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Gene Editing for Corneal Stromal Regeneration

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Corneal Regeneration

Part of the book series: Methods in Molecular Biology ((MIMB,volume 2145))

Abstract

CRISPR/Cas9 gene editing holds the promise of sequence-specific alteration of the genome to achieve therapeutic benefit in the treated tissue. Cas9 is an RNA-guided nuclease in which the sequence of the RNA can be altered to match the desired target. However, care must be taken in target choice and RNA guide design to ensure both maximum on-target and minimum off-target activity. The cornea is an ideal tissue for gene therapy due to its small surface area, accessibility, immune privilege, avascularity, and ease of visualization. Herein, we describe the design, testing, and delivery of Cas9 and guide RNAs to target genes expressed in the cornea.

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References

  1. Jinek M, Chylinski K, Fonfara I, Hauer M, Doudna JA, Charpentier E (2012) A programmable dual-rna-guided DNA endonuclease in adaptive bacterial immunity. Science (New York, NY) 337(6096):816–821. https://doi.org/10.1126/science.1225829

    Article  CAS  Google Scholar 

  2. Mali P, Yang L, Esvelt KM, Aach J, Guell M, DiCarlo JE, Norville JE, Church GM (2013) Rna-guided human genome engineering via cas9. Science (New York, NY) 339(6121):823–826. https://doi.org/10.1126/science.1232033

    Article  CAS  Google Scholar 

  3. Cong L, Ran FA, Cox D, Lin S, Barretto R, Habib N, Hsu PD, Wu X, Jiang W, Marraffini LA, Zhang F (2013) Multiplex genome engineering using crispr/cas systems. Science (New York, NY) 339(6121):819–823. https://doi.org/10.1126/science.1231143

    Article  CAS  Google Scholar 

  4. Ran FA, Hsu PD, Wright J, Agarwala V, Scott DA, Zhang F (2013) Genome engineering using the crispr-cas9 system. Nat Protoc 8(11):2281–2308. https://doi.org/10.1038/nprot.2013.143

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  5. Hsu PD, Scott DA, Weinstein JA, Ran FA, Konermann S, Agarwala V, Li Y, Fine EJ, Wu X, Shalem O, Cradick TJ, Marraffini LA, Bao G, Zhang F (2013) DNA targeting specificity of rna-guided cas9 nucleases. Nat Biotechnol 31(9):827–832. https://doi.org/10.1038/nbt.2647

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  6. Fu Y, Foden JA, Khayter C, Maeder ML, Reyon D, Joung JK, Sander JD (2013) High-frequency off-target mutagenesis induced by crispr-cas nucleases in human cells. Nat Biotechnol 31(9):822–826. https://doi.org/10.1038/nbt.2623

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  7. Moore CBT, Christie KA, Marshall J, Nesbit MA (2018) Personalised genome editing - the future for corneal dystrophies. Prog Retin Eye Res 65:147–165. https://doi.org/10.1016/j.preteyeres.2018.01.004

    Article  CAS  PubMed  Google Scholar 

  8. Christie KA, Courtney DG, DeDionisio LA, Shern CC, De Majumdar S, Mairs LC, Nesbit MA, Moore CBT (2017) Towards personalised allele-specific crispr gene editing to treat autosomal dominant disorders. Sci Rep 7(1):16174. https://doi.org/10.1038/s41598-017-16279-4

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  9. Courtney DG, Moore JE, Atkinson SD, Maurizi E, Allen EH, Pedrioli DM, McLean WH, Nesbit MA, Moore CB (2016) Crispr/cas9 DNA cleavage at snp-derived pam enables both in vitro and in vivo krt12 mutation-specific targeting. Gene Ther 23(1):108–112. https://doi.org/10.1038/gt.2015.82

    Article  CAS  PubMed  Google Scholar 

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Correspondence to Tara Moore .

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Moore, T., Chao-Shern, C., DeDionisio, L., Christie, K.A., Nesbit, M.A. (2020). Gene Editing for Corneal Stromal Regeneration. In: Ahearne, M. (eds) Corneal Regeneration. Methods in Molecular Biology, vol 2145. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-0599-8_6

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  • DOI: https://doi.org/10.1007/978-1-0716-0599-8_6

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  • Publisher Name: Humana, New York, NY

  • Print ISBN: 978-1-0716-0598-1

  • Online ISBN: 978-1-0716-0599-8

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