Background
Methods
Study site, period and socio-demographic data
Sample collection and inoculation of primary isolation culture media
Inoculum size determination
Identification and determination of antimicrobial susceptibility
Quality control
Ethical clearance
Results
Variable | Categories | Samples collected n = 712 | Sample s collected n = 712 | |
---|---|---|---|---|
UTI yes = 256 | UTI no = 456 | |||
Gender | Female | 519 (72.9) | 208(81.2) | 311(68.2) |
Male | 193 (27.1) | 48(18.8) | 145 (31.8) | |
Total | 712 (100) | 256(100) | 456 (100) | |
Age group | <1 | 28 (3.9) | 18(7.0) | 10 (2.2) |
1–14 | 55 (7.7) | 11(4.3) | 44 (9.6) | |
15–24 | 74 (10.4) | 29(11.3) | 45(9.9) | |
25–44 | 330 (46.3) | 112(43.8) | 218(47.8) | |
45–64 | 152 (21.3) | 51(19.9) | 101 (22.1) | |
65+ | 73 (10.3) | 35(13.7) | 38 (8.3) | |
Total | 712 (100) | 256(100) | 456 (100) |
Genus | Species |
n (%) of the total isolates |
---|---|---|
Escherichia
|
E. coli
| 135 (52.7) |
Klebsiella
|
K. pneumonia
| 18 (7.0) |
K. oxytoca
| 1 (0.4) | |
Pseudomonas
|
P. aeruginosa
| 3 (1.2) |
P. fluorescens
| 1 (0.4) | |
P. luteola
| 2 (0.8) | |
Moraxella
|
M. nonliquefiens
| 3 (1.2) |
Citrobacter
|
C. diversus
| 2 (0.8) |
C. freundii
| 1 (0.4) | |
Acinetobacter
|
A.baumannii
| 2 (0.8) |
Providencia
|
P. alcalifaciens
| 1 (0.4) |
P. rettgeri
| 1 (0.4) | |
Francisella
|
F. tularensis
| 1 (0.4) |
Morganella
|
M. morganii
| 1(0.4) |
Sphingomonas
|
S. paucimobilis
| 3(1.2) |
Total (10) | 15 | 175 (68.4) |
Genus | Species |
n (%) of the total isolates |
---|---|---|
Staphylococcus
|
S. saprophytics
| 18 (7.0) |
S. aureus
| 9 (3.5) | |
S. warneri
| 9 (3.5) | |
S. epidermidis
| 8 (3.1) | |
S. hominis
| 6 (2.3) | |
S. lentus
| 3 (1.2) | |
S. haemolyticus
| 2 (0.8) | |
Streptococcus
|
S. agalactiae
| 8 (3.1) |
S. porcinus
| 1 (0.4) | |
Enterococcus
|
E. faecalis
| 14 (5.5) |
E. gallinarum
| 1 (0.4) | |
Kocuria
|
K. kristinae
| 2 (0.8) |
Total (4)
|
12
| 81 (31.6) |
Species | Antibacterial drugs | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AM | AMC | CF | CZ | CXM | CXMA | FOX | CPD | CAZ | CRO | FEP | CIP | GM | LEV | FT | TM | TE | SXT | TZP | |
E. Coli (135)
| 77.8 | 45.2 | 59.3 | 42.2 | 43.7 | 45.2 | 22.9 | 37.8 | 35.6 | 34.8 | 43.7 | 50.4 | 28.1 | 55.6 | 20.0 | 39.3 | 69.6 | 70.4 | 21.5 |
