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Identification of serum biomarkers associated with hepatitis B virus-related hepatocellular carcinoma and liver cirrhosis using mass-spectrometry-based metabolomics

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Abstract

Hepatitis B virus (HBV) infection is a major risk factor for deaths from liver cirrhosis and hepatocellular carcinoma (HCC). With a long-term goal of improving early diagnosis, we aimed to identify specific biomarkers associated with the development of HCC and liver cirrhosis in patients with HBV infection. Serum samples from 46 HBV infected patients with HCC and liver cirrhosis and 24 age–gender matched healthy subjects were profiled by liquid chromatography–mass spectrometry and gas chromatography–mass spectrometry. It was found that fatty acids and long-chain acylcarnitines were significantly elevated in HBV-related HCC patients, whereas most of the carbohydrates, amino acids, short- and medium-chain acylcarnitines, and glycerophospholipids were decreased, when compared to healthy subjects. The up-regulation of fatty acids and long-chain acylcarnitines in HCC was positively correlated with liver cirrhosis state. Logistic regression analysis indicated that palmitoylcarnitine together with arginine was an effective “combined marker” for diagnosing HBV-related HCC with 97.3 % sensitivity and 100 % specificity. Linoleic acid plus glucose was useful for discrimination of liver cirrhosis in HCC patients with 79.2 % sensitivity and 75 % specificity. These findings demonstrate that mass-spectrometry-based metabolomics is a promising tool that could provide special insights into tumor metabolism and identify novel biomarkers for detection of HCC and liver cirrhosis from HBV infected patients.

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References

  • Baniasadi, H., Gowda, G. A., Gu, H., et al. (2013). Targeted metabolic profiling of hepatocellular carcinoma and hepatitis C using LC-MS/MS. Electrophoresis, 34, 2910–2917.

    CAS  PubMed  Google Scholar 

  • Beyoglu, D., Imbeaud, S., Maurhofer, O., et al. (2013). Tissue metabolomics of hepatocellular carcinoma: tumor energy metabolism and the role of transcriptomic classification. Hepatology, 58, 229–238.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Chaneton, B., Hillmann, P., Zheng, L., et al. (2012). Serine is a natural ligand and allosteric activator of pyruvate kinase M2. Nature, 491, 458–462.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Chen, T., Xie, G., Wang, X., et al. (2011). Serum and urine metabolite profiling reveals potential biomarkers of human hepatocellular carcinoma. Molecular and Cellular Proteomics, 10(M110), 004945.

    PubMed  Google Scholar 

  • Chi, H. C., Chen, C. Y., Tsai, M. M., Tsai, C. Y., & Lin, K. H. (2013). Molecular functions of thyroid hormones and their clinical significance in liver-related diseases. Biomed Research International, 601361.

  • Davis, G. L., Dempster, J., Meler, J. D., et al. (2008). Hepatocellular carcinoma: management of an increasingly common problem. Proc (Bayl Univ Med Cent), 21, 266–280.

    Google Scholar 

  • Denkert, C., Budczies, J., Kind, T., et al. (2006). Mass spectrometry-based metabolic profiling reveals different metabolite patterns in invasive ovarian carcinomas and ovarian borderline tumors. Cancer Research, 66, 10795–10804.

    Article  CAS  PubMed  Google Scholar 

  • El-Serag, H. B. (2011). Hepatocellular Carcinoma. New England Journal of Medicine, 365, 1118–1127.

    Article  CAS  PubMed  Google Scholar 

  • Gao, Y. H., Lu, Y. H., Huang, S. M., et al. (2014). Identifying early urinary metabolic changes with long-term environmental exposure to cadmium by mass-spectrometry-based metabolomics. Environmental Science and Technology, 48, 6409–6418.

    Article  CAS  PubMed  Google Scholar 

  • Gao, H., Lu, Q., Liu, X., et al. (2009). Application of 1H NMR-based metabonomics in the study of metabolic profiling of human hepatocellular carcinoma and liver cirrhosis. Cancer Science, 100, 782–785.

    Article  CAS  PubMed  Google Scholar 

  • Gatenby, R. A., & Gillies, R. J. (2004). Why do cancers have high aerobic glycolysis? Nature Reviews Cancer, 4, 891–899.

    Article  CAS  PubMed  Google Scholar 

  • Halket, J. M., Waterman, D., Przyborowska, A. M., et al. (2005). Chemical derivatization and mass spectral libraries in metabolic profiling by GC/MS and LC/MS/MS. Journal of Experimental Botany, 56, 219–243.

    Article  CAS  PubMed  Google Scholar 

  • Jemal, A., Bray, F., Center, M. M., et al. (2011). Global cancer statistics. CA: A Cancer Journal for Clinicians, 61, 69–90.

    Google Scholar 

  • Lai, H. S., Lee, J. C., Lee, P. H., Wang, S. T., & Chen, W. J. (2005). Plasma free amino acid profile in cancer patients. Seminars in Cancer Biology, 15, 267–276.

