that has been shown to be capable of being transformed into malignant cells by transfection of numerous oncogenes including HRas, NRas and KRas [
13‐
17]. For example, MSU-1.1 cells transfected with an over-expressed oncogenic T24 HRas protein containing an activating V12 mutation (HRas
V12) formed sarcomas when injected subcutaneously into athymic mice [
15]. The malignant cell line, designated PH3MT, derived from such a tumor was used in the present study.
Construction of human cell strains expressing dominant-negative mutant genes under the control of tetracycline
The pTet-tTAk and pTet-splice vectors were purchased from Invitrogen (Carlsbad, CA). This Tet-off system allows tetracycline-regulated expression of genes in mammalian cells. To facilitate selection, a pTet-tTAk vector expressing a gene coding for histidinol resistance was constructed and designated pTet-tTakHisR. A pTet-splice vector containing a gene coding for puromycin resistance was also constructed and designated pTetPuroR. We derived the Flag-Cdc42N17 and myc-Rac1N17 mutant cDNAs by PCR amplification using PFU polymerase (Stratagene, La Jolla, CA), and separately subcloned each into the pTetPuroR vector. The cDNA templates used for PCR amplification of Cdc42N17 and Rac1N17 were kindly provided respectively by Dr. K. Gallo (Michigan State University) and Dr. G. Bokoch (Scripps Institute, La Jolla, CA). We verified the integrity of the resulting pTet-Flag-Cdc42N17 and pTet-myc-Rac1N17 vector constructs by automated DNA sequencing (Visible Genetics, Bayer, Toronto, ON, Canada). Lipofectamine (Invitrogen, Carlsbad, CA) was used to transfect the plasmids into human cells per manufacturers protocol.
PH3MT cells were transfected with the pTet-tTakHisR vector, selected using histidinol (1 mM) (Sigma, St. Louis, MO), and designated PH3MT-tTak-C1. Such cells were subsequently transfected with the empty vector pTetPuroR, or with the pTetPuroR vector containing myc-Rac1N17 cDNA, or with the pTetPuroR vector containing FLAG-Cdc42N17 cDNA, and selected for resistance to puromycin (0.5 μg/ml) (Sigma, St. Louis, MO). A puromycin resistant strain resulting from transfection of the empty pTet-tTAk vector was also prepared and was designated PH3MT-VC-C2. Two independent clones that exhibited tetracycline-regulated expression of myc-Rac1N17 were chosen for study and designated PH3MT-Rac1N17 (-C1 or -C2). Two independent clones with regulatable FLAG-Cdc42N17 expression were similarly selected and designated PH3MT-Cdc42N17 (-C1, and C2). A sixth cell strain, designated PH3MT-Rac1N17/Cdc42N17, expressing both myc-Rac1N17 and FLAG-Cdc42N17 dominant-negative proteins was also isolated.
Construction of cell strains expressing constitutively-activated mutants
To generate MSU-1.1 cell strains expressing GFP-Rac1V12 or GFP-Cdc42V12 fusion proteins, the GFP nucleotide sequence from the pCRUZ-GFP vector (Santa Cruz Biotechnology, Santa Cruz, CA) was isolated and ligated into the pcDNA6-V5-HisA vector (Invitrogen, Carlsbad, CA), which confers blasticidin resistance. Rac1V12 and Cdc42V12 cDNA template sequences were purchased from University of Missouri-Rolla Research Center (UMR) (Rolla, MO), PCR-amplified, and ligated downstream of the GFP nucleotide sequence to enable the transfectants to express N-terminally-labelled proteins. The resulting constructs were transfected into the parental, non-transformed MSU-1.1 cell strain, and selected for resistance to blasticidin (1 μg/ml) (Invitrogen, Carlsbad, CA) and screened for expression of the GFP-fusion protein by fluorescence microscopy. Identified clones were isolated, expanded, and screened by Western blotting for GFP-tagged Rac1V12 or Cdc42V12 protein expression.
