Abstract
Met, the tyrosine kinase receptor for hepatocyte growth factor (HGF), mainly activates prosurvival pathways, including protection from apoptosis. In this work, we investigated the cardioprotective mechanisms of Met activation by agonist monoclonal antibodies (mAbs). Cobalt chloride (CoCl2), a chemical mimetic of hypoxia, was used to induce cardiac damage in H9c2 cardiomyoblasts, which resulted in reduction of cell viability by (i) caspase-dependent apoptosis and (ii) – surprisingly – autophagy. Blocking either apoptosis with the caspase inhibitor benzyloxycarbonyl-VAD-fluoromethylketone or autophagosome formation with 3-methyladenine prevented loss of cell viability, which suggests that both processes contribute to cardiomyoblast injury. Concomitant treatment with Met-activating antibodies or HGF prevented apoptosis and autophagy. Pro-autophagic Redd1, Bnip3 and phospho-AMPK proteins, which are known to promote autophagy through inactivation of the mTOR pathway, were induced by CoCl2. Mechanistically, Met agonist antibodies or HGF prevented the inhibition of mTOR and reduced the flux of autophagosome formation. Accordingly, their anti-autophagic function was completely blunted by Temsirolimus, a specific mTOR inhibitor. Targeted Met activation was successful also in the setting of low oxygen conditions, in which Met agonist antibodies or HGF demonstrated anti-apoptotic and anti-autophagic effects. Activation of the Met pathway is thus a promising novel therapeutic tool for ischaemic injury.
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Main
Hypoxia is critical in many pathological conditions including myocardial ischaemia.1 Cells respond to hypoxia by activation of the hypoxia-inducible factor HIF-1α, a transcription factor that modulates the expression of genes involved in angiogenesis, survival, metabolism and cell migration.2, 3, 4 In the normoxic state the HIF-1α protein is hydroxylated, ubiquitinated and degraded in the proteasome.1 In the hypoxic state the activity of specific hydroxylases is quenched and HIF-1α is stabilized.5 It is known that cobalt, a transition metal, mimics hypoxia by causing inactivation of hydroxylase enzymes and stabilization of HIF-1α.6
Although the acute hypoxic response enhances cell survival and promotes adaptation to low oxygen environment, chronic or extreme hypoxic conditions initiate cell death program(s), among which apoptosis is the best known.7 Apoptosis is governed by a series of specialized proteins, functionally divided into pro-apoptotic (Bax) and anti-apoptotic (Bcl-2) molecules.8 Autophagy – that is, degradation of damaged proteins and intracellular organelles – is a less renowned regulator of cell viability.9 In the initial phase of stress conditions, autophagy exerts a protective function for cell survival.10 Chronic activation of autophagy – on the contrary – results in enhanced cell death, through mechanism(s) that are not fully understood.11
Cardiomyocytes are sensitive to survival factors such as hepatocyte growth factor (HGF).12 The biological functions of HGF are mediated by a specific tyrosine kinase receptor, encoded by the MET proto-oncogene and by activation of multiple intracellular downstream signalling pathways.13 The HGF/Met axis is normally silent in terminally differentiated cardiomyocytes; however, it is induced and activated when the organ undergoes injury, including ischaemia.12, 14 Moreover, it is known that Met is an inducible gene and that the promoter is activated by five Hypoxia Response Elements sensitive to HIF-1α.4 It has been proposed that HGF may be cardioprotective, attenuating ischaemia/reperfusion injury.15 Agonist monoclonal antibodies (mAbs) directed against the cell surface Met receptor stimulate receptor homodimerization, autophosphorylation and consequently kinase activation through their divalent nature.16, 17 In the present study, we show that such antibodies vicariate HGF in protecting cardiac muscle cells from hypoxic injury. Unexpectedly, their prosurvival role is mediated not only by the known anti-apoptotic activity but by protection from autophagic damage as well.
