Targeting of class I histone deacetylases (HDACs) exerts antineoplastic actions in various cancer types by modulation of transcription, upregulation of tumor suppressors, induction of cell cycle arrest, replication stress and promotion of apoptosis. Class I HDACs are often deregulated in urothelial cancer. 4SC-202, a novel oral benzamide type HDAC inhibitor (HDACi) specific for class I HDACs HDAC1, HDAC2 and HDAC3 and the histone demethylase LSD1, shows substantial anti-tumor activity in a broad range of cancer cell lines and xenograft tumor models.
Aim
The aim of this study was to investigate the therapeutic potential of 4SC-202 in urothelial carcinoma (UC) cell lines.
Methods
We determined dose response curves of 4SC-202 by MTT assay in seven UC cell lines with distinct HDAC1, HDAC2 and HDAC3 expression profiles. Cellular effects were further analyzed in VM-CUB1 and UM-UC-3 cells by colony forming assay, caspase-3/7 assay, flow cytometry, senescence assay, LDH release assay, and immunofluorescence staining. Response markers were followed by quantitative real-time PCR and western blotting. Treatment with the class I HDAC specific inhibitor SAHA (vorinostat) served as a general control.
Results
4SC-202 significantly reduced proliferation of all epithelial and mesenchymal UC cell lines (IC50 0.15–0.51 μM), inhibited clonogenic growth and induced caspase activity. Flow cytometry revealed increased G2/M and subG1 fractions in VM-CUB1 and UM-UC-3 cells. Both effects were stronger than with SAHA treatment.
Conclusion
Specific pharmacological inhibition of class I HDACs by 4SC-202 impairs UC cell viability, inducing cell cycle disturbances and cell death. Combined inhibition of HDAC1, HDAC2 and HDAC3 seems to be a promising treatment strategy for UC.
The online version of this article (doi:10.1007/s11523-016-0444-7) contains supplementary material, which is available to authorized users.
1 Introduction
The efficacy of systemic treatment in patients suffering from metastatic urothelial carcinoma (UC) is limited. Although about half of the patients respond initially to platinum-based polychemotherapy, up to 90 % of patients will present with tumor relapse within less than 5 years [1‐3]. Following the successful integration of “targeted therapeutics”, which inhibits distinct cancer pathways, e.g. MAP kinase or PIK3 kinase/Akt signaling, into modern oncological treatment, according approaches have also been tested in UC [4‐6]. However, up to now, none of these attempts has been successful [7, 8]. Inefficacy of targeted therapeutics may be due to various resistance mechanisms by which UC cells circumvent drug-induced inactivation of essential signaling pathways [9].
As cancer pathways generally ultimately exert their effects by regulating gene expression, a more promising treatment strategy might consist of targeting gene expression more directly. This could be achieved, among others, by inhibition of histone deacetylases (HDACs). The HDAC family consists of 18 isoenzymes classified into so-called “classical” HDACs (HDAC1-11; class I, class II and class IV) and sirtuins (Sirt1-7; class III) [10‐12]. Especially, class I HDACs (HDAC1, HDAC2, HDAC3, and HDAC8) act as transcriptional repressors and their expression profiles are prognostic in several malignancies [13‐17]. HDAC inhibitors (HDACi) exhibit therapeutic efficacy in some hematological and solid cancers, and several isoenzyme-unspecific HDACi (pan-HDACi) are approved for the treatment of specific hematological malignancies [18, 19]. In UC cell lines, pan-HDACi are also active by inducing apoptosis and cell cycle arrest [20, 21]. However, the observed preclinical effects of pan-HDACi are limited overall, perhaps because effects on different isoenzymes counterbalance each other.
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Isoenzyme-specific inhibition of distinct HDACs might be more efficient. For example, selective inhibition of HDAC8 inhibited cell proliferation and clonogenic growth in a preclinical neuroblastoma cell culture model and, albeit less efficiently, in urothelial cancer cell lines [22, 23]. In a recent analysis on selective inhibition of class I HDACs, simultaneous and selective inhibition of the class I HDACs HDAC1 and HDAC2 resulted in significant decreases of cell viability, proliferation and clonogenicity associated with accumulation of cells in the G2/M cell cycle phase [24].
