LOCUS       BSeq#1                   555 bp    DNA     linear   VRL 12-JUN-2018
DEFINITION  Schefflera ringspot virus isolate Minnesota.
ACCESSION   BSeq#1
VERSION
KEYWORDS    .
SOURCE      Schefflera ringspot virus
  ORGANISM  Schefflera ringspot virus
            Viruses; Ortervirales; Caulimoviridae; Badnavirus.
REFERENCE   1  (bases 1 to 555)
  AUTHORS   Alvarez-Quinto,R.A. and Lockhart,B.E.L.
  TITLE     Complete genome sequence of a new badnavirus isolated from ming
            aralia (Polyscias fruticosa L. Harms)
  JOURNAL   unpublished
REFERENCE   2  (bases 1 to 555)
  AUTHORS   Lockhart,B.E.L.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUN-2018) Plant Pathology, University of Minnesota,
            1991 Upper Buford Circle, St. Paul, MN 55108, USA
COMMENT     Bankit Comment: ALT EMAIL: lockh002@umn.edu
            Bankit Comment: TOTAL # OF SEQS:1
            
            ##Assembly-Data-START##
            Sequencing Technology :: Sanger dideoxy sequencing
            ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Schefflera ringspot virus"
                     /mol_type="genomic DNA"
                     /isolate="Minnesota"
                     /host="Schefflera sp."
                     /db_xref="taxon:2169729"
                     /country="USA"
                     /collected_by="Lockhart, B.E.L"
     CDS             <1..>555
                     /note="Badnavirus polyprotein; RT and RNAse H domains"
                     /codon_start=1
                     /product="ORF3, partial polyprotein"
                     /translation="YIDDILVFSETPEEHVKHLKVLFRIVKENGLVLSPTKMKIGVKQ
                     IEFLGAVITNGCLSLQENILKKIAAFGPEQYQTKKDLRSWLGLVNYARIYIPNLGRIL
                     GPLYSKTSPQGEARMNLEDWKIVHKVQQAIQTLPKLEVPPPGSTIVIESDGCMDGWGA
                     VCKWKSNAKDPIKTERICAYASGSY"
     primer_bind     1..17
                     /note="Badna 2"
BASE COUNT      178 a     95 c    137 g    141 t      4 others
ORIGIN      
        1 tayattgayg ayatwctggt attctcagaa acaccagagg aacacgtaaa gcacttgaag
       61 gtgttgttca ggatagtcaa ggagaatggt ttggtcctta gcccaacaaa gatgaaaatt
      121 ggggttaagc agatcgagtt cttgggagct gttattacta acggttgttt atctttgcag
      181 gaaaacattc tgaagaagat tgcagcattt ggcccagaac agtatcagac caagaaggat
      241 ttgagatcgt ggcttggatt ggttaattat gctaggattt acattcctaa tttgggaaga
      301 atcttaggcc cattgtactc aaaaaccagc ccacaaggag aagcccgaat gaatttggaa
      361 gactggaaga ttgttcataa agtccaacag gcaatccaga ctctaccaaa attagaagtg
      421 ccgcccccag gttcaacaat tgttattgaa tcagacggat gtatggatgg ttggggtgca
      481 gtttgtaagt ggaagtccaa tgcaaaagat ccaattaaga cagaacggat atgtgcatac
      541 gcaagcgggt catac
//