Introduction
Materials and methods
Ethics
Patient selection
Clinical data acquisition
P. gingivalis assessment
Bioinformatics analyses
Histopathologic assessment
Statistical analysis
Results
General information of study population
Identification of DOK3 as a key DEG in the TME of OSCC infected with P. gingivalis
IHC analysis of P. gingivalis in OSCC patients and associations with clinicopathological parameters
Variable | P. gingivalis | P value | |
---|---|---|---|
Weak (%) | Strong (%) | ||
Sex | 0.282 | ||
Male | 27 (44.3) | 73 (52.5) | |
Female | 34 (55.7) | 66 (47.5) | |
Age (yr) | 0.580 | ||
< 60 | 24 (39.3) | 49 (35.3) | |
≥ 60 | 37 (60.7) | 90 (64.7) | |
Survival status | 0.002** | ||
Alive | 50 (82.0) | 83 (59.7) | |
Dead | 11 (18.0) | 56 (40.3) | |
Tobacco smoking | 0.000*** | ||
No | 31 (50.8) | 37 (26.6) | |
Yes | 30 (49.2) | 102 (73.4) | |
Alcohol consumption | 0.160 | ||
No | 32 (52.5) | 58 (41.7) | |
Yes | 29 (47.5) | 81 (58.3) | |
Baseline severe dysphagia (Gr.3–6)a | 0.905 | ||
No | 50 (82.0) | 79 (56.8) | |
Yes | 11 (18.0) | 60 (43.2) | |
Diet | 0.181 | ||
Vegetarian | 12 (19.7) | 7 (5.0) | |
Non-vegetarian | 49 (80.3) | 132 (95.0) | |
Milk & dairy products | 0.026 | ||
Never | 0 | 2 (1.4) | |
Less than once a week | 7 (11.5) | 22 (15.8) | |
More than once a week | 54 (88.5) | 115 (82.8) | |
T stageb | 0.000*** | ||
T1 ~ T2 | 47 (77.0) | 72 (51.8) | |
T3 ~ T4 | 14 (23.0) | 67 (48.2) | |
N stageb | 0.025* | ||
N0 | 48 (78.7) | 87 (62.6) | |
N ( +) | 13 (21.3) | 52 (37.4) | |
Clinical stageb | 0.000*** | ||
I ~ II | 44 (72.1) | 56 (40.3) | |
III ~ IV | 17 (27.9) | 83 (59.7) | |
Recurrence | 0.298 | ||
Yes | 7 (11.5) | 24 (17.3) | |
No | 54 (88.5) | 115 (82.7) | |
Tumor size (cm) | 0.014* | ||
< 3 | 36 (59.0) | 55 (39.6) | |
≥ 3 | 25 (41.0) | 84 (60.4) | |
Differentiation | 0.003** | ||
Well | 49 (80.33) | 80 (57.6) | |
Moderate | 11 (18.03) | 38 (27.3) | |
Poor | 1 (1.64) | 21 (15.1) | |
Periodontal condition | 0.000*** | ||
Well | 28 (45.9) | 28 (20.1) | |
Poor | 33 (54.1) | 111 (79.9) | |
Oral hygiene habitsc | 0.019* | ||
Good | 16 (26.2) | 51 (36.7) | |
Average | 41 (67.2) | 69 (49.6) | |
Bad | 4 (6.6) | 19 (13.7) | |
Treatment | 0.351 | ||
Surgery | 16 (26.2) | 47 (33.8) | |
Radiotherapy | 22 (36.1) | 37 (26.6) | |
Chemoradiation/comprehensive | 23 (37.7) | 55 (39.6) |
IHC analysis of DOK3 and M2-TAMs in P. gingivalis-infected TME of OSCC patients
Variable | DOK3 | P value | M2-TAMs | P value | ||
---|---|---|---|---|---|---|
Weak (%) | Strong (%) | Weak (%) | Strong (%) | |||
