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Erschienen in: Diabetologia 4/2008

01.04.2008 | Article

A mitochondrial DNA variant at position 16189 is associated with type 2 diabetes mellitus in Asians

verfasst von: K. S. Park, J. C. Chan, L.-M. Chuang, S. Suzuki, E. Araki, K. Nanjo, L. Ji, M. Ng, M. Nishi, H. Furuta, T. Shirotani, B. Y. Ahn, S. S. Chung, H.-K. Min, S. W. Lee, J. H. Kim, Y. M. Cho, H. K. Lee, for The Study Group of Molecular Diabetology in Asia

Erschienen in: Diabetologia | Ausgabe 4/2008

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Abstract

Aims/hypothesis

This multinational study was conducted to investigate the association between a mitochondrial DNA (mtDNA) T16189C polymorphism and type 2 diabetes in Asians. The mtDNA 16189C variant has been reported to be associated with insulin resistance and type 2 diabetes. However, a recent meta-analysis concluded that it is negatively associated with type 2 diabetes in Europids. Since the phenotype of an mtDNA mutant may be influenced by environmental factors and ethnic differences in the nuclear and mitochondrial genomes, we investigated the association between the 16189C variant and type 2 diabetes in Asians.

Methods

The presence of the mtDNA 16189C variant was determined in 2,469 patients with type 2 diabetes and 1,205 non-diabetic individuals from Korea, Japan, Taiwan, Hong Kong and China. An additional meta-analysis including previously published Asian studies was performed. Since mtDNA nucleotide position 16189 is very close to the mtDNA origin of replication, we performed DNA-linked affinity chromatography and reverse-phase liquid chromatography/tandem mass spectrometry and chromatin immunoprecipitation to identify protein bound to the 16189 region.

Results

Analysis of participants from five Asian countries confirmed the association between the 16189C variant and type 2 diabetes [odds ratio (OR) 1.256, 95% CI 1.08–1.46, p = 0.003]. Inclusion of data from three previously published Asian studies (type 2 diabetes n = 3,283, controls n = 2,176) in a meta-analysis showed similar results (OR 1.335, 95% CI 1.18–1.51, p = 0.000003). Mitochondrial single-stranded DNA-binding protein (mtSSB) was identified as a candidate protein bound to the 16189 region. Chromatin immunoprecipitation in cybrid cells showed that mtSSB has a lower binding affinity for the 16189C variant than the wild-type sequence.