4SC-202 is a novel isotype-specific HDAC inhibitor that also inhibits KDM1A/LSD1 (Lysine (K)-specific demethylase 1A). It has been tested in a phase I trial (TOPAS) for the treatment of advanced hematological malignancies [25]. 4SC-202 is a benzamide type inhibitor with strong activity against HDAC1 (IC50: 0.16 μM), HDAC2 (0.37 μM) and HDAC3 (0.13 μM), without affecting other HDAC enzymes at clinically relevant concentrations (IC50: HDAC4, HDAC5, HDAC6, HDAC7, HDAC8, HDAC9, HDAC10, HDAC11 > 15 μM) (updated, unpublished data, personal communication by H.K., detailed data available upon request). The reported IC50 for KDM1A/LSD1 ranges in clinically relevant concentrations from 0.6 to 1.2 μM (Data presented at Sixth Annual EpiCongress, Boston, USA, July 2015, data available online at https://4SC.de).
In this context, we evaluated the efficacy of 4SC-202 in UC cells. To our knowledge, this is the first detailed preclinical characterization of the novel isotype-specific HDAC inhibitor 4SC-202 in UC.
2 Material and Methods
2.1 Cell Culture and Treatment
Experiments were performed in the urothelial cancer cell lines (UCCs) VM-CUB1, RT-112, SW-1710, 639-V, UM-UC-3, 5637 and T-24 (provided by Dr. M. A. Knowles, Leeds, UK; Dr. J. Fogh, New York, USA; Dr. B. Grossmann, Houston, USA; DSMZ, Braunschweig, Germany) representing the heterogeneous phenotypes of urothelial carcinoma and different HDAC expression patterns [20, 24]. To investigate the tumor specificity of 4SC-202, experiments were further performed in two different urothelial control cell lines, HBLAK (spontaneously immortalized from primary human bladder epithelial cells, provided by CELLnTEC, Bern, Switzerland) and TERT-NHUC (TERT-immortalized normal human urothelial cells, provided by Dr. M. A. Knowles, Leeds, UK), and in the non-malignant, non-urothelial cell line HEK-293 (provided by Dr. V. Kolb-Bachofen, Duesseldorf, Germany) as previously described [24]. UCCs and HEK-293 cells were cultured in DMEM GlutaMAX-I (Gibco, Life Technologies, Darmstadt, Germany) supplemented with 10 % fetal calf serum (Biochrom, Berlin, Germany) at 37 °C and 5 % CO2. HBLAK cells were cultured in CnT-Prime Epithelial Culture Medium (CELLnTEC, Bern, Switzerland). TERT-NHUC cells were cultured in supplemented keratinocyte serum-free medium (KSFM, Gibco) [26]. KSFM-Medium was supplemented with 0.25 ng/ml EGF (epidermal growth factor; Gibco), 12.5 μg/ml BPE (bovine pituitary extract; Gibco) and 1 % ITS (insulin transferrin selenium; Life Technologies, Darmstadt, Germany), 0.35 μg/ml N-epinephrine (Sigma Aldrich, St. Louis, MO) and 0.33 mg/ml hydrocortisone (Sigma Aldrich). Differentiation of HBLAK cells was performed after cells reached 90 % confluence according to a published protocol [27]. Briefly, cells were treated with 2 mM CaCl2 and medium was supplemented with 5 % FCS. Cells were maintained under these conditions for 7 days, while medium was changed every 3 days. Subsequently, cells were treated with 0.5 μM, 2.5 μM 4SC-202 or DMSO as a control for 72 h.
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For all cell lines, short tandem repeat (STR) profiling was recently performed by standard DNA fingerprint analysis (analysis reports available upon request; supplemental Table S1 in Online Resource 1).
Inhibitor experiments were performed 24 h after cell seeding with a single dose of 4SC-202 (provided by 4SC AG, Martinsried, Germany), vorinostat (2.5 μM, SAHA [suberoylanilide hydroxamic acid]; #1009929, Cayman Chemicals, Ann Arbor, MI), romidepsin (3 nM, S3020, Selleck Chemicals, Munich, Germany), givinostat (0.5 μM, S2170, Selleck Chemicals) or the LSD1 inhibitor (LSD1i) SP2509 (VM-CUB1: 0.75 μM, UM-UC-3: 0.5 μM, S7680, Selleck Chemicals). Throughout, the previous characterized pan-HDACi SAHA served as control HDACi [20, 24]. The previously characterized class I HDACi romidepsin (histone acetylation, morphology, class I HDAC expression after HDACi treatment) and givinostat (morphology) were used as additional controls or for comparison with 4SC-202 [24]. As a positive control in LDH (lactate dehydrogenase) measurements, cells were treated with bortezomib (50 nM, S1013, Selleck Chemicals) or actinomycin D (4 μg/ml, A1410, Sigma Aldrich). For distinguishing modes of cell death, cells were treated additionally with Necrox-2 (20 μM, sc-391057, Santa Cruz, Dallas, USA) or Q-VD-OPh (30 μM, SML0063, Sigma Aldrich); Etoposide was used to induce apoptosis (25 μM, S1225, Selleck Chemicals) and H2O2 to induce necrosis (30 μM, 107210, Merck, Darmstadt, Germany) as previously described [24]. As a positive control for histone acetylation analysis, VM-CUB1 cells were also treated with romidepsin (3 nM, S3020, Selleck Chemicals) [24]. Inhibitors were dissolved in DMSO (dimethyl sulfoxide) as a stock of 10 mM. Control cells were treated with DMSO only at a maximum of 0.1 %.