Results
Met agonist antibodies stimulate receptor phosphorylation, downstream signalling and biological response in cardiomyoblasts
To assess the role of Met in cardiac protection from hypoxia injury, we studied the H9c2 rat cardiomyoblasts. These cells express cardiac markers Connexin43 and Troponin-I (Supplementary Figure S1a). First, we demonstrated using flow cytometry that the endogenous Met receptor is present at the cell surface (Figure 1a). Moreover, immunofluorescence (IF) analysis showed that Met is localized both at the plasma membrane and intracellularly (Supplementary Figure S1b). Second, we stimulated the Met tyrosine kinase activity by using the HGF ligand or two mAbs, DN30 and DO24, which we previously showed to be partial and full agonist of the Met receptor, respectively.16 All three Met agonists induced phosphorylation of Met (Figure 1b), activation of its principal effector Gab1 (Figure 1b) and stimulation of the main signalling pathways downstream Met (that is, Akt, Erk and mTOR, data not shown). In a classical ‘wound-healing’ assay, treatment with either mAb induced cells to migrate and to cover the wounded area at an extent similar to that induced by HGF (Figure 1c). As a control, treatment with an irrelevant (anti-VSV-G) antibody had no effect on cell migration (Supplementary Figure S2a).
CoCl2 induces cardiomyoblast apoptosis
CoCl2 mimics the hypoxic/ischaemic condition and is a simple and validated in vitro tool to study the molecular mechanisms driven by hypoxia.18 Indeed, after CoCl2 treatment, HIF-1α protein expression significantly increased, starting from 3 h (Supplementary Figure S3a), whereas mRNA level was super-induced at later time (starting from 12 h; Supplementary Figure S3b). To further assess the involvement of HIF-1α in CoCl2 response, we analysed the expression of known typical HIF-1α target genes, such as Glut1, CAXII, GAPDH and Met itself.4, 19, 20, 21 In time course experiments, a significant increase in mRNA levels was observed at 3 h for Glut1 and at 12 h for CAXII and Met (Supplementary Figure S3c–e). Induction of GAPDH protein was detected at 24 h (Supplementary Figure S3f). To investigate the CoCl2 effect on cell viability, we performed the 3-(4,5-dimethyl-2-thiazolyl)-2,5-diphenyl-2H-tetrazolium bromide (MTT) assay. Cardiomyoblasts treated with CoCl2 showed a significant reduction in cell survival in a dose- and time-dependent manner (Figures 2a and b). Moreover, CoCl2 decreased prosurvival pathways (that is, Akt, Erk and mTOR), which are stimulated by HGF-activated Met receptor (Supplementary Figure S4). Consistently, CoCl2 treatment significantly impaired the signalling response to HGF survival factor (Supplementary Figure S4). As it is known that hypoxia produces cell death through mitochondrial membrane permeabilization,22 we analysed the apoptotic response. We found that treatment with CoCl2 leads to a significant increase in the number of pyknotic nuclei, as compared with untreated cells (Figure 2c); this apoptotic event was mediated by the caspase-dependent pathway of cell death, as it was affected by the specific inhibitor zVAD (Figure 2d). We also analysed the ratio between Bax and Bcl-2 protein levels, known to be crucial in caspase-mediated apoptosis. The treatment with CoCl2 increased the pro-apoptotic Bax and decreased the anti-apoptotic Bcl-2 at early (12 h) and late (48 h) time points, resulting in a significant enhancement of Bax/Bcl-2 ratio (Figure 2e). Consistent with the activation of the canonical mitochondrial pathway of apoptosis, the ratio between the cleaved and the total caspase-3 protein was significantly raised in cells treated for 48 h (Figure 2f). Finally, the ratio between cleaved and uncleaved PARP, one of the substrates of caspase-3, significantly increased at 72 and 96 h (Figure 2g).
Met agonist antibodies protect from CoCl2-induced apoptosis
To restore the prosurvival signalling and protect cardiomyoblasts from apoptosis, we concomitantly treated cells with CoCl2 and Met agonist antibodies or HGF. Met stimulation by either mAb or HGF fully prevented the loss of cell viability in the MTT assay (Figure 3a). The PHA-665752 (PHA), a specific inhibitor of the Met kinase, abolished the prosurvival activity of Met agonist antibodies and HGF; thus, protection was mediated specifically by the Met receptor (Figure 3a). We also demonstrated that the two mAbs, as well as HGF, protected from CoCl2-induced reduction of cell number (Figure 3b). As a control the treatment with anti-VSV-G antibody did not produce any effect (Supplementary Figure S2b and c). Importantly, DN30, DO24 and HGF prevented the CoCl2-induced rise in the number of pyknotic nuclei (Figure 3c). Accordingly, all above Met agonists prevented caspase-3 activation induced by CoCl2 (Figure 3d).
