Supplementary table 6 DEERGs and their predictive value between LN positive and negative cases SYMBOL AUC 1 ACTL6A 0.610401891 2 ACTN4 0.619070134 3 ACVR1 0.571284476 4 ADAM17 0.627044917 5 AFAP1L2 0.616012608 6 AHR 0.578092987 7 AKT2 0.606934594 8 ALAD 0.658660362 9 ANG 0.630449173 10 APBB1 0.631237195 11 ARMC8 0.608100867 12 ATXN1 0.582411348 13 AURKA 0.687785658 14 AXIN2 0.573995272 15 BCL2 0.612923562 16 BCL2L1 0.651158392 17 BIRC5 0.648699764 18 BMP7 0.638959811 19 BRCA1 0.561639086 20 BRD4 0.618628842 21 BSG 0.592340426 22 BVES 0.566398739 23 C20orf56 0.663262411 24 C5orf13 0.623167849 25 CARD10 0.605547675 26 CBY1 0.599495666 27 CCNA2 0.62249015 28 CDH5 0.583010244 29 CDKL2 0.601859732 30 CDKN1A 0.614373522 31 CDKN1B 0.580929866 32 CDKN2A 0.639810875 33 CEBPB 0.616390859 34 CIRBP 0.689487786 35 CLDN1 0.619101655 36 CLDN4 0.565673759 37 CMTM8 0.596028369 38 COL8A1 0.592939322 39 COL8A2 0.627990544 40 CPEB1 0.61070134 41 CRKL 0.608163909 42 CTNNBIP1 0.641260835 43 CXCL16 0.538345154 44 CYB5R1 0.683246651 45 DDR1 0.54534279 46 DLX4 0.62892041 47 DYRK2 0.650401891 48 E2F1 0.65251379 49 ECT2 0.618691883 50 EFNB2 0.637462569 51 EHD1 0.600977147 52 EIF4G1 0.632939322 53 ELK1 0.576233255 54 ENO1 0.581812451 55 EPB41L5 0.557746257 56 EPHA2 0.620740741 57 EPHB2 0.666918834 58 EPHB3 0.558234831 59 EPS8 0.571095351 60 ERBB2 0.627454689 61 ERF 0.632813239 62 ERG 0.639842396 63 ESR1 0.695413712 64 ETS2 0.63107959 65 EZH2 0.586461781 66 EZR 0.631237195 67 F11R 0.586761229 68 F2RL2 0.467580772 69 FAM195B 0.56535855 70 FAM3C 0.586572104 71 FASN 0.609676911 72 FBLN1 0.626572104 73 FBP1 0.694720252 74 FBXW7 0.576233255 75 FERMT2 0.590764381 76 FHL1 0.572324665 77 FLNA 0.671268716 78 FMR1 0.596122931 79 FN1 0.561292356 80 FOXA2 0.6292829 81 FOXC1 0.555240347 82 FOXK2 0.602364066 83 FOXM1 0.66323089 84 FSCN1 0.604948779 85 FSTL1 0.576611505 86 G3BP1 0.567943262 87 GAB2 0.569188337 88 GIPC2 0.554342002 89 GLO1 0.605768322 90 GLS 0.65784082 91 GMNN 0.620173365 92 GNA13 0.585626478 93 GOLM1 0.64394011 94 GPI 0.616154452 95 GRHL2 0.619952719 96 GRIN1 0.649014972 97 GSK3A 0.570780142 98 H19 0.615508274 99 H2AFX 0.602805359 100 HDAC1 0.600472813 101 HDAC2 0.612198582 102 HDAC3 0.605421592 103 HDAC4 0.576895193 104 HDAC6 0.546950355 105 HDGF 0.666099291 106 HMGA2 0.65320725 107 HMGB3 0.588967691 108 HOXA10 0.5735855 109 HOXA9 0.59462569 110 HOXB7 0.626698188 111 HPGD 0.594909377 112 HPSE 0.663183609 113 HSPB2 0.64249015 114 IL11 0.589724192 115 IRF6 0.605988968 116 ISG15 0.554767533 117 ITGB3 0.639842396 118 ITGB6 0.528857368 119 JAK2 0.587580772 120 JUB 0.644964539 121 KCNN4 0.601859732 122 KDM3A 0.581339638 123 KDM4B 0.655476753 124 KHDRBS1 0.592624113 125 KIAA1524 0.645106383 126 KLF6 0.580866824 127 KLF8 0.605327029 128 KLK6 0.628951931 129 KRAS 0.606115051 130 KRT7 0.608100867 131 L1CAM 0.689014972 132 LAMA5 0.588810087 133 LASP1 0.600693459 134 LEF1 0.63000788 135 LIF 