nach oben

Erschienen in:

04.06.2018 | Brief Report

Whole genome analysis of a novel neurotropic bovine astrovirus detected in a Japanese black steer with non-suppurative encephalomyelitis in Japan

verfasst von: Yoshimasa Hirashima, Daisuke Okada, Shoichi Shibata, Shu Yoshida, Shoichiro Fujisono, Tsutomu Omatsu, Tetsuya Mizutani, Makoto Nagai

Erschienen in: Archives of Virology | Ausgabe 10/2018

Einloggen, um Zugang zu erhalten

Abstract

While neurotropic bovine astroviruses (BoAstVs) have been identified in North America and Europe, their presence has never been reported in Asia. In this study, we detected BoAstV in the brain of a steer showing neurological signs. Phylogenetic analysis revealed that the identified virus belongs to the Virginia/Human-Mink-Ovine clade, which contains most of the neurotropic astroviruses including the neurotropic BoAstVs. Similarity plot analysis showed that the virus was closely related to the American BoAstV NeuroS1 strain with respect to the ORF regions and to the European BoAstV CH13 strain in the 3′ untranslated region, suggesting the occurrence of intra-genotypic recombination events.

Nur mit Berechtigung zugänglich

De Benedictis P, Schultz-Cherry S, Burnham A, Cattoli G (2011) Astrovirus infections in humans and animals—molecular biology, genetic diversity, and interspecies transmissions. Infect Genet Evol 11:1529–1544CrossRefPubMed

Donato C, Vijaykrishna D (2017) The broad host range and genetic diversity of mammalian and avian astroviruses. Viruses 9:E102CrossRefPubMed

Bridger JC, Hall GA, Brown JF (1984) Characterization of a calici-like virus (Newbury agent) found in association with astrovirus in bovine diarrhea. Infect Immun 43:133–138PubMedPubMedCentral

Cordey S, Brito F, Vu DL, Turin L, Kilowoko M, Kyungu E, Genton B, Zdobnov EM, D’Acremont V, Kaiser L (2016) Astrovirus VA1 identified by next-generation sequencing in a nasopharyngeal specimen of a febrile tanzanian child with acute respiratory disease of unknown etiology. Emerg Microbes Infect 5:e99CrossRefPubMedPubMedCentral

Padmanabhan A, Hause BM (2016) Detection and characterization of a novel genotype of porcine astrovirus 4 from nasal swabs from pigs with acute respiratory disease. Arch Virol 161:2575–2579CrossRefPubMed

Ng TF, Kondov NO, Deng X, Van Eenennaam A, Neibergs HL, Delwart E (2015) A metagenomics and case-control study to identify viruses associated with bovine respiratory disease. J Virol 89:5340–5349CrossRefPubMedPubMedCentral

Quan PL, Wagner TA, Briese T, Torgerson TR, Hornig M, Tashmukhamedova A, Firth C, Palacios G, Baisre-De-Leon A, Paddock CD, Hutchison SK, Egholm M, Zaki SR, Goldman JE, Ochs HD, Lipkin W (2010) Astrovirus encephalitis in boy with X-linked agammaglobulinemia. Emerg Infect Dis 16:918–925CrossRefPubMedPubMedCentral

Brown JR, Morfopoulou S, Hubb J, Emmett WA, Ip W, Shah D, Brooks T, Paine SM, Anderson G, Virasami A, Tong CY, Clark DA, Plagnol V, Jacques TS, Qasim W, Hubank M, Breuer J (2015) Astrovirus VA1/HMO-C: An increasingly recognized neurotropic pathogen in immunocompromised patients. Clin Infect Dis 60:881–888CrossRefPubMedPubMedCentral

Cordey S, Vu DL, Schibler M, L’Huillier AG, Brito F, Docquier M, Posfay-Barbe KM, Petty TJ, Turin L, Zdobnov EM, Kaiser L (2016) Astrovirus MLB2: A new gastro-enteric virus associated with meningitis and disseminated infection. Emerg Infect Dis 22:846–853CrossRefPubMedPubMedCentral

10.

Blomstrom AL, Widen F, Hammer AS, Belak S, Berg M (2010) Detection of a novel astrovirus in brain tissue of mink suffering from shaking mink syndrome by use of viral metagenomics. J Clin Microbiol 48:4392–4396CrossRefPubMedPubMedCentral

11.

Pfaff F, Schlottau K, Scholes S, Courtenay A, Hoffmann B, Höper D, Beer M (2017) A novel astrovirus associated with encephalitis and ganglionitis in domestic sheep. Transbound Emerg Dis 64:677–682CrossRefPubMed

12.