CoCl2 induces autophagy contributing to cardiomyoblast death
In our experiments, the apoptosis inhibitor zVAD failed to fully inhibit cell death (Figure 2d). This observation suggested that the caspase-dependent apoptosis only partially contributes to the loss of cell viability induced by CoCl2. It has been reported that prolonged stimulation of the HIF-1α pathway produces excess autophagy, which may also result in cell death.23 Thus, we evaluated the induction of pro-autophagic mechanisms in cells treated for different lengths of time with CoCl2. We performed an mRNA expression analysis of Redd1 and Bnip3, known transcriptional targets of HIF-1α,24, 25 which promote autophagy by inhibition of mTOR.26, 27 Both genes were significantly induced by CoCl2 treatment starting from 12 h and were maintained at high levels for 48 h (Figures 4a and b). Redd1 and Bnip3 protein levels were also increased in presence of CoCl2 (Figures 4c and d). Another HIF-1α-dependent mechanism of autophagy induction is mediated by AMPK phosphorylation and activation.28 We found that CoCl2 treatment induced a significant increase in AMPK phosphorylation, relative to untreated cells (Figure 4e). It is known that P-AMPK is also an inhibitory molecule of the mTOR pathway;29 thus, we analysed the phosporylation state of p70S6K and 4EBP1, the two main substrates of mTOR. Phosphorylation levels of both proteins were significantly decreased in a time-dependent manner by CoCl2 treatment, starting from 24 h (Figures 4f and g). This result indicates that CoCl2 treatment induces the inhibition of the mTOR pathway. As negative regulation of mTOR signalling promotes autophagy30 we analysed some key proteins of different phases of autophagosome formation. Autophagy is positively regulated by Beclin-1, which binds the class III PI3K Vps34, thereby facilitating autophagosome formation.31 Another phase of autophagy is the elongation of the autophagosome, with generation of the lipidated form of LC3 called LC3II.32 Finally, p62/SQSTM1 protein is an important marker of the autophagic machinery, as it recognizes ubiquitin and determines the cargo of ubiquitinated substrates in the autophagic–lysosomal pathway.33 Accordingly, we observed that both Beclin-1 and p62 protein levels were induced in CoCl2-treated cells (Figures 5a and c) and that LC3 was processed from the inactive (LC3I) to the active form (LC3II, Figure 5b) in a time-dependent manner. In addition, the mRNAs of these autophagic proteins were induced in the presence of CoCl2 for 48 h (Figure 5d). Moreover, IF analysis revealed that CoCl2 induced LC3 puncta formation, proof of autophagosome maturation (Supplementary Figure S5A and B). Finally, we asked whether increased autophagic response could participate into the CoCl2-induced loss of cell viability. We co-treated cardiomyoblasts with CoCl2 and 3-Methyladenine (3-MA), a selective inhibitor of the autophagic initiator PI3K type III. The inhibitor decreased the LC3 puncta formation (Supplementary Figure S5B and C) and, importantly, prevented the loss of cell viability and recovered as much as 80% of the basal value (Figure 5e). This last result indicates that, besides apoptosis, the autophagic process is involved in cell death induced by CoCl2. The increase in pro-autophagic proteins by hypoxic injury may be due to either enhanced formation or reduced degradation of autophagosomes. Treatment with bafilomycin A1 (Baf), an inhibitor of the vacuolar H+ ATPase of lysosomes,34 significantly increased the LC3II/LC3I ratio (Figure 5f), indicating a block on the basal lysosomal-dependent degradation of the autophagosome cargo. H9c2 cells concomitantly treated with CoCl2 and Baf showed LC3II/LC3I protein levels and LC3 immunofluorescent puncta significantly higher than those observed in cells treated with CoCl2 alone (Figure 5f and Supplementary Figure S5B and D). Altogether, these data suggest that CoCl2-induced death results from enhanced flux of autophagosome formation rather than from reduced clearance.