2.2 Determination of Mean Inhibitory Concentrations (IC50), Viability, Apoptosis Induction and LDH Assay
The mean inhibitory concentrations (IC50) and viability after 72 h treatment were measured by NAD(P)H-dependent 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide dye reduction assay (MTT, Thiazolyl blue formazan, M2128-G, Sigma Aldrich) as previously described [24]. For IC50 determination, UCCs and control cells were seeded into 96-well plates and treated in three independent experiments with a range of defined concentrations of the inhibitor. Cell viability was additionally measured by the CellTiter-Glo® assay (Promega, Mannheim, Germany). In brief, cells were treated with defined concentrations of HDACi or LSD1i, for 24 and 48 h in six-well plates and viability measurements were performed according to manufacturer’s protocol following transfer of cell aliquots to 96-well plates. Apoptosis induction after 4SC-202 or SAHA treatment was quantified by the Caspase-Glo 3/7 assay (Promega) and normalized to cell viability measured by CellTiter-Glo® as previously described [24]. A necrosis assay measuring lactate dehydrogenase released from damaged cells was performed via the Pierce LDH Cytotoxicity Assay Kit (#88954, Thermo Fisher Scientific, Rockford, USA).
2.3 Colony Forming Assay and Giemsa-Staining
Colony forming assays were performed after 24 h and 48 h HDAC or LSD1 inhibitor treatment. In detail, cells were plated in 6 cm plates at a density of 500–1500 cells per plate. Colonies formed after 2 weeks were washed with PBS (Biochrom, Merck Millipore, Berlin, Germany), fixed in methanol and stained with Giemsa (Merck, Darmstadt, Germany).
2.4 Flow Cytometry
UCCs or control cells were cultured with 0.5 or 2.5 μM 4SC-202, 2.5 μM SAHA, 3 nM romidepsin, 0.5 (UM-UC-3) or 0.75 (VM-CUB1) μM SP2509 (alone or in combination with romidepsin) or DMSO. Cell cycle analyses were performed after 24 and 48 h as previously described [24]. Attached cells and cells in the supernatant were stained with a PI-buffer containing 50 μg/ml propidium iodide, 0.1 % sodium citrate and 0.1 % Triton X-100 [28]. For assessing apoptotic cell death and necrosis, cells were incubated with Annexin V-FITC (fluorescein isothiocyanate, #31490013X2, Immunotools, Friesoythe, Germany), PI (2 μg/ml in PBS) and Annexin V binding buffer. Thereafter, flow cytometry was performed using a Milteny MACSQuant® Analyzer (Milteny Biotec GmbH, Bergisch-Gladbach, Germany).
2.5 Senescence Assay
UCCs or control cells treated with 0.5 or 2.5 μM 4SC-202, 2.5 μM SAHA or DMSO for 24 and 48 h were washed in PBS and fixed in 2 % formaldehyde and 0.2 % glutaraldehyde for 5 min at room temperature. After fixation, cells were washed twice in PBS before being stained overnight at 37 °C with fresh senescence associated β-Gal staining solution (1 mg/ml X-Gal (5-bromo-4-chloro-3-indolyl-beta-D-galacto-pyranoside; Merck, Darmstadt, Germany), 150 mM NaCl, 2 mM MgCl2, 5 mM K3Fe(CN)6, 5 mM K4Fe(CN)6). Images were taken using the NIS-Elements software with a Nikon Eclipse TE2000-S microscope (Nikon, Tokyo, Japan).