0.56608353 136 LIMS1 0.60964539 137 LMNB1 0.620047281 138 LOXL3 0.625059102 139 LRIG1 0.587580772 140 MACC1 0.571914894 141 MAGED1 0.576327817 142 MAP3K3 0.636280536 143 MAP3K7 0.597698976 144 MAP4K4 0.592907801 145 MAPK14 0.642237983 146 MAPK3 0.605043341 147 MAPK7 0.561576044 148 MARVELD1 0.588242711 149 MARVELD3 0.584144996 150 MCAM 0.5843026 151 MCL1 0.572293144 152 MDM2 0.63000788 153 MICALL2 0.585153664 154 MLLT3 0.667643814 155 MMP1 0.574562648 156 MRC2 0.585910165 157 MSN 0.636249015 158 MST4 0.626004728 159 MTHFD2 0.621182033 160 MTUS1 0.635807723 161 MYB 0.597667455 162 MYBL2 0.647880221 163 MYC 0.588494878 164 MYST1 0.548431836 165 MZF1 0.594893617 166 NCL 0.619669031 167 NCOA3 0.56570528 168 NCSTN 0.574342002 169 NDRG1 0.606146572 170 NDRG2 0.622411348 171 NFIC 0.601828211 172 NFIL3 0.589598109 173 NODAL 0.492214342 174 NOTCH2 0.607691095 175 NOTCH3 0.610843184 176 NTN1 0.586918834 177 NTN4 0.560315209 178 NUCB2 0.665090623 179 NUMB 0.652324665 180 OLA1 0.571662727 181 PAK4 0.570307329 182 PARD3 0.640788022 183 PCMT1 0.631300236 184 PCSK1 0.622379827 185 PDCD4 0.582222222 186 PDGFD 0.587328605 187 PGF 0.554830575 188 PIK3CA 0.62179669 189 PIK3R1 0.666887313 190 PIK3R3 0.628589441 191 PITPNM1 0.63680063 192 PLA2G4A 0.616264775 193 PLXND1 0.606493302 194 PPARGC1A 0.628085106 195 PPM1D 0.597919622 196 PPP2R4 0.591646966 197 PRKAA2 0.581623325 198 PRKCE 0.570070922 199 PRKCI 0.638234831 200 PRKCQ 0.581686367 201 PTHLH 0.532198582 202 PTP4A2 0.628116627 203 PTP4A3 0.562679275 204 QKI 0.586382979 205 RAB22A 0.568321513 206 RAB43 0.547549251 207 RGS3 0.604223798 208 RNF8 0.578628842 209 RORC 0.577651694 210 SCIN 0.492765957 211 SEMA3E 0.64464933 212 SENP1 0.57784082 213 SENP2 0.654562648 214 SERPINE1 0.538471237 215 SETD8 0.590732861 216 SIM2 0.574783294 217 SIRT3 0.554483846 218 SKI 0.582978723 219 SKIL 0.565642238 220 SLC2A1 0.64072498 221 SLC39A6 0.585910165 222 SLC9A3R1 0.573427896 223 SMAD3 0.584743893 224 SMAD9 0.59429472 225 SMC3 0.597935382 226 SNAI1 0.590417652 227 SOCS3 0.594578408 228 SOX17 0.645642238 229 SOX5 0.57427896 230 SPDEF 0.685768322 231 SPHK1 0.595429472 232 SREBF1 0.607754137 233 SRF 0.638486998 234 SRI 0.567911742 235 STAT1 0.634137116 236 STIM1 0.612009456 237 STK11 0.582190701 238 TACC3 0.640788022 239 TBL1XR1 0.593317573 240 TDGF1 0.635271868 241 TEAD1 0.574877857 242 TEAD2 0.5521513 243 TET3 0.560661939 244 TGFB1 0.609866036 245 TGFBR1 0.537210402 246 TIMELESS 0.632277384 247 TIMP2 0.612923562 248 TLE1 0.589472025 249 TLE4 0.566367218 250 TNFSF10 0.571662727 251 TNFSF12 0.620173365 252 TP53BP2 0.626997636 253 TP73 0.628400315 254 TRIM28 0.639306541 255 TRIM62 0.585090623 256 TRPS1 0.624680851 257 TXN 0.60608353 258 TXNIP 0.602427108 259 TYMS 0.631741529 260 TYRO3 0.576233255 261 USP22 0.458250591 262 XBP1 0.668242711 263 XRN2 0.578660362 264 YBX1 0.62786446 265 YY1 0.635051221 266 ZBTB33 0.541465721 AUC: area under curve