Met agonist antibodies protect from CoCl2-induced autophagy through the mTOR pathway
Treatment with DN30, DO24 or HGF prevented the increase of both LC3II/LC3I ratio and p62 protein levels (Figures 6a and b). These results demonstrate that Met agonists inhibit the autophagy induced by CoCl2. To investigate the effect of HGF stimulation on the autophagic flux we again used the Baf inhibitor. In cell cultures exposed to Baf or Baf+CoCl2, the addition of HGF resulted in a significantly lower LC3II/LC3I ratio as compared with the corresponding treatment in the absence of the cytokine (Figure 6c). Lysosomal proteolysis was completely blocked by Baf; thus, an LC3II decrease below the Baf-induced levels indicates that HGF reduces the flux of autophagosome formation. The two Met agonist antibodies also decreased the LC3II/LC3I ratio in cells cultured in the presence of CoCl2 and Baf (Figure 6d). To identify the protective signalling involved in Met agonist action, we blocked the mTOR pathway known to be the main inhibitor of autophagy. In the presence of temsirolimus, a specific inhibitor of the mTOR complex, the Met agonist-mediated recovery of cell viability upon hypoxic injury was abrogated (Figure 7a). The level of mTOR activation in cultures exposed to CoCl2 in combination with Met agonists was higher than in cells treated with CoCl2 alone (Figures 7b and c). In contrast, the Met agonist antibodies- or HGF-mediated mTOR activation was completely blunted by temsirolimus (Figures 7b and c). Accordingly, the Met agonist-mediated recovery of LC3II/LC3I ratio from CoCl2-induced autophagy was reduced by mTOR pathway inhibition (Figure 7d). Altogether, these results indicate that mTOR activation has a key role in the Met-stimulated protection from autophagy.
Met agonist antibodies attenuate apoptosis and autophagy under hypoxic conditions
The cardioprotective action of the two Met agonist antibodies as well as HGF was evaluated under hypoxic environment at 1% of oxygen tension (Figure 8). First, we showed that hypoxic treatment produced reduction of cell viability (Figure 8a), increase of pycnotic nuclei (Figure 8b) and induction of pro-autophagic proteins Redd1 and Bnip3 (Figure 8c). Next, we demonstrated that Met stimulation by the two mAbs as well as HGF under hypoxic conditions ameliorates cell viability (Figure 8d), reduces the number of pyknotic nuclei (Figure 8e) and decreases the level of autophagic ratio LC3II/LC3I and p62 (Figure 8f). In conclusion, these results show that Met agonists have anti-apoptotic and anti-autophagic effects also in low oxygen tension conditions.
Discussion
The effect of hypoxia in cardiomyocytes relies on duration and intensity of hypoxic stimulus. Short-term induction of HIF-1α is beneficial, as the injured myocardium metabolically adapts to hypoxic condition.35 In contrast, long-term stabilization of HIF-1α may be detrimental.35, 36, 37, 38 Accordingly, we found that sustained hypoxic injury is followed by cardiomyoblast grief.
It is known that HIF-1α stabilization sensitizes tumour and neuronal cells to programmed cell death.39, 22 The mechanisms at the basis of HIF-1α apoptotic effect are not yet well understood but presumably involve Bnip3,40 p5341 and increased production of ROS.42 All these processes converge on the activation of the intrinsic pathway of apoptosis. We found that treatment with CoCl2 induced a significant rise of pyknotic nuclei with concomitant increase in the Bax/Bcl-2 ratio followed by activation of caspase-3 cleavage. Blocking caspases through a chemical inhibitor significantly improved cell viability, validating the apoptotic pathway as a relevant factor in the CoCl2 hypoxic mimicking model.