2.6 RNA Isolation, cDNA Synthesis and Quantitative Real-Time PCR
RNA isolation, cDNA synthesis and quantitative real-time PCR were performed as previously described [23, 24]. In brief, total RNA from cultured cells was isolated by the Qiagen RNeasy Mini Kit (Qiagen, Hilden, Germany). Synthesis of cDNA was performed using QuantiTect Reverse Transcription Kit (Qiagen, Hilden, Germany) with an extended incubation time of 30 min at 42 °C. QRT-PCR was performed using an ABI 7500 Fast PCR instrument (Life Technologies) with QuantiTect SYBR Green RT-PCR Kit (Qiagen, Hilden, Germany), QuantiTect Primer assays (Qiagen, Hilden, Germany) and self-designed primers, using the housekeeping gene TBP (TATA-box binding protein) as a reference (supplemental Table S2 in Online Resource 1). Technical duplicates had less than 10 % standard deviation.
2.7 Western Blot Analysis
Western blot analysis of whole-cell extracts was done as described previously [20, 24]. In brief, total protein was extracted for 30 min on ice by cell lysis in a RIPA-buffer (150 mM NaCl, 1 % Triton X-100, 0.5 % desoxycholate, 1 % Nonidet P-40, 0.1 % SDS, 1 mM EDTA, 50 mM TRIS (pH 7,6)) containing a protease inhibitor cocktail (10 μl/ml, #P-8340, Sigma-Aldrich). After determination of protein concentration by BCA protein assay (Thermo Scientific, Rockford, IL), lysates were separated in SDS-page gels and transferred to PVDF (polyvinylidene fluoride) membranes (Merck Millipore, Berlin, Germany). Membranes were blocked with 5 % non-fat milk or BSA (bovine serum albumin) in TBST (150 mM NaCl, 10 mM TRIS, pH 7.4 and 0.1 % Tween-20), washed and then incubated with primary antibodies for 1 h at RT or overnight at 4 °C. After washing, the membranes were incubated with horseradish peroxidase-conjugated secondary antibody at RT for 1 h. Bands were visualized by SuperSignal™ West Femto (Thermo Scientific, Rockford, IL) and WesternBright Quantum kit (Biozym, Hessisch Oldendorf, Germany). Alpha-tubulin or GAPDH were detected as loading controls. The antibodies used are listed in supplemental Table S3 in Online Resource 1.
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2.8 Purification and Analysis of Histones
Histones were extracted following a published protocol using sulphuric acid extraction and TCA-precipitation [29]. One μg of each sample was used for western blot analysis with 15 % SDS-PAGE gels and PVDF membranes (Merck Millipore, Berlin, Germany) as described above. Romidepsin (3 nM) treated VM-CUB1 cells served as positive controls for histone H3 and H4 acetylation. Used antibodies are listed in supplemental Table S3 in Online Resource 1.
2.9 Immunofluorescence Stainings
Nuclear morphology analysis and immunofluorescence stainings were performed on UCCs after treatment with the HDACi 4SC-202 (0.5 and 2.5 μM), SAHA (2.5 μM) or DMSO for 24 and 48 h as described before [24]. For nuclear morphology analysis, subsequent to fixation with 4 % formaldehyde, cells were permeabilized with 0.5 % Triton X100 in PBS for 10 min at RT. Blocking was performed in PBS buffer with 1 % BSA for 30 min at RT. The fixed and blocked cells were incubated for 1 h at RT with 14 nM rhodamine phalloidin in blocking solution. Nuclei were stained with 1 μg/ml DAPI (4′,6-diamidino-2-phenylindole) for 3 min before mounting the cover slips with fluorescence mounting medium (DAKO, Glostrup, Denmark). For γH2A.X/53-BP1, double staining blocking (10 % goat serum (Dako), 0.3 M glycine, 0.1 % Triton X100 in PBS) was performed for 1 h at RT. After incubation overnight at 4 °C with the primary antibodies pH2A.X (1:50, #2577, Cell Signaling Technology, Danvers, MA) and 53-BP1 (1:100, clone BP18, 05–725, Merck Millipore), cells were washed and incubated for 1 h at RT with 1:500 diluted Alexa Fluor 488 Goat Anti-Rabbit IgG and 1:250 diluted TRITC-Goat Anti-Mouse IgG (H + L) Conjugate. Cells were counter-stained with 1 μg/ml DAPI (4′,6-diamidino-2-phenylindole) for 3 min. Images were taken with a Nikon Eclipse 400 microscope.