Cell lysates and Western blot analysis
Whole cell protein extracts were prepared using a lysis buffer consisting of 50 mM Tris-HCl, pH 7.2, 150 mM NaCl, 50 mM NaF, 0.5% NP-40, 1 mM Na3V04, 200 mM benzamidine, 1 mM PMSF, 25 μg/ml aprotinin, and 25 μg/ml leupeptin. Total protein concentration was quantified using the Coomassie protein assay reagent (Pierce Biotechnology, Rockford, IL). Lysates were denatured in 5× Laemelli sample buffer, separated by either 10% or 12% SDS-PAGE, and transferred to PVDF membrane. The membrane was blocked for 2 hr with Tris-buffered saline containing 0.1% Tween-20 (TBST) and 5% (w/v) non-fat milk. For the majority of the studies, the membrane was probed overnight with the primary antibody at 4°C, then probed for 1 hr at room temperature with the appropriate horseradish peroxidase-linked secondary antibody (Sigma and Santa Cruz Biotechnology). Both antibodies were diluted in TBST containing 5% milk. The membrane was incubated with the Supersignal West Pico chemiluminescent horseradish peroxidase substrate (Pierce Biotechnology, Rockford, IL) and then exposed to film. The primary antibodies used were anti-FLAG, 1:1000 dilution (Sigma, St. Louis, MO), anti-myc 9E10, 1:500 dilution, and anti-GFP, 1:1000 dilution (Santa Cruz Biotechnology, Santa Cruz, CA).
Focus reconstruction assay
The focus reconstruction assay was performed essentially as described [
15]. Briefly, MSU-1.1 cells were plated at a density of 5 × 10
4 cells per 100-mm diameter dish containing growth medium supplemented with 0.5% SCS and 20 mM HEPES (pH 7.4) in the presence or absence of tetracycline. On the following day, the cells to be assayed for focus reconstruction were plated (100-200 cells per dish) in these same dishes. Cells received fresh medium every fourth day. After 3 weeks of growth, the cells were fixed with neutral buffered formalin, stained with methylene blue, and then examined for quality and quantity of foci.
Assay for growth factor independence
Cells were plated in growth medium containing 10% SCS into a series of 60-mm diameter dishes at a density of 104 cells per dish and incubated for 48 hr. The cells were then washed twice and growth medium containing 0.5% SCS was added. The number of cells in three replicate dishes was counted at the indicated intervals using a Coulter counter. An equation derived from a best-fit exponential curve was used to determine the doubling time of cells in log-phase growth. This experiment was repeated three times.
Assay for anchorage-independence
Cells were suspended in 0.33% top agarose, then plated into 60-mm-diameter culture dishes at a 5 × 103 cells per dish, and then covered with 2 mL of growth medium. The growth medium was replaced weekly. After three weeks, the cells were fixed with 2.5% glutaraldehyde. This experiment was repeated three times.
Assay for tumorigenicity
To test PH3MT derived cell strains, 10
6 cells were injected subcutaneously into the right and left flank of a series of athymic Balb/c mice. To turn off the dominant-negative form of the proteins, tetracycline was added to the drinking water of half of the mice, at a concentration of 1 mg/ml. To mask the flavor of tetracycline, 5% sucrose was added to the drinking water of all mice. Tumor measurements were made weekly, and mice were sacrificed when a tumor with a volume of 0.5 cm
3 developed on either flank. The tumorigenicity results were displayed in the form of Kaplan-Meier survival plots using MedCalc Version 8.2
http://www.medcalc.be. A log-rank test was used to determine statistical significance.
To determine whether the MSU-1.1 derivative cell strains expressing GFP-RacV12 or GFP-Cdc42V12 were capable of forming tumors in athymic mice, a 1 cm3 absorbable gelatin sponge (Gelfoam size 50, Pharmacia) was placed in each flank. One week later, 107 cells were injected directly into the sponges at each injection site. Such sponges were used to ensure that a high number of injected cells were retained at each injection site.
Affymetrix GeneChip expression analysis
PolyA+RNA was extracted using the Micropure PolyA+RNA extraction kit according to the manufacturer's instructions (Ambion, Applied Biosystems, Austin, TX). To synthesize cRNA products from 3 μg of polyA+RNA, the procedures described in the Affymetrix expression analysis technical manual were followed. Personnel at the Genomics Technology Sequence Facility at Michigan State University carried out the hybridization to the Affymetrix HU95A human genome chip and probed, washed, and scanned the arrays as described in the Affymetrix manual. Such analysis was carried out in duplicate.
Total mRNA expression was calculated for each gene represented on the Affymetrix chip. Expression differences were calculated within each experiment as well as between experiments. This approach resulted in four separate data sets, i.e. both data sets collected from cells grown in the presence of tetracycline were compared to both data sets collected from cells grown in the absence of tetracycline. To ascertain differentially expressed genes, one-way parametric analysis of variance (ANOVA) tests were performed by using a Benjamini-Hochberg false discovery rate (BH FDR) for multiple testing correction, with a P value of 0.05 using MAS5.0 software. The significant changes in each of the four comparisons, as determined by the MAS5.0 software, were identified using Microsoft Access query tool.