Here we show that CoCl2-induced hypoxia – besides apoptosis – is also a strong inducer of autophagy. In fact, chemical hypoxia increases known markers of the autophagic–lysosomal pathway: Beclin-1 (an indicator of autophagy induction), conversion of LC3I to lipidated LC3II (an index of autophagosome abundance) and p62 (a marker of ubiquitinated substrate sequestration and degradation).31, 32, 33 Moreover, cell death induced by CoCl2 was blocked by 3-MA, an inhibitor of the class III PI3K Vps34, a canonical initiator of autophagy. The latter experiment indicates that autophagy causes uncontrolled ‘self-cannibalism’ in cardiomyoblasts and contributes to cell death. We also enlightened the cross-talk between apoptotic and autophagic pathways, as CoCl2 decreases Bcl-2 and concomitantly induces Bnip3 and Beclin-1, known triggers of autophagy. In fact, it is reported in the literature that Beclin-1 is inhibited by Bcl-243 and, in turn, Bcl-2 is associated with and inhibited by Bnip3.44
The main regulator of autophagy is mTOR, a potent sensor and integrator of signals stimulated by growth factors, nutrients and energy status. Under conditions of nutrient availability and normoxia, mTOR is active and phosphorylates ATG13, preventing its association with ULK and formation of the autophagosome.45 We found that both CoCl2 and real hypoxia promote upregulation of Bnip3 and Redd1, two different hypoxia-inducible target genes. It is known from the literature that these two proteins inhibit Rheb, a Ras-related small GTPase, and, as a consequence, lead to a negative regulation of mTOR. Bnip3 directly binds and inhibits Rheb,27 while Redd1 acts through a not-yet-defined mechanism involving TSC1/2, an inhibitor of Rheb.26 We also demonstrated that CoCl2 induces phosphorylation and activation of AMPK, another negative regulator of mTOR.29
HGF has been proposed as a cardioprotective factor.12, 46, 47, 48, 49, 50 Patient administration of biologically active HGF may however be difficult as it is a large molecule containing a heparin-binding domain sequestered by low affinity–high avidity sites widespread among the extracellular matrix proteoglycans.51, 52 Moreover, HGF is produced as an inactive precursor that has to be activated after cleavage by specific convertases.53 Compared with the natural HGF ligand, the mAbs have a major advantage of being easier to be produced and more manageable for the therapeutic formulation. For agonist antibodies, their divalent nature is a benefit as they dimerize and activate the receptors. This property has been scrutinized in detail in the case of anti-Met antibodies in the effort of generating monovalent fully inhibitory Fabs, successfully employed in preclinical cancer therapy.17
Here we show that either HGF or the Met agonist antibodies DN30 and DO24 protect from caspase-dependent apoptosis as well as autophagy. The protection from autophagy is mediated by activation of mTOR. Consistently, the increase in phospho-p70S6K and phospho-4EBP1 levels and the inhibition of autophagic LC3 lipidation were abrogated by the mTOR inhibitor. It is likely that activation of mTOR is triggered by the PI3K/Akt pathway at different levels, such as the regulation of mTOR/Raptor complex or phosphorylation of TSC2.54, 55 In addition, Erk inhibits the TSC1/2 complex.56
Met agonist antibodies represent a new important tool enriching the therapeutic arsenal to manage cardiac diseases. Apoptosis is harmful in the reperfusion phase of myocardial infarction.57 Furthermore, apoptosis is involved also in a wide spectrum of inherited cardiomyopathies, myocarditis, transplant rejection and heart failure.58 Met agonist antibodies prove to be effective in inhibiting autophagy as well, a less considered mechanism of cell damage in heart diseases. While several studies have reported that basal levels of autophagy are required for cardiac homoeostasis,59 induction of autophagic flux in response to ischaemia/reperfusion insult is detrimental;11, 60 thus, new tools against autophagic damage are desirable. This work provides a novel therapeutic approach to cardiac diseases that offers molecules displaying a dual mechanism of prosurvival activity.
Materials and Methods
Reagents
The rat cardiomyoblasts cell line H9c2 was purchased from the American Type Culture Collection (ATCC, Manassas, VA, USA). The two Met agonist mAbs (DN30 and DO24) were produced by one of us (RA) from hybridomas obtained with the fusion between the immune spleen cells from Balb/c mice (Charles River Laboratories, Wilmington, MA, USA) immunized with GTL-16 cells, where the MET proto-oncogene is amplified and overexpressed, and the P3.X63.Ag8.653 myeloma cells. The purification and selection of the antibodies were performed as described in Prat et al.16 HGF was acquired from Tebu-Bio (Le-Perray-en-Yvelines, FR), whereas CoCl2 and anti-VSV-G mAb were from Sigma (St. Louis, MO, USA). CoCl2 was dissolved in water. Met tyrosine kinase inhibitor PHA-665752 (PHA, 500 nM) was supplied by Pfizer (New York, NY, USA). mTor inhibitor Temsirolimus was used at 1 μM and purchased from Sigma. The following inhibitors were purchased from Sigma: zVAD (caspase inhibitor, 50 μM), 3-MA (inhibitor of class III PI3K Vps34, 1 mM) and Baf (inhibitor of the lysosomal vacuolar H+ ATPase, 50 nM).