2.10 Statistical Analysis
Significance between groups was assessed by Student’s t-test. p-values of < 0.05 were considered as significant whereas p < 0.01 and p < 0.001 were defined as highly significant. IC50 values and dose–response curves were approximated by non-linear regression analysis using Origin 8.0 (Origin Lab, Northhampton, GB).
3 Results
3.1 4SC-202 Significantly Impacts Proliferation, Morphology and Clonogenicity of UC Cells
First, we determined IC50 values of 4SC-202 in seven UCCs (RT-112, VM-CUB1, SW-1710, 639-V, UM-UC-3, 5637, T-24), two urothelial (HBLAK, TERT-NHUC) and a non-urothelial (HEK-293) benign control. UCCs were chosen based on their HDAC expression profiles and morphological properties (epithelial-like vs. mesenchymal-like) as previously described [20, 24]. Treatment with 4SC-202 resulted in a dose-dependent, significantly reduced proliferation rate of all UCCs, independent of their HDAC expression profile described elsewhere [20, 24], with only slight variations in IC50 values (range: 0.15 – 0.51 μM). In HBLAK, TERT-NHUC and HEK-293 cells, IC50 was 0.38, 0.27 and 0.20 μM, respectively (Table 1, Fig. 1a). To investigate how non-proliferative or differentiated HBLAK cells respond to 4SC-202 treatment, we assessed the effect of 4SC-202 on HBLAK cells in a confluent, growth-arrested or differentiated state induced by a Ca2+/FCS differentiation protocol (Fig. 1b). Both growth-arrested and differentiated HBLAK cells were markedly less sensitive to 4SC-202, but with only slight differences between differentiated and undifferentiated cells.
Table 1
4SC-202 mean inhibitory concentrations (IC50)
Cell line
IC50 (SD) [μM]
Urothelial cancer cell lines
RT-112
0.40 (0.04)
5637
0.15 (0.02)
VM-CUB-1
0.38 (0.08)
SW-1710
0.47 (0.03)
639-V
0.38 (0.05)
UM-UC-3
0.51 (0.11)
T24
0.36 (0.04)
Control cell lines
HBLAK
0.38 (0.05)
HEK-293
0.20 (0.09)
TERT-NHUC
0.27 (0.08)
After treatment of cells with 4SC-202 for 72 h, MTT assay was performed to assess cell viability. The cell lines highlighted by bold letters were used to further functional experiments. SD standard deviation
Fig. 1
Impact of specific pharmacological inhibition of class I HDAC isoenzymes with 4SC-202 on UCCs and control cells. a UCCs and control cells were treated with increasing amounts of the class I HDAC specific inhibitor 4SC-202. The dose–response curves after 72 h 4SC-202 treatment are shown exemplarily for the UCCs VM-CUB1 and UM-UC-3 and the non-urothelial control cells HBLAK and HEK-293. b Near-confluent HBLAK cells were maintained in regular medium (untreated) or differentiated by a Ca2+/FCS protocol and then treated with the indicated concentrations of 4SC-202. After, 72 h viability was measured by the MTT assay. The calculated significances refer to the medium control. Additional significances between the different treatments are shown by brackets. Phase-contrast images of undifferentiated and differentiated cells are shown with a 20 × magnification. c Levels of acetylated α-tubulin and histone H3 and H4 were quantified in VM-CUB1 and UM-UC-3 cells after defined 4SC-202 treatment (0.5/2.5 μM, 24/48 h). Treatment with 3 nM romidepsin served as positive control for H3 and H4 acetylation; treatment with 2.5 μM SAHA served as a positive control for acetylated α-tubulin. DMSO was the solvent control. d Effects of 4SC-202 and SAHA treatment (24/48 h) on HDAC1, HDAC2, HDAC3 and HDAC8 mRNAs in VM-CUB1 and UM-UC-3 cells are shown. The calculated significances refer to the DMSO solvent control. ac acetylated, FCS fetal calf serum
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More detailed experiments were then performed in representative epithelial-like (VM-CUB1) and mesenchymal-like (UM-UC-3) UCC and in HBLAK and HEK-293 cells (Fig. 1a). As a pan-HDAC inhibitor control, all cell lines were likewise treated with SAHA, characterized previously by our group [20, 23, 24, 30]. In the following experiments, the cells were treated generally with 0.5 and 2.5 μM 4SC-202 and 2.5 μM SAHA (approximate IC50 in UCCs). In some experiments, treatments with 3 nM romidepsin (histone acetylation, morphology, class I HDAC expression after HDACi treatment) or 0.5 μM givinostat (morphology) were additionally investigated.