ELISA analyses
To detect levels of secreted uPA or VEGF protein from PH3MT derived cells, cells were plated in 100 mm-diameter culture dishes in growth medium containing tetracycline (1 mg/ml). After 24 hr, the medium was removed, the cells were washed twice, and tetracycline-free medium was added. Cells were incubated for another 24 hr to allow for expression of dominant-negative genes. The cells were then washed twice, and given medium lacking serum. After 24 hr the cells were stimulated with growth medium, cobalt chloride (CoCl2) (100 μM), deferoxamine (DFO) (100 μM) or were incubated in a hypoxic chamber (1% O2) for 24 hr. To determine the level of secreted VEGF and uPA protein from MSU-1.1 derivative cell strains, 1.5 × 105 cells were plated in a 100 mm-diameter tissue culture dish containing growth medium, and incubated for 24 hr. The cells were then washed twice with serum-free medium, and serum-starved for another 24 hr before being stimulated with growth medium containing 10% SCS. The media were collected, and centrifuged at 5000 × g for 5 min. To detect secreted VEGF protein, we carried out a sandwich ELISA using the human VEGF DuoSet (R&D Systems, Minneapolis, MN) ELISA kit following the manufacturer's protocol. To detect secreted levels of uPA protein, a similar sandwich ELISA was carried out using the uPA ELISA kit (Oncogene Science, Bayer, Cambridge, MA) according to the manufacturer's protocol.
For all ELISA analyses, after the removal of conditioned medium, whole cell protein extracts were made, quantified, and used to normalize the levels of uPA and VEGF protein detected by dividing the concentration of uPA or VEGF protein in the conditioned medium by the total amount of protein in the whole cell extract, expressed as percent of vector control, or as fold-change. Such experiments were repeated three times. Error bars indicate the standard deviation from the mean. To determine statistical significance, the student's two-tailed t-test was used.
Discussion
In agreement with previous reports conducted in rodent fibroblast cell lines, the data obtained in this study show that both Rac1 and Cdc42 activity are essential for maintaining HRas
V12-induced transformed phenotypes of human fibroblasts [
8,
9,
22]. In addition, we found that activation of Rac1 in non-transformed human fibroblasts results in their ability to grow in the absence of serum-provided growth factors, and that activated Cdc42 potentiates anchorage independent growth. These data corroborate the results of studies conducted with rodent fibroblasts exhibiting these same properties, under identical physiological conditions, and with expression of identical mutant proteins [
8,
10]. A known role for Rho GTPase family members in general, and a specific role for both Rac1 and Cdc42 in various mitotic processes is but one possible way that inhibition of Rac1 and/or Cdc42 may affect the transformed phenotypes measured in this study [
23]. In contrast to the results of rodent studies, expression of activated mutants in human MSU-1.1 cells failed to induce malignant transformation, as defined by tumor growth. It is possible that the GFP tag interferes with the function of these activated mutants, or that levels of these proteins were insufficient to fully transform the human cells. However, expression of these mutants did result in the manifestation of previously reported transformed properties. Therefore, it is likely that malignant transformation of human fibroblasts requires the simultaneous dysregulation of a wide array of independent signalling networks, in addition to those mediated by Rac1 and Cdc42. In support of these findings, recent reports indicate that modification of Ral and caveolin-1-mediated pathways are required for HRas
V12-induced malignant transformation of human fibroblasts, but do not appear to be necessary for malignant transformation of rodent fibroblasts [
11,
24,
25].
Because Rac1 and Cdc42 are essential mediators of HRasV12-induced transformation, we carried out Affymetrix GeneChip analyses of HRasV12-transformed cells expressing tetracycline-regulated Rac1N17 and Cdc42N17 dominant-negative proteins. This allowed us to use the same cell strain as the control and the experimental cell populations. This analysis, allowed us to identify a highly significant group of 29 genes whose level of expression was significantly mediated by Rac1 and/or Cdc42 activity, only 14 of which have previously been reported to play a role in cancer.
It is likely that both Rac1 and Cdc42 mediate the expression of downstream effectors by modulating both post-transcriptional and transcriptional mechanisms. For example, it is known that Ras regulates the activation of JNK pathway mediators which, in some instances, affect the stability of mRNA via A/U rich sequences in the 3'UTR of targeted gene products. Therefore, Rac1 and Cdc42 may regulate both uPA and VEGF expression by altering JNK activity, and thereby regulating uPA and VEGF mRNA stability [
26,
27].