Cell culture and treatment
H9c2 cells were cultured in Dulbecco’s modified Eagle’s medium (DMEM, Sigma) supplemented with 10% fetal bovine serum (FBS, Sigma), 1% penicillin (Sigma), 1% streptomycin (Sigma) and 1% L-Glutamine (Sigma) and were incubated under 5% CO2 at 37 °C. Cells were passed regularly and subcultured to ∼80/90% of confluence before all the experiments.
To mimic hypoxic conditions, the cell culture was starved with 0.5% FBS and then treated with CoCl2 at various concentrations and for different lengths of time. In real hypoxia experiments, cells were cultured at low oxygen tension (1%) in a HeraCell (AHSI, Bernareggio, MB, Italy) incubator. HGF (0.5 nM) and the two Met agonist antibodies (DN30 and DO24, 100 nM) were administrated alone or concomitantly with the hypoxic treatment. The mAb against the VSV-G (100 or 300 nM) was used as control.
Immunoprecipitation (IP) and immunoblot (WB) analyses
Cells were lysed in two types of ice-cold lysis buffers: the not denaturant Dim Buffer for IP analysis and the RIPA Buffer for direct WB experiments, both added with protease inhibitor cocktail (Sigma). Cell lysates were subsequently sonicated and centrifuged at 14 000 r.p.m. (20 min at +4 °C). The protein concentration was evaluated through the Bio-Rad protein assay (Bio-Rad Laboratories, Hercules, CA, USA). For the IP analysis, 1.2 mg of cell lysates were incubated overnight at +4 °C with 5 μg DN30 and DO24 for Met IP or with 5 μg anti-Gab1 antibody (Millipore, Billerica, MA, USA) for Gab1 IP. Then, 20 μl of protein G sepharose (GE-healthcare, Little Chalfont, BKM, UK) were added and incubated for 2 h at +4 °C. The WB and IP lysates were separated using SDS-PAGE and transferred to Hybond-P pvdf membrane (Amersham plc, Amersham, BKM, UK). After incubation in blocking solution (10% bovine serum albumin, BSA, Sigma) at room temperature (RT), membranes were incubated overnight at +4 °C with the primary antibodies (see Supplementary Table S1). Membranes were washed and then incubated with specific horseradish peroxidase-conjugated secondary antibodies (Amersham) for 1 h at RT. The proteins were revealed by enhanced chemiluminescence of the ECL Prime detection kit (GE-healthcare) and quantified with the Image Lab software (Bio-Rad Laboratories).
Analysis of cell death: MTT assay, DAPI stain and cell count
Cell viability was evaluated using the MTT quantitative colorimetric assay (Roche Applied Science, Indianapolis, IN, USA). The absorbance of the converted purple formazan crystals from the yellow solution was measured at 595 nm.
Pyknosis was evaluated through DAPI stain. Cells, after washing with phosphate-buffered saline (PBS), were fixed with 95% ethanol for 10 min at RT. Staining with DAPI was performed for 30 min at +37 °C. Then cells were washed with PBS and fluorescence was evaluated with the DMRI Leica inverted microscope. The percentage of pyknotic nuclei in the total number of nuclei was counted. For each treatment 10 independent evaluations were taken.
The cell count was performed in the burker chamber. We measured the number of cells in 1 ml of DMEM.
Flow cytometric analysis
To observe Met expression on cellular surface, ∼2 × 105 cells, resuspended in 100 μl of PBS added with 1% FBS, were stained 20 min at RT, in the dark, with DN30 and DO24 mAbs previously conjugated with PE-Cy7 fluorochrome (using Lightning-Link PE-Cy7 Tandem Conjugation Kit, Innova Biosciences, Cambridge, UK). After wash, samples were analysed on a CyAn ADP LX nine-color analyser (Beckman Coulter, Brea, CA, USA). Dead cells were eliminated by excluding DAPI-positive population.