K. pneumoniae (18).
| 100 | 22.2 | 55.6 | 50 | 44.4 | 44.4 | 5.6 | 44.4 | 44.4 | 44.4 | 50 | 16.7 | 22.2 | 11.1 | 61.1 | 38.9 | 44.4 | 66.7 | 5.6 |
P. aeruginosa(3)
| 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 33.3 | 100 | 33.3 | 33.3 | 0 | 0 | 100 | 0 | 100 | 100 | 33.3 |
M. nonliquefaciensm(3)
| 100 | 0 | 100 | 100 | 100 | 100 | 0 | 100 | 0 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 0 |
C. diversus (2)
| 100 | 100 | 100 | 100 | 50 | 100 | 100 | 50 | 50 | 50 | 50 | 50 | 0 | 0 | 0 | 0 | 0 | 100 | 0 |
A.baumannii (2)
| 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 0 | 100 | 0 | 50 | 0 | 0 | 100 | 0 | 0 | 0 | 0 |
P. luteola (2)
| 50 | 0 | 50 | 50 | 50 | 50 | 50 | 50 | 0 | 0 | 0 | 0 | 0 | 0 | 50 | 0 | 0 | 0 | 0 |
K. oxytoca (1)
| 100 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 100 | 0 | 0 | 0 | 0 |
P.fluoresces (1)
| 100 | 100 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 100 | 0 | 0 |
M. morganii (1)
| 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 0 | 0 | 100 | 0 | 0 | 100 | 0 | 0 | 100 | 0 |
C. freundii (1)
| 0 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 0 | 0 | 0 | 100 | 0 | 100 | 100 | 0 | 100 | 100 | 0 |
P.alcalifaciens (1)
| 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 100 | 0 | 0 | 0 | 0 |
P.rettgeri (1)
| 0 | 0 | 0 | 0 | 100 | 0 | 0 | 0 | 0 | 100 | 0 | 100 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
S.Paucimobilis (3)
| 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
F. tularensis (1)
| 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
All isolates | 78.3 | 42.9 | 58.9 | 45.1 | 45.7 | 46.9 | 24 | 40.6 | 33.7 | 37.1 | 41.7 | 45.7 | 25.7 | 46.3 | 29.1 | 36 | 62.9 | 66.9 | 17.7 |
Species | Antibacterial drugs | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CIP | CM | E | GM | LEV | MNO | MXF | FT | QDA | RA | TE | TGC | SXT | LIN | VA | DAP | |
E. faecalis (14)
| 7.1 | 7.1 | 85.8 | 0 | 0 | 85.8 | 0 | 0 | 100 | 0 | 78.6 | 7.1 | 7.1 | 7.1 | 0 | 0 |
S. aureus (9)
| 33.3 | 66.7 | 66.7 | 22.2 | 22.2 | 11.1 | 0 | 0 | 22.2 | 33.3 | 66.7 | 33.3 | 55.6 | 0 | 0 | 0 |
S. epidermidis (8)
| 62.5 | 100 | 75 | 0 | 62.5 | 12.5 | 0 | 0 | 50 | 50 | 62.5 | 25 | 25 | 37.5 | 0 | – |
S.saprophyticus (18)
| 27.8 | 88.9 | 94.4 | 16.7 | 38.9 | 0 | 38.9 | 5.6 | 38.9 | 50 | 72.2 | 0 | 55.6 | 5.6 | 0 | 5.6 |
S. agalactiae (8)
| 0 | 100 | – | – | 0 | – | – | – | 0 | – | 100 | 25 | – | 0 | 0 | – |
S. haemolyticus (2)
| 0 | 50 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 50 | 0 | 0 | 0 | – | 0 | 0 |
S. lentus (3)
| 100 | 33.3 | 66.7 | 0 | 66.7 | 66.7 | 33.3 | 0 | 66.7 | 33.3 | 100 | 0 | 100 | 0 | 0 | 0 |
S. hominis (6)
| 66.7 | 100 | 100 | 0 | 66.7 | 50 | 0 | 0 | 66.7 | 66.7 | 83.3 | 0 | 50 | 0 | 0 | 0 |
S. warneri (9)
| 44.4 | 66.7 | 77.8 | 0 | 22.2 | 22.2 | 11.1 | 11.1 | 11.1 | 44.4 | 77.8 | 0 | 55.6 | 0 | 0 | – |
K. kristinae (2)
| 100 | 50 | 100 | 0 | – | – | – | – | – | – | – | – | – | – | – | – |
S. porcinus (1) | 0 | – | 100 | – | – | – | – | – | – | – | – | – | – | – | – | |
E. gallinarum (1) | 100 | – | 100 | – | 100 | 100 | – | 0 | – | – | 100 | – | – | 100 | 0 | – |
All isolates | 34.6 | 68.4 | 82.2 | 7.0 | 29.5 | 31.4 | 13.1 | 2.9 | 44.2 | 37.7 | 75.6 | 10.4 | 42 | 7.9 | 0 | 1.9 |