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Erschienen in: Archives of Virology 5/2017

04.02.2017 | Annotated Sequence Record

Tomato leaf curl Burkina Faso virus: a novel tomato-infecting monopartite begomovirus from Burkina Faso

verfasst von: Alassane Ouattara, Fidèle Tiendrébéogo, Pierre Lefeuvre, Sohini Claverie, Murielle Hoareau, Edgard Valentin Traoré, Nicolas Barro, Oumar Traoré, Jean-Michel Lett

Erschienen in: Archives of Virology | Ausgabe 5/2017

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Abstract

In this report, we present the first description of the complete genome sequence of a new monopartite begomovirus isolated from tomatoes collected in Burkina Faso and presenting with symptoms of tomato leaf curl disease. We propose the tentative name “tomato leaf curl Burkina Faso virus’’ (ToLCBFV). DNA-A-like nucleotide sequence of ToLCBFV shares the highest nucleotide sequence identity (85%) with the pepper yellow vein Mali virus (PepYVMLV). Phylogenetic analysis confirmed the affiliation of ToLCBFV to Old World monopartite begomoviruses. This discovery of a new species confirms the existence of high genetic diversity in monopartite begomoviruses in sub-Saharan Africa and particularly in West Africa.
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Literatur
1.
Zurück zum Zitat Arguello-Astorga GR, Ruiz-Medrano R (2001) An iteron-related domain is associated to Motif 1 in the replication proteins of geminiviruses: identification of potential interacting amino acid–base pairs by a comparative approach. Arch Virol 146:1465–1485CrossRefPubMed Arguello-Astorga GR, Ruiz-Medrano R (2001) An iteron-related domain is associated to Motif 1 in the replication proteins of geminiviruses: identification of potential interacting amino acid–base pairs by a comparative approach. Arch Virol 146:1465–1485CrossRefPubMed
2.
Zurück zum Zitat Briddon RW, Bull SE, Mansoor S, Amin I, Markham PG (2002) Universal primers for the PCR-mediated amplification of DNA beta—a molecule associated with some monopartite begomoviruses. Mol Biotechnol 20:315–318CrossRefPubMed Briddon RW, Bull SE, Mansoor S, Amin I, Markham PG (2002) Universal primers for the PCR-mediated amplification of DNA beta—a molecule associated with some monopartite begomoviruses. Mol Biotechnol 20:315–318CrossRefPubMed
3.
Zurück zum Zitat Brown JK, Zerbini FM, Navas-Castillo J, Moriones E, Ramos-Sobrinho R, Silva JCF, Fiallo-Olive E, Briddon RW, Hernandez-Zepeda C, Idris A, Malathi VG, Martin DP, Rivera-Bustamante R, Ueda S, Varsani A (2015) Revision of Begomovirus taxonomy based on pairwise sequence comparisons. Arch Virol 160:1593–1619CrossRefPubMed Brown JK, Zerbini FM, Navas-Castillo J, Moriones E, Ramos-Sobrinho R, Silva JCF, Fiallo-Olive E, Briddon RW, Hernandez-Zepeda C, Idris A, Malathi VG, Martin DP, Rivera-Bustamante R, Ueda S, Varsani A (2015) Revision of Begomovirus taxonomy based on pairwise sequence comparisons. Arch Virol 160:1593–1619CrossRefPubMed
4.
Zurück zum Zitat Leke WN, Mignouna DB, Brown JK, Kvarnheden A (2015) Begomovirus disease complex: emerging threat to vegetable production systems of West and Central Africa. Agric Food Secur 4:1–4 Leke WN, Mignouna DB, Brown JK, Kvarnheden A (2015) Begomovirus disease complex: emerging threat to vegetable production systems of West and Central Africa. Agric Food Secur 4:1–4