Sex | 0.406 | 0.085* | ||||
Male | 27 (57.4) | 46 (50.0) | 27 (44.3) | 46 (59.0) | ||
Female | 20 (42.6) | 46 (50.0) | 34 (55.7) | 32 (41.0) | ||
Age (yr) | 0.042* | 0.372 | ||||
< 60 | 22 (46.8) | 27 (29.3) | 24 (39.3) | 25 (32.1) | ||
≥ 60 | 25 (53.2) | 65 (70.7) | 37 (60.7) | 53 (67.9) | ||
Survival status | 0.004** | 0.052 | ||||
Alive | 36 (76.6) | 47 (51.1) | 42 (68.9) | 41 (52.6) | ||
Dead | 11 (23.4) | 45 (48.9) | 19 (31.1) | 37 (47.4) | ||
Tobacco smoking | 0.026* | 0.632 | ||||
No | 18 (38.3) | 19 (20.7) | 15 (24.6) | 22 (28.2) | ||
Yes | 29 (61.7) | 73 (79.3) | 46 (75.4) | 56 (71.8) | ||
Alcohol consumption | 0.614 | 0.000*** | ||||
No | 21 (44.7) | 37 (40.2) | 35 (57.4) | 23 (29.5) | ||
Yes | 26 (55.3) | 55 (59.8) | 26 (42.6) | 55 (70.5) | ||
Baseline severe dysphagia (Gr.3–6) | 0.000*** | 0.028* | ||||
No | 38 (80.9) | 41 (44.6) | 43 (70.5) | 36 (46.2) | ||
Yes | 9 (19.1) | 51 (55.4) | 18 (29.5) | 42 (53.8) | ||
Diet | 0.138 | 0.097 | ||||
Vegetarian | 7 (14.9) | 0 | 5 (8.2) | 2 (2.6) | ||
Non-vegetarian | 40 (85.1) | 92 (100) | 56 (91.8) | 76 (97.4) | ||
Milk & dairy products | 0.677 | 0.240 | ||||
Never | 1 (2.1) | 1 (1.1) | 0 | 2 (2.6) | ||
Less than once a week | 10 (21.3) | 12 (13.0) | 10 (16.4) | 12 (15.4) | ||
More than once a week | 36 (76.6) | 79 (85.9) | 51 (83.6) | 64 (82.0) | ||
T stage | 0.023* | 0.017* | ||||
T1 ~ T2 | 31 (66.0) | 42 (45.7) | 39 (63.9) | 34 (43.6) | ||
T3 ~ T4 | 16 (34.0) | 50 (54.3) | 22 (36.1) | 44 (56.4) | ||
N stage | 0.088 | 0.319 | ||||
N0 | 34 (72.3) | 53 (57.6) | 41 (67.2) | 46 (59.0) | ||
N ( +) | 13 (27.7) | 39 (42.4) | 20 (32.8) | 32 (41.0) | ||
Clinical stage | 0.697 | 0.025* | ||||
I ~ II | 20 (42.6) | 36 (39.1) | 31 (50.8) | 25 (32.1) | ||
III ~ IV | 27 (57.4) | 56 (60.9) | 30 (49.2) | 53 (67.9) | ||
Recurrence | 0.675 | 0.114 | ||||
Yes | 9 (19.1) | 15 (16.3) | 7 (11.5) | 17 (21.8) | ||
No | 38 (80.9) | 77 (83.7) | 54 (88.5) | 61 (78.2) | ||
Tumor size (cm) | 0.000*** | 0.619 | ||||
< 3 | 29 (61.7) | 27 (29.3) | 26 (42.6) | 30 (38.5) | ||
≥ 3 | 18 (38.3) | 65 (70.7) | 35 (57.4) | 48 (61.5) | ||
Differentiation | 0.256 | 0.083 | ||||
Well | 33 (70.2) | 47 (51.1) | 42 (68.85) | 38 (48.7) | ||
Moderate | 10 (21.3) | 28 (30.4) | 14 (22.95) | 24 (30.8) | ||
Poor | 4 (8.5) | 17 (18.5) | 5 (8.20) | 16 (20.5) | ||
Oral hygiene habits | 0.020* | 0.044* | ||||
Good | 5 (10.6) | 15 (16.3) | 8 (13.1) | 12 (15.4) | ||
Average | 15 (31.9) | 36 (39.1) | 22 (36.1) | 29 (37.2) | ||
Bad | 27 (57.5) | 41 (44.6) | 31 (50.8) | 37 (47.4) | ||
Periodontal condition | 0.013* | 0.248 | ||||
