Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Protocol
  • Published:

Expanded-bed adsorption immobilized-metal affinity chromatography

Abstract

The protocol describes a method for capture of secreted hexahistidine-tagged proteins using expanded-bed adsorption immobilized-metal affinity chromatography. The starting material for the procedure is any crude feedstock that contains a histidine (His)-tagged target protein. The protocol is exemplified using unclarified broth from Pichia pastoris fermentation as feedstock. The protocol can be used for laboratory studies or as part of a process for production of recombinant biotherapeutics to standards of good manufacturing practice. It takes approximately 5 h to purify proteins from 10 liters of feedstock and a further 5–6 h to sterilize and regenerate the column.

This is a preview of subscription content, access via your institution

Access options

Buy this article

Prices may be subject to local taxes which are calculated during checkout

Figure 1: Expanded-bed systems.
Figure 2: Addition of the biomass to the column.
Figure 3: Anticipated sample trace and pictures of key stages during expanded-bed chromatography.
Figure 4: Anticipated product purification during EBA, illustrated with sm3e, a humanized scFv (ref. 25).

Similar content being viewed by others

References

  1. Hubbuch, J., Thommes, J. & Kula, M.R. Biochemical engineering aspects of expanded bed adsorption. Adv. Biochem. Eng. Biotechnol. 92, 101–123 (2005).

    CAS  PubMed  Google Scholar 

  2. Jahic, M., Gustavsson, M., Jansen, A.K., Martinelle, M. & Enfors, S.O. Analysis and control of proteolysis of a fusion protein in Pichia pastoris fed-batch processes. J. Biotechnol. 102, 45–53 (2003).

    Article  CAS  Google Scholar 

  3. Sinha, J., Plantz, B.A., Inan, M. & Meagher, M.M. Causes of proteolytic degradation of secreted recombinant proteins produced in methylotrophic yeast Pichia pastoris: case study with recombinant ovine interferon-τ. Biotechnol. Bioeng. 89, 102–112 (2005).

    Article  CAS  Google Scholar 

  4. Macauley-Patrick, S., Fazenda, M.L., McNeil, B. & Harvey, L.M. Heterologous protein production using the Pichia pastoris expression system. Yeast 22, 249–270 (2005).

    Article  CAS  Google Scholar 

  5. Tolner, B., Smith, L., Begent, R.H.J. & Chester, K.A. Production of recombinant protein in Pichia pastoris by fermentation. Nat. Protocols 1, 1006–1021 (2006).

    Article  CAS  Google Scholar 

  6. Robinson, M.K. et al. Quantitative immuno-positron emission tomography imaging of HER2-positive tumor xenografts with an iodine-124 labeled anti-HER2 diabody. Cancer Res. 65, 1471–1478 (2005).

    Article  CAS  Google Scholar 

  7. Sharma, S.K. et al. Sustained tumor regression of human colorectal cancer xenografts using a multifunctional mannosylated fusion protein in antibody-directed enzyme prodrug therapy. Clin. Cancer Res. 11, 814–825 (2005).

    CAS  Google Scholar 

  8. Mayer, A. et al. Modifying an immunogenic epitope on a therapeutic protein: a step towards an improved system for antibody-directed enzyme prodrug therapy (ADEPT). Br. J. Cancer 90, 2402–2410 (2004).

    Article  CAS  Google Scholar 

  9. Gaberc-Porekar, V. & Menart, V. Perspectives of immobilized-metal affinity chromatography. J. Biochem. Biophys. Methods 49, 335–360 (2001).

    Article  CAS  Google Scholar 

  10. Charoenrat, T., Ketudat-Cairns, M., Jahic, M., Enfors, S.O. & Veide, A. Recovery of recombinant β-glucosidase by expanded bed adsorption from Pichia pastoris high-cell-density culture broth. J. Biotechnol. 122, 86–98 (2006).

    Article  CAS  Google Scholar 

  11. Jahic, M., Knoblechner, J., Charoenrat, T., Enfors, S.O. & Veide, A. Interfacing Pichia pastoris cultivation with expanded bed adsorption. Biotechnol. Bioeng. 93, 1040–1049 (2006).

    Article  CAS  Google Scholar 

  12. de Lamotte, F. Single step purification of a series of wheat recombinant proteins with expanded bed absorption chromatography. J. Chromatogr. B Analyt. Technol. Biomed. Life Sci. 818, 29–33 (2005).

    Article  CAS  Google Scholar 

  13. Camprubi, S., Bruguera, M. & Canalias, F. Purification of recombinant histidine-tag streptolysin O using immobilized metal affinity expanded bed adsorption (IMA-EBA). Int. J. Biol. Macromol. 38, 134–139 (2006).