Conclusions/interpretation

The mtDNA 16189C variant is associated with an increased risk of type 2 diabetes in Asians.
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Literatur
1.
Zurück zum Zitat Petersen KF, Dufour S, Befroy D, Garcia R, Shulman GI (2004) Impaired mitochondrial activity in the insulin-resistant offspring of patients with type 2 diabetes. N Engl J Med 350:664–671PubMedCrossRef Petersen KF, Dufour S, Befroy D, Garcia R, Shulman GI (2004) Impaired mitochondrial activity in the insulin-resistant offspring of patients with type 2 diabetes. N Engl J Med 350:664–671PubMedCrossRef
2.
Zurück zum Zitat Maassen JA, ‘t Hart LM, Van Essen E et al (2004) Mitochondrial diabetes: molecular mechanisms and clinical presentation. Diabetes 53(Suppl 1):S103–S109PubMedCrossRef Maassen JA, ‘t Hart LM, Van Essen E et al (2004) Mitochondrial diabetes: molecular mechanisms and clinical presentation. Diabetes 53(Suppl 1):S103–S109PubMedCrossRef
3.
Zurück zum Zitat Wilson FH, Hariri A, Farhi A et al (2004) A cluster of metabolic defects caused by mutation in a mitochondrial tRNA. Science 306:1190–1194PubMedCrossRef Wilson FH, Hariri A, Farhi A et al (2004) A cluster of metabolic defects caused by mutation in a mitochondrial tRNA. Science 306:1190–1194PubMedCrossRef
4.
Zurück zum Zitat Poulton J, Brown MS, Cooper A, Marchington DR, Phillips DI (1998) A common mitochondrial DNA variant is associated with insulin resistance in adult life. Diabetologia 41:54–58PubMedCrossRef Poulton J, Brown MS, Cooper A, Marchington DR, Phillips DI (1998) A common mitochondrial DNA variant is associated with insulin resistance in adult life. Diabetologia 41:54–58PubMedCrossRef
5.
Zurück zum Zitat Poulton J, Luan J, Macaulay V, Hennings S, Mitchell J, Wareham NJ (2002) Type 2 diabetes is associated with a common mitochondrial variant: evidence from a population-based case-control study. Hum Mol Genet 11:1581–1583PubMedCrossRef Poulton J, Luan J, Macaulay V, Hennings S, Mitchell J, Wareham NJ (2002) Type 2 diabetes is associated with a common mitochondrial variant: evidence from a population-based case-control study. Hum Mol Genet 11:1581–1583PubMedCrossRef
6.
Zurück zum Zitat Kim JH, Park KS, Cho YM et al (2002) The prevalence of the mitochondrial DNA 16189 variant in non-diabetic Korean adults and its association with higher fasting glucose and body mass index. Diabet Med 19:681–684PubMedCrossRef Kim JH, Park KS, Cho YM et al (2002) The prevalence of the mitochondrial DNA 16189 variant in non-diabetic Korean adults and its association with higher fasting glucose and body mass index. Diabet Med 19:681–684PubMedCrossRef
7.
Zurück zum Zitat Tang DL, Zhou X, Li X, Zhao L, Liu F (2006) Variation of mitochondrial gene and the association with type 2 diabetes mellitus in a Chinese population. Diabetes Res Clin Pract 73:77–82PubMedCrossRef Tang DL, Zhou X, Li X, Zhao L, Liu F (2006) Variation of mitochondrial gene and the association with type 2 diabetes mellitus in a Chinese population. Diabetes Res Clin Pract 73:77–82PubMedCrossRef
8.
Zurück zum Zitat Momiyama Y, Furutani M, Suzuki Y et al (2003) A mitochondrial DNA variant associated with left ventricular hypertrophy in diabetes. Biochem Biophys Res Commun 312:858–864PubMedCrossRef Momiyama Y, Furutani M, Suzuki Y et al (2003) A mitochondrial DNA variant associated with left ventricular hypertrophy in diabetes. Biochem Biophys Res Commun 312:858–864PubMedCrossRef
9.
Zurück zum Zitat Liou CW, Lin TK, Huei Weng H et al (2007) A common mitochondrial DNA variant and increased body mass index as associated factors for development of type 2 diabetes: additive effects of genetic and environmental factors. J Clin Endocrinol Metab 92:235–239PubMedCrossRef Liou CW, Lin TK, Huei Weng H et al (2007) A common mitochondrial DNA variant and increased body mass index as associated factors for development of type 2 diabetes: additive effects of genetic and environmental factors. J Clin Endocrinol Metab 92:235–239PubMedCrossRef