Well | 15 (31.9) | 13 (14.1) | 15 (24.6) | 13 (16.7) | ||
Poor | 32 (68.1) | 79 (85.9) | 46 (75.4) | 65 (83.3) | ||
Treatment | 0.175 | 0.035* | ||||
Surgery | 11 (23.4) | 36 (39.1) | 19 (31.1) | 28 (35.9) | ||
Radiotherapy | 14 (29.8) | 23 (25.0) | 11 (18.0) | 26 (33.3) | ||
Chemoradiation/comprehensive | 22 (46.8) | 33 (35.9) | 31 (50.8) | 24 (30.8) |
Variable | DOK3 | P value | M2-TAMs | P value | ||
---|---|---|---|---|---|---|
Weak (%) | Strong (%) | Weak (%) | Strong (%) | |||
P. gingivalis | < 0.001 | < 0.001 | ||||
Weak | 38 (62.3) | 23 (37.7) | 41 (71.9) | 16 (28.1) | ||
Strong | 47 (33.8) | 92 (66.2) | 61 (42.7) | 82 (57.3) | ||
Total | 85 (42.5) | 115 (57.5) | 102 (51.0) | 98 (49.0) |
Impact of P. gingivalis, DOK3, and M2-TAM immunoexpression on cumulative survival estimates of OSCC patients
Variable | Total no. = 200 | Survival rate (%) | HR value | 95% CI | P value | |
---|---|---|---|---|---|---|
Sex | Male | 100 | 50.0 | Ref | Ref | Ref |
Female | 100 | 50.0 | 0.824 | 0.436–1.618 | 0.847 | |
Age (yr) | ≥ 60 | 127 | 63.5 | Ref | Ref | Ref |
< 60 | 73 | 36.5 | 0.662 | 0.296–0.963 | 0.028* | |
Survival status | Alive | 133 | 66.5 | Ref | Ref | Ref |
Dead | 67 | 33.5 | 0.982 | 0.216–2.052 | 0.729 | |
Tobacco smoking | No | 68 | 34.0 | Ref | Ref | Ref |
Yes | 132 | 66.0 | 1.046 | 0.612–1.894 | 0.853 | |
Alcohol consumption | No | 90 | 45.0 | Ref | Ref | Ref |
Yes | 110 | 55.0 | 0.516 | 0.213–1.021 | 0.092 | |
Diet | Vegetarian | 19 | 9.5 | Ref | Ref | Ref |
Non-vegetarian | 181 | 90.5 | 0.626 | 0.240–1.117 | 1.701 | |
Milk & dairy products | Never | 2 | 1.0 | Ref | Ref | Ref |
Less than once a week | 29 | 14.5 | 0.552 | 0.295–0.997 | 1.692 | |
More than once a week | 169 | 84.5 | 0.755 | 0.262–1.229 | 0.183 | |
BMI | < 22.5 | 132 | 66.0 | Ref | Ref | Ref |
≥ 22.5 | 68 | 34.0 | 0.646 | 0.313–0.947 | 0.032* | |
Baseline severe dysphagia (Gr.3–6) | No | 129 | 64.5 | Ref | Ref | Ref |
Yes | 71 | 35.5 | 1.579 | 1.002–1.859 | 0.677 | |
T stage | T1 ~ T2 | 119 | 59.5 | Ref | Ref | Ref |
T3 ~ T4 | 81 | 40.5 | 1.441 | 0.522–1.619 | 0.002** | |
N stage | N0 | 135 | 67.5 | Ref | Ref | Ref |
N ( +) | 65 | 32.5 | 0.968 | 0.248–1.635 | 0.818 | |
Clinical stage | I ~ II | 100 | 50.0 | Ref | Ref | Ref |
III ~ IV | 100 | 50.0 | 1.395 | 0.573–1.726 | 0.016* | |
Recurrence | Yes | 31 | 15.5 | Ref | Ref | Ref |
No | 169 | 84.5 | 0.813 | 0.546–1.024 | 0.005** | |
Tumor size (cm) | < 3 | 91 | 45.5 | Ref | Ref | Ref |
≥ 3 | 109 | 54.5 | 0.822 | 0.072–1.098 | 0.022* | |
Differentiation | Well | 129 | 64.5 | Ref | Ref | Ref |