Wound-healing assay
Cells were plated in 24-well plates and maintained in DMEM 10% FBS until confluence, and then were incubated in DMEM 0.5% FBS for 18 h. The monolayers were wounded with a plastic pipette and a cross between two lines was created. Then cells were washed with PBS and incubated for 24, 48 and 72 h in medium with or without HGF, Met agonist mAbs or anti-VSV-G mAb. Images of wound at the start moment and after the treatment were taken with DMRI Leica inverted microscope. Migration was quantified by evaluating the area of wound at time zero (A0) and at time after the treatment (Ay, y=24 h, 48 or 72 h). Normalization and quantification on the basis of three independent experiments were obtained by the formula (A0−Ay)/A0.
mRNA analysis: semi-quantitative reverse-transcription PCR and real-time PCR
Total RNA was extracted with Trizol reagent, following the manufacturer’s protocol (Invitrogen, Carlsbad, CA, USA). Then RNA was quantified with the NanoDrop ND-1000 and the reverse transcription was performed using High Capacity cDNA Reverse Transcription Kit according to the manufacturer’s recommendation (Applied Biosystem, Foster City, CA, USA). The cDNA was used for real-time PCR analysis using the SsoFast EvaGreen supermix and the MiniOpticon Thermal Cycler (Bio-Rad Laboratories) and for semi-quantitative RT-PCR using various primers (see Supplementary Table S2). Control samples were prepared without adding the RT enzyme to the reaction, and β-actin was used as control.
IF analysis
Cells plated in 24-well plates were fixed with ice-cold 4% paraformaldehyde (PAF, Sigma) dissolved in PBS for 10 min and then washed with PBS. In all the experiments, except for the membrane fluorescence of Supplementary Figure S1b, left panel, the fixed cells were permeabilized with 0.1% Triton X-100 (Sigma). Then the cells were saturated with BSA (1%, Sigma) and incubated with the primary antibody (See Supplementary Table S1) for 1 h at RT. Secondary antibody incubation was performed with the Alexa Fluor 488-conjugated goat anti-mouse or anti-rabbit antibody or with the Alexa Fluor 546-conjugated goat anti-mouse antibody (Molecular Probes/Invitrogen) for 1 h at RT. DAPI was added at the end of secondary antibody incubation for 5 min at RT. Images were taken through the DMRE Leica fluorescence microscope and processed with LAS AF software (Leica Microsystems, Wetzlar, Germany).
Statistical analysis
All data are expressed as the mean±S.D. The significant difference between the means taken from different samples was analysed through independent two-tailed t-tests. P-value <0.05 was considered statistically significant. For experimental details see each figure legend.
Abbreviations
- Baf:
-
Bafylomicin A1
- CoCl2:
-
cobalt chloride
- HGF:
-
hepatocyte growth factor
- LC3:
-
microtubule-associated protein light chain 3
- mAbs:
-
monoclonal antibodies
- MTT assay:
-
3-(4,5-dimethyl-2-thiazolyl)-2,5-diphenyl-2H-tetrazolium bromide assay
- PHA:
-
PHA-665752
- Tem:
-
Temsirolimus
- zVAD (zVAD fmk):
-
benzyloxycarbonyl-VAD-fluoromethylketone
- 3-MA:
-
3-methyladenine
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Acknowledgements
We gratefully acknowledge the technical support of Costanzo Costamagna (hypoxic incubator) and Fabrizio Pin (Real-Time PCR). This work was supported by grants from the Association Française contre les Myopathies (AFM no. 15816) to TC and from AIRC to PMC (IG no. 11852) and to PC (IG no. 9153). Fellowship of VS was provided by FP7-2010-ICT-GC ‘‘EM-SAFETY’’ project no. 265772.
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Gallo, S., Gatti, S., Sala, V. et al. Agonist antibodies activating the Met receptor protect cardiomyoblasts from cobalt chloride-induced apoptosis and autophagy. Cell Death Dis 5, e1185 (2014). https://doi.org/10.1038/cddis.2014.155
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DOI: https://doi.org/10.1038/cddis.2014.155
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