Transcriptional mechanisms also regulate expression of the urokinase plasminogen activator (uPA) protein. Cooperation of two PEA3/AP-1 binding sites in the
uPA promoter is required to mediate TPA-induced uPA expression in NIH3T3 fibroblasts [
28]. Furthermore, it has recently been shown that activation of the PI3K/Akt pathway, known to be upstream of Rac1 and Cdc42 activity, positively correlates with uPA expression in an ovarian cancer cell line [
29]. Research from our laboratory has demonstrated that receptor bound uPA is present at higher levels in fibroblasts capable of forming fibrosarcomas including those transformed by N-, K-, or HRas
V12 than it is in a number of normal, non-tumorigenic human fibroblast cell strains [
18]. The results of our present study indicate that both Rac1 and Cdc42 regulate HRas
V12-induced uPA expression in parallel pathways, perhaps through JNK and AP-1 regulation. However, expression of activated Rac1 or Cdc42 did not induce uPA protein expression in the parental MSU-1.1 human fibroblasts. This may be partially explained by the results reported by Aguirre-Ghiso et al. [
30] who found that expression of dominant-negative RalA protein in v-Ras transformed NIH3T3 cells completely abrogated v-Ras-induced uPA expression, as well as blocked tumor formation. Taken together, these results strongly suggest that Ras-induced RalA, Rac1 and Cdc42 activities are all required to co-ordinately regulate secreted levels of uPA protein in human fibroblasts, and that expression of these proteins individually is not sufficient to induce uPA expression.
VEGF is the best-studied mediator of angiogenesis [
31]. Our results show that in non-hypoxic conditions, HRas
V12 induces VEGF expression in a Rac1-dependent manner, whereas Cdc42 plays only a partial role. Therefore, it is tempting to postulate that in this instance, Cdc42 mediates one of multiple signalling pathways downstream of Rac1, that when inactivated, partially disrupts VEGF secretion. Ras-induced VEGF expression is regulated by multiple mechanisms, including increased transcription, translation and mRNA stabilization [
20,
27,
32‐
34]. For example, it has been shown that activation of ERK1/2, through the Raf-mediated Ras pathway, increases the activity of HIF1 and Sp1 transcription factors [
20,
33]. However, recent data from our laboratory indicate that reduction of Sp1 expression in HRas
V12-transformed human fibroblasts does not affect expression of VEGF [
35]. Saniger et al. [
34] recently reported that activation of either Rac1 or Cdc42 can induce transcription of VEGF through activation of JNK, which results in increased transcription of the VEGF gene product. Although multiple Rac1 and Cdc42 independent pathways affecting HIF1 transcriptional networks exist [
36], it is possible that in HRas
V12-transformed human fibroblasts, Rac1 may play a partial role in stabilizing HIF1 and/or activating JNK, which then modulates secretion of VEGF protein.
Rac1 and Cdc42 have also been implicated in hypoxic-induction of VEGF expression through regulation of p53 and VHL protein levels, as well as HIF1, and JNK activation [
20,
21,
34]. In agreement with these studies, we find that both Rac1 and Cdc42 play a role in hypoxia-induced VEGF expression in HRas
V12-transformed fibroblasts. We also show that both Rac1 and Cdc42 mediate VEGF expression under hypoxic conditions. However, under the same conditions, inhibition of both Rac1 and Cdc42 did not result in an additive suppression of VEGF. In contrast, complete reduction in VEGF secretion by these cells in the presence of hypoxia mimetics DFO and CoCl
2 was observed. This may result from mechanistic differences in simulation of hypoxia using mimetics compared to true hypoxic conditions, a result that has been observed previously [
20].
As noted above, In MSU-1.1 human cells, expression of activated Cdc42, but not activated Rac1, results in high levels of secreted VEGF protein. This indicates that Cdc42 regulates the expression of VEGF in the absence of other Ras-mediated effector pathways, whereas Rac1 does not. It has been shown that activation of Ost, the RhoA- and Cdc42-specific GEF, can potently induce JNK transcriptional pathways, and that Cdc42 can regulate EGFR signalling in an autocrine fashion, both potentially impacting on the expression of VEGF [
37,
38]. This may explain the ability of activated Cdc42, but not Rac1 to induce VEGF secretion in the absence of Ras activity.
Competing interests
The authors declare that they have no competing interests.
Authors' contributions
DMA and K-HTD collected and analyzed data from all experiments and co-authored the manuscript. SOR completed all animal experiments. VMM extensively reviewed and edited the manuscript. JJM supported and directed the study. All authors reviewed and approved the final manuscript.