    Article  CAS  PubMed  Google Scholar 

  • Li, Y. H., Liu, Y., Li, Y. D., et al. (2012). GABA stimulates human hepatocellular carcinoma growth through overexpressed GABAA receptor theta subunit. World Journal of Gastroenterology, 18, 2704–2711.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Liu, Y., Hong, Z. Y., Tan, G. G., et al. (2014). NMR and LC/MS-based global metabolomics to identify serum biomarkers differentiating hepatocellular carcinoma from liver cirrhosis. International Journal of Cancer, 135, 658–668.

    Article  CAS  PubMed  Google Scholar 

  • Liu, Y., Li, Y. H., Guo, F. J., et al. (2008). Gamma-aminobutyric acid promotes human hepatocellular carcinoma growth through overexpressed gamma-aminobutyric acid A receptor alpha 3 subunit. World Journal of Gastroenterology, 14, 7175–7182.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Liu, S. Y., Zhang, R. L., Kang, H., Fan, Z. J., & Du, Z. (2013). Human liver tissue metabolic profiling research on hepatitis B virus-related hepatocellular carcinoma. World Journal of Gastroenterology, 19, 3423–3432.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Lu, Y. H., Lam, H. M., Pi, E. X., et al. (2013). Comparative metabolomics in Glycine max and Glycine soja under salt stress to reveal the phenotypes of their offspring. Journal of Agricultural and Food Chemistry, 61, 8711–8721.

    Article  CAS  PubMed  Google Scholar 

  • Matsumura, K., Opiekun, M., Oka, H., et al. (2010). Urinary volatile compounds as biomarkers for lung cancer: A proof of principle study using odor signatures in mouse models of lung cancer. PLoS One, 5.

  • Moco, S., Bino, R. J., De Vos, R. C. H., & Vervoort, J. (2007). Metabolomics technologies and metabolite identification. Trac-Trends in Analytical Chemistry, 26, 855–866.

    Article  CAS  Google Scholar 

  • Nicholson, J. K., & Lindon, J. C. (2008). Systems biology: Metabonomics. Nature, 455, 1054–1056.

    Article  CAS  PubMed  Google Scholar 

  • Nyblom, H., Bjornsson, E., Simren, M., et al. (2006). The AST/ALT ratio as an indicator of cirrhosis in patients with PBC. Liver International, 26, 840–845.

    Article  CAS  PubMed  Google Scholar 

  • Onodera, H., Ukai, K., & Minami, Y. (1995). Hepatocellular carcinoma cases with five-year survival and prognostic factors affecting the survival time. The Tohoku Journal of Experimental Medicine, 176, 203–211.

    Article  CAS  PubMed  Google Scholar 

  • Patterson, A. D., Maurhofer, O., Beyoglu, D., et al. (2011). Aberrant lipid metabolism in hepatocellular carcinoma revealed by plasma metabolomics and lipid profiling. Cancer Research, 71, 6590–6600.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Ressom, H. W., Xiao, J. F., Tuli, L., et al. (2012). Utilization of metabolomics to identify serum biomarkers for hepatocellular carcinoma in patients with liver cirrhosis. Analytica Chimica Acta, 743, 90–100.

    Article  CAS  PubMed  Google Scholar 

  • Santos, C. R., & Schulze, A. (2012). Lipid metabolism in cancer. FEBS Journal, 279, 2610–2623.

    Article  CAS  PubMed  Google Scholar 

  • Shariff, M. I. F., Gomaa, A. I., Cox, I. J., et al. (2011). Urinary metabolic biomarkers of hepatocellular carcinoma in an Egyptian population: a validation study. Journal of Proteome Research, 10, 1828–1836.

    Article  CAS  PubMed  Google Scholar 

  • Shariff, M. I. F., Ladep, N. G., Cox, I. J., et al. (2010). Characterization of urinary biomarkers of hepatocellular carcinoma using magnetic resonance spectroscopy in a Nigerian population. Journal of Proteome Research, 9, 1096–1103.

    Article  CAS  PubMed  Google Scholar 

  • Sharma, S., & Black, S. M. (2009). Carnitine homeostasis, mitochondrial function and cardiovascular disease. Drug Discovery Today: Disease Mechanisms, 6, e31–e39.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Shen, Q. J., Fan, J., Yang, X. R., et al. (2012). Serum DKK1 as a protein biomarker for the diagnosis of hepatocellular carcinoma: a large-scale, multicentre study. Lancet Oncology, 13, 817–826.

    Article  CAS  PubMed  Google Scholar 

  • Simonetti, R. G., Camma, C., Fiorello, F., et al. (1991). Hepatocellular carcinoma. A worldwide problem and the major risk factors. Digestive Diseases and Sciences, 36, 962–972.

    Article  CAS  PubMed  Google Scholar 

  • Sreekumar, A., Poisson, L. M., Rajendiran, T. M., et al. (2009). Metabolomic profiles delineate potential role for sarcosine in prostate cancer progression. Nature, 457, 910–914.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Takehara, A., Hosokawa, M., Eguchi, H., et al. (2007). Gamma-aminobutyric acid (GABA) stimulates pancreatic cancer growth through overexpressing GABAA receptor pi subunit. Cancer Research, 67, 9704–9712.