Boros Á, Albert M, Pankovics P, Bíró H, Pesavento PA, Phan TG, Delwart E, Reuter G (2017) Outbreaks of neuroinvasive astrovirus associated with encephalomyelitis, weakness, and paralysis among weaned pigs, Hungary. Emerg Infect Dis 23:1982–1993CrossRefPubMedPubMedCentral

13.

Arruda B, Arruda P, Hensch M, Chen Q, Zheng Y, Yang C, Gatto IRH, Ferreyra FM, Gauger P, Schwartz K, Bradner L, Harmon K, Hause B, Li G (2017) Porcine astrovirus type 3 in central nervous system of swine with polioencephalomyelitis. Emerg Infect Dis 23:2097–2100CrossRefPubMedPubMedCentral

14.

Li L, Diab S, McGraw S, Barr B, Traslavina R, Higgins R, Talbot T, Blanchard P, Rimoldi G, Fahsbender E, Page B, Phan TG, Wang C, Deng X, Pesavento P, Delwart E (2013) Divergent astrovirus associated with neurologic disease in cattle. Emerg Infect Dis 19:1385–1392CrossRefPubMedPubMedCentral

15.

Bouzalas IG, Wüthrich D, Walland J, Drögemüller C, Zurbriggen A, Vandevelde M, Oevermann A, Bruggmann R, Seuberlich T (2014) Neurotropic astrovirus in cattle with nonsuppurative encephalitis in Europe. J Clin Microbiol 52:3318–3324CrossRefPubMedPubMedCentral

16.

Seuberlich T, Wüthrich D, Selimovic-Hamza S, Drögemüller C, Oevermann A, Bruggmann R, Bouzalas I (2016) Identification of a second encephalitis-associated astrovirus in cattle. Emerg Microbes Infect 5:e71CrossRefPubMed

17.

Schlottau K, Schulze C, Bilk S, Hanke D, Höper D, Beer M, Hoffmann B (2016) Detection of a novel bovine astrovirus in a cow with encephalitis. Transbound Emerg Dis 63:253–259CrossRefPubMed

18.

Selimovic-Hamza S, Bouzalas IG, Vandevelde M, Oevermann A, Seuberlich T (2016) Detection of astrovirus in historical cases of european sporadic bovine encephalitis, Switzerland 1958–1976. Front Vet Sci 3:91CrossRefPubMedPubMedCentral

19.

Bosch A, Pinto RM, Guix S (2014) Human astroviruses. Clin Microbiol Rev 27:1048–1074CrossRefPubMedPubMedCentral

20.

Guix S, Bosch A, Pintó R (2013) Astrovirus taxonomy. In: Schultz-Cherry S (ed) Astrovirus research essential ideas, everyday impacts, future directions. Springer, New York, pp 97–118

21.

Woode GN, Bridger JC (1978) Isolation of small viruses resembling astroviruses and caliciviruses from acute enteritis of calves. J Med Microbiol 11:441–452CrossRefPubMed

22.

Tse H, Chan WM, Tsoi HW, Fan RY, Lau CC, Lau SK, Woo PC, Yuen KY (2011) Rediscovery and genomic characterization of bovine astroviruses. J Gen Virol 92:1888–1898CrossRefPubMed

23.

Nagai M, Omatsu T, Aoki H, Otomaru K, Uto T, Koizumi M, Minami-Fukuda F, Takai H, Murakami T, Masuda T, Yamasato H, Shiokawa M, Tsuchiaka S, Naoi Y, Sano K, Okazaki S, Katayama Y, Oba M, Furuya T, Shirai J, Mizutani T (2015) Full genome analysis of bovine astrovirus from fecal samples of cattle in Japan: identification of possible interspecies transmission of bovine astrovirus. Arch Virol 160:2491–2501CrossRefPubMed

24.

Selimovic-Hamza S, Sanchez S, Philibert H, Clark EG, Seuberlich T (2017) Bovine astrovirus infection in feedlot cattle with neurological disease in western Canada. Can Vet J 58:601–603PubMedPubMedCentral

25.

Spinato MT, Vince A, Cai H, Ojkic D (2017) Identification of bovine astrovirus in cases of bovine non-suppurative encephalitis in eastern Canada. Can Vet J 58:607–609PubMedPubMedCentral

26.

Mittelholzer C, Hedlund KO, Englund L, Dietz HH, Svensson L (2003) Molecular characterization of a novel astrovirus associated with disease in mink. J Gen Virol 84:3087–3094CrossRefPubMed

27.

Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876–4882CrossRefPubMedPubMedCentral

28.

Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731–2739CrossRefPubMedPubMedCentral

29.

Lole KS, Bollinger RC, Paranjape RS, Gadkari D, Kulkarni SS, Novak NG, Ingersoll R, Sheppard HW, Ray SC (1999) Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination. J Virol 73:152–160PubMedPubMedCentral

30.