10.
Zurück zum Zitat Chinnery PF, Elliott HR, Patel S et al (2005) Role of the mitochondrial DNA 16184–16193 poly-C tract in type 2 diabetes. Lancet 366:1650–1651PubMedCrossRef Chinnery PF, Elliott HR, Patel S et al (2005) Role of the mitochondrial DNA 16184–16193 poly-C tract in type 2 diabetes. Lancet 366:1650–1651PubMedCrossRef
11.
Zurück zum Zitat Tanaka M, Cabrera VM, Gonzalez AM et al (2004) Mitochondrial genome variation in eastern Asia and the peopling of Japan. Genome Res 14:1832–1850PubMedCrossRef Tanaka M, Cabrera VM, Gonzalez AM et al (2004) Mitochondrial genome variation in eastern Asia and the peopling of Japan. Genome Res 14:1832–1850PubMedCrossRef
12.
Zurück zum Zitat Alberti KG, Zimmet PZ (1998) Definition, diagnosis and classification of diabetes mellitus and its complications. Part 1: diagnosis and classification of diabetes mellitus provisional report of a WHO consultation. Diabet Med 15:539–553PubMedCrossRef Alberti KG, Zimmet PZ (1998) Definition, diagnosis and classification of diabetes mellitus and its complications. Part 1: diagnosis and classification of diabetes mellitus provisional report of a WHO consultation. Diabet Med 15:539–553PubMedCrossRef
13.
Zurück zum Zitat Choi YS, Ryu BK, Min HK, Lee SW, Pak YK (2005) Analysis of proteome bound to D-loop region of mitochondrial DNA by DNA-linked affinity chromatography and reverse-phase liquid chromatography/tandem mass spectrometry. Ann N Y Acad Sci 1042:88–100PubMedCrossRef Choi YS, Ryu BK, Min HK, Lee SW, Pak YK (2005) Analysis of proteome bound to D-loop region of mitochondrial DNA by DNA-linked affinity chromatography and reverse-phase liquid chromatography/tandem mass spectrometry. Ann N Y Acad Sci 1042:88–100PubMedCrossRef
14.
Zurück zum Zitat Kim M-S, Choie W-S, Shin YS, Yu M-H, Lee S-W (2004) Development of ultra-high pressure capillary reverse-phase liquid chromatography/tandem mass spectrometry for high-sensitive and high-throughput proteomics. Bull Korean Chem Soc 25:1833–1839CrossRef Kim M-S, Choie W-S, Shin YS, Yu M-H, Lee S-W (2004) Development of ultra-high pressure capillary reverse-phase liquid chromatography/tandem mass spectrometry for high-sensitive and high-throughput proteomics. Bull Korean Chem Soc 25:1833–1839CrossRef
15.
Zurück zum Zitat Chomyn A (1996) Platelet-mediated transformation of human mitochondrial DNA-less cells. Methods Enzymol 264:334–339PubMedCrossRef Chomyn A (1996) Platelet-mediated transformation of human mitochondrial DNA-less cells. Methods Enzymol 264:334–339PubMedCrossRef
16.
Zurück zum Zitat Orlando V (2000) Mapping chromosomal proteins in vivo by formaldehyde-crosslinked-chromatin immunoprecipitation. Trends Biochem Sci 25:99–104PubMedCrossRef Orlando V (2000) Mapping chromosomal proteins in vivo by formaldehyde-crosslinked-chromatin immunoprecipitation. Trends Biochem Sci 25:99–104PubMedCrossRef
17.
Zurück zum Zitat Borenstein MHL, Higgins J, Rothstein H (2005) Comprehensive meta-analysis, version 2. Biostat, Englewood Borenstein MHL, Higgins J, Rothstein H (2005) Comprehensive meta-analysis, version 2. Biostat, Englewood
18.
Zurück zum Zitat Hatchell EC, Colley SM, Beveridge DJ et al (2006) SLIRP, a small SRA binding protein, is a nuclear receptor corepressor. Mol Cell 22:657–668PubMedCrossRef Hatchell EC, Colley SM, Beveridge DJ et al (2006) SLIRP, a small SRA binding protein, is a nuclear receptor corepressor. Mol Cell 22:657–668PubMedCrossRef
19.
Zurück zum Zitat Takamatsu C, Umeda S, Ohsato T et al (2002) Regulation of mitochondrial D-loops by transcription factor A and single-stranded DNA-binding protein. EMBO Rep 3:451–456PubMedCrossRef Takamatsu C, Umeda S, Ohsato T et al (2002) Regulation of mitochondrial D-loops by transcription factor A and single-stranded DNA-binding protein. EMBO Rep 3:451–456PubMedCrossRef