    Article  CAS  PubMed  Google Scholar 

  • Tan, B. B., Qiu, Y. P., Zou, X., et al. (2013). Metabonomics identifies serum metabolite markers of colorectal cancer. Journal of Proteome Research, 12, 3000–3009.

    Article  CAS  PubMed  Google Scholar 

  • Veenstra, T. D. (2012). Metabolomics: The final frontier? Genome Medicine, 4, 40.

    Article  PubMed  PubMed Central  Google Scholar 

  • Wang, X. J., Zhang, A. H., & Sun, H. (2013). Power of metabolomics in diagnosis and biomarker discovery of hepatocellular carcinoma. Hepatology, 57, 2072–2077.

    Article  CAS  PubMed  Google Scholar 

  • Wen, T., Gao, L., Wen, Z. M., et al. (2013). Exploratory investigation of plasma metabolomics in human lung adenocarcinoma. Molecular BioSystems, 9, 2370–2378.

    Article  CAS  PubMed  Google Scholar 

  • Xiao, J. F., Varghese, R. S., Zhou, B., et al. (2012). LC-MS based serum metabolomics for identification of hepatocellular carcinoma biomarkers in Egyptian cohort. Journal of Proteome Research, 11, 5914–5923.

    CAS  PubMed  PubMed Central  Google Scholar 

  • Yin, P. Y., Wan, D. F., Zhao, C. X., et al. (2009). A metabonomic study of hepatitis B-induced liver cirrhosis and hepatocellular carcinoma by using RP-LC and HILIC coupled with mass spectrometry. Molecular BioSystems, 5, 868–876.

    Article  CAS  PubMed  Google Scholar 

  • Zeng, J., Yin, P., Tan, Y., et al. (2014). Metabolomics study of hepatocellular carcinoma: discovery and validation of serum potential biomarkers by using capillary electrophoresis-mass spectrometry. Journal of Proteome Research, 13, 3420–3431.

    Article  CAS  PubMed  Google Scholar 

  • Zhang, T., Wu, X. Y., Ke, C. F., et al. (2013). Identification of potential biomarkers for ovarian cancer by urinary metabolomic profiling. Journal of Proteome Research, 12, 505–512.

    Article  CAS  PubMed  Google Scholar 

  • Zhou, L., Ding, L., Yin, P., et al. (2012a). Serum metabolic profiling study of hepatocellular carcinoma infected with hepatitis B or hepatitis C virus by using liquid chromatography-mass spectrometry. Journal of Proteome Research, 11, 5433–5442.

    Article  CAS  PubMed  Google Scholar 

  • Zhou, M., McDonald, J. F., & Fernandez, F. M. (2010). Optimization of a direct analysis in real time/time-of-flight mass spectrometry method for rapid serum metabolomic fingerprinting. Journal of the American Society for Mass Spectrometry, 21, 68–75.

    Article  PubMed  Google Scholar 

  • Zhou, L., Wang, Q., Yin, P., et al. (2012b). Serum metabolomics reveals the deregulation of fatty acids metabolism in hepatocellular carcinoma and chronic liver diseases. Analytical and Bioanalytical Chemistry, 403, 203–213.

    Article  CAS  PubMed  Google Scholar 

  • Zhu, J. J., Djukovic, D., Deng, L. L., et al. (2014). Colorectal cancer detection using targeted serum metabolic profiling. Journal of Proteome Research, 13, 4120–4130.

    Article  CAS  PubMed  Google Scholar 

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Acknowledgments

This study was supported in part by the grant of Natural Science Fund of The Science and Technology Commission of Shanghai, China (No. 12ZR1404300), Singapore Medical Research Council (No. NMRC/1242/2009), the NUS secondment Funds to CNO and the NUS Environmental Research Institute (NERI).

Conflict of Interest

All authors declare that they have no conflict of interest.

Informed Consent

Informed consent was obtained from all individual participants included in the study. All participants voluntarily joined this study, gave written informed consent, and completed a questionnaire that provided demographical information including age, gender, lifestyle factors, and medical family history.

Compliance with Ethical Requirements

All procedures performed in the study involving human participants were in accordance with the ethical standards of the institutional and/or national research committee and with the 1964 Helsinki declaration and its later amendments or comparable ethical standards. The study protocol was approved by the Ethics Committees of Shanghai Huashan Hospital and National University of Singapore.

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Correspondence to Mingquan Chen or Choon Nam Ong.

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Yonghai Lu and Chong Huang have contributed equally to this work.

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Lu, Y., Huang, C., Gao, L. et al. Identification of serum biomarkers associated with hepatitis B virus-related hepatocellular carcinoma and liver cirrhosis using mass-spectrometry-based metabolomics. Metabolomics 11, 1526–1538 (2015). https://doi.org/10.1007/s11306-015-0804-9

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