Kono R, Hirata M, Kaji M, Goto Y, Ikeda S, Yanase T, Kato T, Tanaka S, Tsutsui T, Imada T, Yamakawa M (2008) Bovine epizootic encephalomyelitis caused by Akabane virus in southern Japan. BMC Vet Res 13(4):20CrossRef

31.

Katayama T, Saito S, Horiuchi S, Maruta T, Kato T, Yanase T, Yamakawa M, Shirafuji H (2013) Nonsuppurative encephalomyelitis in a calf in Japan and isolation of Japanese encephalitis virus genotype 1 from the affected calf. J Clin Microbiol 51:3448–3453CrossRefPubMedPubMedCentral

32.

Bouzalas IG, Wüthrich D, Selimovic-Hamza S, Drögemüller C, Bruggmann R, Seuberlich T (2016) Full-genome based molecular characterization of encephalitis-associated bovine astroviruses. Infect Genet Evol 44:162–168CrossRefPubMed

33.

Selimovic-Hamza S, Boujon CL, Hilbe M, Oevermann A, Seuberlich T (2017) Frequency and pathological phenotype of bovine astrovirus CH13/NeuroS1 infection in neurologically-diseased cattle: towards assessment of causality. Viruses 9:E12CrossRefPubMed

34.

Deiss R, Selimovic-Hamza S, Seuberlich T, Meylan M (2017) Neurologic clinical signs in cattle with astrovirus-associated encephalitis. J Vet Intern Med 31:1209–1214CrossRefPubMedPubMedCentral

Titel: Whole genome analysis of a novel neurotropic bovine astrovirus detected in a Japanese black steer with non-suppurative encephalomyelitis in Japan
verfasst von: Yoshimasa Hirashima
Daisuke Okada
Shoichi Shibata
Shu Yoshida
Shoichiro Fujisono
Tsutomu Omatsu
Tetsuya Mizutani
Makoto Nagai
Publikationsdatum: 04.06.2018
Verlag: Springer Vienna
Erschienen in: Archives of Virology / Ausgabe 10/2018
Print ISSN: 0304-8608
Elektronische ISSN: 1432-8798
DOI: https://doi.org/10.1007/s00705-018-3898-3

Leitlinien kompakt für die Innere Medizin

Mit medbee Pocketcards sicher entscheiden.

^{Seit 2022 gehört die medbee GmbH zum Springer Medizin Verlag}

Kostenlos registrieren

Neu im Fachgebiet Innere Medizin

24.04.2024 | DGIM 2024 | Kongressbericht | Nachrichten

Update Innere Medizin

Bestellen Sie unseren Fach-Newsletter und bleiben Sie gut informiert.

Newsletter bestellen

Springer Medizin

Whole genome analysis of a novel neurotropic bovine astrovirus detected in a Japanese black steer with non-suppurative encephalomyelitis in Japan

Abstract

Leitlinien kompakt für die Innere Medizin

Neu im Fachgebiet Innere Medizin

Metformin rückt in den Hintergrund

Myokarditis nach Infekt – richtig schwierig wird es bei Profisportlern

Thrombophiliescreening – Wenn, dann richtig und nur bei therapeutischer Konsequenz

Bei Senioren mit Prostatakarzinom auf Anämie achten!

Update Innere Medizin

Springer Medizin

Abstract

Bitte loggen Sie sich ein, um Zugang zu diesem Inhalt zu erhalten

Weitere Artikel der Ausgabe 10/2018

Gomphocarpus mosaic virus, a distinctive member of the genus Potyvirus

Hepatitis C virus serologic relapse after treatment with direct-acting antivirals is dependent on viral RNA levels in peripheral blood mononuclear cells and the grade of liver cirrhosis

Clinical evaluation of a panel of multiplex quantitative real-time reverse transcription polymerase chain reaction assays for the detection of 16 respiratory viruses associated with community-acquired pneumonia

Complete genome sequence and phylogenetic analysis of spring viremia of carp virus isolated from leather carp (Cyprinus carpio nudus) in Korea in 2016

A novel polyomavirus in sigmodontine rodents from São Paulo State, Brazil

Detection and genomic characterization of new avian-like hepatitis E virus in a sparrow in the United States

Leitlinien kompakt für die Innere Medizin

Neu im Fachgebiet Innere Medizin

Metformin rückt in den Hintergrund

Myokarditis nach Infekt – richtig schwierig wird es bei Profisportlern

Thrombophiliescreening – Wenn, dann richtig und nur bei therapeutischer Konsequenz

Bei Senioren mit Prostatakarzinom auf Anämie achten!

Update Innere Medizin