5.
Zurück zum Zitat Muhire BM, Varsani A, Martin DP (2014) SDT: A virus classification tool based on pairwise sequence alignment and identity calculation. Plos One 9:1–8 Muhire BM, Varsani A, Martin DP (2014) SDT: A virus classification tool based on pairwise sequence alignment and identity calculation. Plos One 9:1–8
6.
Zurück zum Zitat Navas-Castillo J, Fiallo-Olivé E, Sánchez-Campos S (2011) Emerging virus diseases transmitted by whiteflies. Ann Rev Phytopathol 49:219–248CrossRef Navas-Castillo J, Fiallo-Olivé E, Sánchez-Campos S (2011) Emerging virus diseases transmitted by whiteflies. Ann Rev Phytopathol 49:219–248CrossRef
7.
Zurück zum Zitat Rey MEC, Ndunguru J, Berrie LC, Paximadis M, Berry S, Cossa N, Nuaila VN, Mabasa KG, Abraham N, Rybicki EP, Martin D, Pietersen G, Esterhuizen LL (2012) Diversity of dicotyledenous-infecting geminiviruses and their associated DNA molecules in Southern Africa, including the South-West Indian Ocean Islands. Viruses 4:1753–1791CrossRefPubMedPubMedCentral Rey MEC, Ndunguru J, Berrie LC, Paximadis M, Berry S, Cossa N, Nuaila VN, Mabasa KG, Abraham N, Rybicki EP, Martin D, Pietersen G, Esterhuizen LL (2012) Diversity of dicotyledenous-infecting geminiviruses and their associated DNA molecules in Southern Africa, including the South-West Indian Ocean Islands. Viruses 4:1753–1791CrossRefPubMedPubMedCentral
8.
Zurück zum Zitat Rojas MR, Gilbertson RL, Russel DR, Maxwell DP (1993) Use of degenerate primers in the polymerase chain reaction to detect whitefly-transmitted geminivirus. Plant Dis 77:340–347CrossRef Rojas MR, Gilbertson RL, Russel DR, Maxwell DP (1993) Use of degenerate primers in the polymerase chain reaction to detect whitefly-transmitted geminivirus. Plant Dis 77:340–347CrossRef
9.
Zurück zum Zitat Rojas MR, Hagen C, Lucas WJ, Gilbertson RL (2005) Exploiting chinks in the plant’s armor: evolution and emergence of geminiviruses. Annu Rev Phytopathol 43:361–394CrossRefPubMed Rojas MR, Hagen C, Lucas WJ, Gilbertson RL (2005) Exploiting chinks in the plant’s armor: evolution and emergence of geminiviruses. Annu Rev Phytopathol 43:361–394CrossRefPubMed
10.
Zurück zum Zitat Tiendrebeogo F, Lefeuvre P, Hoareau M, Traore VS, Barro N, Perefarres F, Reynaud B, Traore AS, Konate G, Lett JM, Traore O (2011) Molecular and biological characterization of pepper yellow vein Mali virus (PepYVMV) isolates associated with pepper yellow vein disease in Burkina Faso. Arch Virol 156:483–487CrossRefPubMed Tiendrebeogo F, Lefeuvre P, Hoareau M, Traore VS, Barro N, Perefarres F, Reynaud B, Traore AS, Konate G, Lett JM, Traore O (2011) Molecular and biological characterization of pepper yellow vein Mali virus (PepYVMV) isolates associated with pepper yellow vein disease in Burkina Faso. Arch Virol 156:483–487CrossRefPubMed
Metadaten
Titel
Tomato leaf curl Burkina Faso virus: a novel tomato-infecting monopartite begomovirus from Burkina Faso
verfasst von
Alassane Ouattara
Fidèle Tiendrébéogo
Pierre Lefeuvre
Sohini Claverie
Murielle Hoareau
Edgard Valentin Traoré
Nicolas Barro
Oumar Traoré
Jean-Michel Lett
Publikationsdatum
04.02.2017
Verlag
Springer Vienna
Erschienen in
Archives of Virology / Ausgabe 5/2017
Print ISSN: 0304-8608
Elektronische ISSN: 1432-8798
DOI
https://doi.org/10.1007/s00705-017-3231-6

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