20.
Zurück zum Zitat Yasukawa T, Yang MY, Jacobs HT, Holt IJ (2005) A bidirectional origin of replication maps to the major noncoding region of human mitochondrial DNA. Mol Cell 18:651–662PubMedCrossRef Yasukawa T, Yang MY, Jacobs HT, Holt IJ (2005) A bidirectional origin of replication maps to the major noncoding region of human mitochondrial DNA. Mol Cell 18:651–662PubMedCrossRef
21.
Zurück zum Zitat Cho YM, Park KS, Lee HK (2007) Genetic factors related to mitochondrial function and risk of diabetes mellitus. Diabetes Res Clin Pract 77(Suppl 1):S172–S177PubMedCrossRef Cho YM, Park KS, Lee HK (2007) Genetic factors related to mitochondrial function and risk of diabetes mellitus. Diabetes Res Clin Pract 77(Suppl 1):S172–S177PubMedCrossRef
22.
Zurück zum Zitat Pravenec M, Hyakukoku M, Houstek J et al (2007) Direct linkage of mitochondrial genome variation to risk factors for type 2 diabetes in conplastic strains. Genome Res 17:1319–1326PubMedCrossRef Pravenec M, Hyakukoku M, Houstek J et al (2007) Direct linkage of mitochondrial genome variation to risk factors for type 2 diabetes in conplastic strains. Genome Res 17:1319–1326PubMedCrossRef
23.
Zurück zum Zitat Fish J, Raule N, Attardi G (2004) Discovery of a major D-loop replication origin reveals two modes of human mtDNA synthesis. Science 306:2098–2101PubMedCrossRef Fish J, Raule N, Attardi G (2004) Discovery of a major D-loop replication origin reveals two modes of human mtDNA synthesis. Science 306:2098–2101PubMedCrossRef
24.
Zurück zum Zitat Fuku N, Park KS, Yamada Y et al (2007) Mitochondrial haplogroup N9a confers resistance against type 2 diabetes in Asians. Am J Hum Genet 80:407–415PubMedCrossRef Fuku N, Park KS, Yamada Y et al (2007) Mitochondrial haplogroup N9a confers resistance against type 2 diabetes in Asians. Am J Hum Genet 80:407–415PubMedCrossRef
25.
Zurück zum Zitat Brown MD, Starikovskaya E, Derbeneva O et al (2002) The role of mtDNA background in disease expression: a new primary LHON mutation associated with Western Eurasian haplogroup J. Hum Genet 110:130–138PubMedCrossRef Brown MD, Starikovskaya E, Derbeneva O et al (2002) The role of mtDNA background in disease expression: a new primary LHON mutation associated with Western Eurasian haplogroup J. Hum Genet 110:130–138PubMedCrossRef
26.
Zurück zum Zitat Malik S, Sudoyo H, Pramoonjago P et al (2002) Nuclear mitochondrial interplay in the modulation of the homopolymeric tract length heteroplasmy in the control (D-loop) region of the mitochondrial DNA. Hum Genet 110:402–411PubMedCrossRef Malik S, Sudoyo H, Pramoonjago P et al (2002) Nuclear mitochondrial interplay in the modulation of the homopolymeric tract length heteroplasmy in the control (D-loop) region of the mitochondrial DNA. Hum Genet 110:402–411PubMedCrossRef
27.
Zurück zum Zitat Munafo MR, Flint J (2004) Meta-analysis of genetic association studies. Trends Genet 20:439–444PubMedCrossRef Munafo MR, Flint J (2004) Meta-analysis of genetic association studies. Trends Genet 20:439–444PubMedCrossRef
Metadaten
Titel
A mitochondrial DNA variant at position 16189 is associated with type 2 diabetes mellitus in Asians
verfasst von
K. S. Park
J. C. Chan
L.-M. Chuang
S. Suzuki
E. Araki
K. Nanjo
L. Ji
M. Ng
M. Nishi
H. Furuta
T. Shirotani
B. Y. Ahn
S. S. Chung
H.-K. Min
S. W. Lee
J. H. Kim
Y. M. Cho
H. K. Lee
for The Study Group of Molecular Diabetology in Asia
Publikationsdatum
01.04.2008
Verlag
Springer-Verlag
Erschienen in
Diabetologia / Ausgabe 4/2008
Print ISSN: 0012-186X
Elektronische ISSN: 1432-0428
DOI
https://doi.org/10.1007/s00125-008-0933-z

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