    Article  CAS  Google Scholar 

  14. Sahin, A., Tetaud, E., Merlin, G. & Santarelli, X. LdARL-1 His-tagged recombinant protein: purification by immobilized metal affinity expanded bed adsorption. J. Chromatogr. B Analyt. Technol. Biomed. Life Sci. 818, 19–22 (2005).

    Article  CAS  Google Scholar 

  15. Ohashi, R., Otero, J.M., Chwistek, A., Yamato, I. & Hamel, J.F. On-line purification of monoclonal antibodies using an integrated stirred-tank reactor/expanded-bed adsorption system. Biotechnol. Prog. 18, 1292–1300 (2002).

    Article  CAS  Google Scholar 

  16. Valdes, R. et al. Large-scale purification of an antibody directed against hepatitis B surface antigen from transgenic tobacco plants. Biochem. Biophys. Res. Commun. 308, 94–100 (2003).

    Article  CAS  Google Scholar 

  17. Brixius, P. et al. Expanded bed adsorption as a primary recovery step for the isolation of the insulin precursor MI3 process development and scale up. Biotechnol. Bioeng. 93, 14–20 (2006).

    Article  CAS  Google Scholar 

  18. Niu, J.F., Wang, G.C. & Tseng, C.K. Method for large-scale isolation and purification of R-phycoerythrin from red alga Polysiphonia urceolata Grev. Protein Expr. Purif. 49, 23–31 (2006).

    Article  CAS  Google Scholar 

  19. Peixoto, C., Ferreira, T.B., Carrondo, M.J., Cruz, P.E. & Alves, P.M. Purification of adenoviral vectors using expanded bed chromatography. J. Virol. Methods 132, 121–126 (2006).

    Article  CAS  Google Scholar 

  20. Van Boxtel, E.L. et al. Expanded bed adsorption as a fast technique for the large-scale purification of the complete isoform pool of Ber e 1, the major allergen from Brazil nuts. Mol. Nutr. Food Res. 50, 275–281 (2006).

    Article  CAS  Google Scholar 

  21. Cabanne, C. et al. Purification and on-column refolding of EGFP overexpressed as inclusion bodies in Escherichia coli with expanded bed anion exchange chromatography. J. Chromatogr. B Analyt. Technol. Biomed. Life Sci. 818, 23–27 (2005).

    Article  CAS  Google Scholar 

  22. Jin, T., Guan, Y.X., Yao, S.J., Lin, D.Q. & Cho, M.G. On-column refolding of recombinant human interferon-γ inclusion bodies by expanded bed adsorption chromatography. Biotechnol. Bioeng. 93, 755–760 (2006).

    Article  CAS  Google Scholar 

  23. Casey, J.L. et al. Purification of bacterially expressed single chain Fv antibodies for clinical applications using metal chelate chromatography. J. Immunol. Methods 179, 105–116 (1995).

    Article  CAS  Google Scholar 

  24. Schier, R. et al. In vitro and in vivo characterization of a human anti-c-erbB-2 single-chain Fv isolated from a filamentous phage antibody library. Immunotechnology 1, 73–81 (1995).

    Article  CAS  Google Scholar 

  25. Graff, C.P., Chester, K., Begent, R. & Wittrup, K.D. Directed evolution of an anti-carcinoembryonic antigen scFv with a 4-day monovalent dissociation half-time at 37 °C. Protein Eng. Des. Sel. 17, 293–304 (2004).

    Article  CAS  Google Scholar 

Download references

Acknowledgements

The authors would like to thank J. Bhatia, T. Hillyer and K. Vigor for contributions to this manuscript. Work is supported by Cancer Research UK, The Royal Free Cancer Research Trust, The Copley May Foundation and NTRAC.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Berend Tolner.

Ethics declarations

Competing interests

The authors declare no competing financial interests.

Supplementary information

Supplementary Methods 1

Aseptic handlings, pichia spillage and disposal of waste. (PDF 74 kb)

Supplementary Methods 2

Guidelines for expanded bed adsorption - IMAC process development. (PDF 80 kb)

Supplementary Note

Expanded Bed Adsorption - IMAC Process Log Sheet (PDF 110 kb)

Rights and permissions

Reprints and permissions

About this article

Cite this article

Tolner, B., Smith, L., Begent, R. et al. Expanded-bed adsorption immobilized-metal affinity chromatography. Nat Protoc 1, 1213–1222 (2006). https://doi.org/10.1038/nprot.2006.127

Download citation

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1038/nprot.2006.127

This article is cited by

Comments

By submitting a comment you agree to abide by our Terms and Community Guidelines. If you find something abusive or that does not comply with our terms or guidelines please flag it as inappropriate.

Search

Quick links

Nature Briefing

Sign up for the Nature Briefing newsletter — what matters in science, free to your inbox daily.

Get the most important science stories of the day, free in your inbox. Sign up for Nature Briefing