Moderate | 49 | 24.5 | 1.025 | 0.717–1.446 | 0.000*** | |
Poor | 22 | 11.0 | 1.806 | 0.428–2.352 | 0.017* | |
Neck dissection | No | 137 | 68.5 | Ref | Ref | Ref |
Yes | 63 | 31.5 | 0.923 | 0.625–2.163 | 0.027* | |
Oral hygiene habits | Good | 67 | 33.5 | Ref | Ref | Ref |
Average | 110 | 55.0 | 0.995 | 0.026–1.655 | 0.066 | |
Bad | 23 | 11.5 | 1.229 | 0.183–1.975 | 0.018* | |
Periodontal condition | Well | 56 | 28.0 | Ref | Ref | Ref |
Poor | 144 | 72.0 | 1.437 | 0.846–1.895 | 0.043* | |
P. gingivalis | Weak | 61 | 30.5 | Ref | Ref | Ref |
Strong | 139 | 69.5 | 1.137 | 0.135–1.503 | 0.026* | |
DOK3a | Weak | 47 | 33.8 | Ref | Ref | Ref |
Strong | 92 | 66.2 | 1.085 | 0.156–1.514 | 0.018* | |
M2-TAMb | Weak | 61 | 43.9 | Ref | Ref | Ref |
Strong | 78 | 56.1 | 1.419 | 0.283–1.862 | 0.013* |
Variable | β coef | S.E | Wald | HR (95% CI) | P value | |
---|---|---|---|---|---|---|
Age (yr) | ≥ 60 | Ref | Ref | Ref | Ref | Ref |
< 60 | 0.053 | 0.031 | 3.162 | 0.723 (0.311–1.261) | 0.283 | |
BMI | < 22.5 | Ref | Ref | Ref | Ref | Ref |
≥ 22.5 | -0.653 | 0.271 | 5.358 | 0.554 (0.302–0.985) | 0.034* | |
T stage | T1 ~ T2 | Ref | Ref | Ref | Ref | Ref |
T3 ~ T4 | 0.061 | 0.041 | 3.862 | 1.524 (0.471–2.128) | 0.052 | |
Clinical stage | I ~ II | Ref | Ref | Ref | Ref | Ref |
III ~ IV | 0.264 | 0.209 | 6.764 | 1.628 (0.831–2.315) | 0.021* | |
Recurrence | Yes | Ref | Ref | Ref | Ref | Ref |
No | 0.864 | 0.294 | 12.683 | 0.897 (0.629–1.246) | 0.003** | |
Tumor size (cm) | < 3 | Ref | Ref | Ref | Ref | Ref |
≥ 3 | 0.648 | 0.273 | 2.081 | 0.914 (0.127–1.874) | 0.648 | |
Differentiation | Well | Ref | Ref | Ref | Ref | Ref |
Moderate | 0.527 | 0.341 | 13.057 | 1.016 (0.702–1.336) | 0.000*** | |
Poor | 0.954 | 0.527 | 3.152 | 1.811 (0.849–2.717) | 0.381 | |
Neck dissection | No | Ref | Ref | Ref | Ref | Ref |
Yes | 0.421 | 0.137 | 4.689 | 1.624 (0.348–2.526) | 0.757 | |
Periodontal condition | Well | Ref | Ref | Ref | Ref | Ref |
Poor | 0.682 | 0.426 | 1.025 | 1.841 (1.569–3.437) | 0.946 | |
Oral hygiene habits | Good | Ref | Ref | Ref | Ref | Ref |
Average | 0.417 | 0.603 | 3.152 | 1.006 (0.477–1.895) | 0.058 | |
Bad | 0.530 | 0.916 | 5.158 | 1.915 (1.002–2.216) | 0.055 | |
P. gingivalis | Weak | Ref | Ref | Ref | Ref | Ref |
Strong | 0.746 | 0.319 | 6.319 | 1.674 (1.216–4.142) | 0.012* | |
DOK3 | Weak | Ref | Ref | Ref | Ref | Ref |
Strong | 0.547 | 0.307 | 5.527 | 1.881 (1.433–3.457) | 0.042* | |
M2-TAM | Weak | Ref | Ref | Ref | Ref | Ref |
Strong | 0.316 | 0.208 | 5.942 | 1.649 (0.824–3.082) | 0.034* |