4SC-202 at 2.5 μM and SAHA significantly enhanced the level of acetylated histone H3 in both UCCs. Acetylation changes of histone H4 (at 0.5 or 2.5 μM 4SC-202) and of histone H3 (at 0.5 μM 4SC-202) were weaker and occurred mainly at later time points (Fig. 1c). Romidepsin (3 nM) treated VM-CUB1 cells served as positive controls for histone H3 and H4 acetylation. Acetylation of α-tubulin (depending mainly on HDAC6 activity) was not affected by 4SC-202, whereas SAHA as a positive control induced strong α-tubulin acetylation (Fig. 1c). The mRNA levels of class I HDACs were not consistently deregulated by 4SC-202 (Fig. 1d; Fig. S1 in Online Resource 2) with changes varying between the individual cell lines and without an evident relation to mesenchymal-like (639-V and T24) nor epithelial-like (RT-112 and 5637) phenotype.
To identify potential mechanisms involved in the inhibition of proliferation and clonogenicity in UCCs and control cells, we further investigated changes in cell morphology upon 4SC-202 or SAHA treatment (Fig. 2a). Additionally, morphology of cells treated with the specific HDAC1/2 inhibitors romidepsin (3 nM) and givinostat (0.5 μM) were compared. While only minor changes were observed upon SAHA treatment of UCCs, the number of detached, shrunk and blebbing cells suggestive of induction of apoptosis as well as the number of attached, enlarged and vacant-looking cells suggestive of senescent and/or necrotic cells were increased upon 4SC-202 treatment. The morphology of UCCs following romidepsin and givinostat treatment is characterized by increased cell size and cell flattening. In contrast, 0.5 μM 4SC-202 treated HBLAK cells assumed a senescence-like phenotype. The same changes were observed in HBLAK cells after givinostat and SAHA treatment, whereas romidepsin treated HBLAK cells became elongated with fibroblastoid morphology. Of note, treatment with the higher 4SC-202 concentration (2.5 μM) induced rather an apoptotic phenotype in HBLAK cells (Fig. 2a). The non-urothelial non-malignant HEK-293 cells showed more pronounced morphological changes in cell attachment and shape, indicating apoptotic features following treatment with 4SC-202 than with romidepsin, givinostat or SAHA (Fig. 2a). Clonogenicity was impaired by treatment with either 4SC-202 or SAHA in VM-CUB1 and UM-UC-3 cells (Fig. 2b). Compared to SAHA, the effect of 4SC-202 on clonogenic growth was more durable, resulting in persistent inhibition even 48 h after treatment. In HEK-293 cells, clonogenicity was also more strongly inhibited by 4SC-202 treatment (Fig. 2b).
Fig. 2
Morphology, clonogenicity and senescence following 4SC-202 treatment in UCCs and control cells. a Morphology (additional comparison to romidepsin and givinostat treatment), b Giemsa-staining of grown colonies and c senescence associated β-Gal staining of inhibitor treated VM-CUB1 and UM-UC-3 cells in comparison to the urothelial control cell line HBLAK and non-urothelial control HEK-293 cells. Cells were treated with DMSO, two different concentrations of 4SC-202 (0.5 and 2.5 μM), 3 nM romidepsin, 0.5 μM givinostat or 2.5 μM SAHA (48 h). Phase-contrast images are shown at a 20 × magnification
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To further determine whether treatment with 4SC-202 results in cell senescence, SA-β-Gal staining was performed. As shown in Fig. 2c, neither 4SC-202 nor SAHA significantly increased the fraction of senescent cells in UM-UC-3 and VM-CUB1 cells. An increased fraction of SA-β-Gal positive cells was instead observed in non-urothelial HEK-293 cells and especially in the urothelial HBLAK controls (Fig. 2c).
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3.2 4SC-202 Targets UC Cells by Induction of Apoptosis and Necrosis
Further, we investigated to which extent apoptosis and necrosis contributed to cell death upon treatment with 4SC-202, as compared to SAHA (Fig. 3, supplemental Fig. S2 in Online Resource 2). For the evaluation of an apoptotic response, caspase-3/7 activity was measured after 24 and 48 h treatments with 4SC-202 or SAHA in UCCs and control cells (Fig. 3a). A significant increase in caspase-3/7 activity after SAHA treatment was observed only in UM-UC-3 cells, while treatment with 4SC-202 markedly increased caspase-3/7 activity in all cell lines, especially at the higher concentration. Of note, after treatment with the lower concentration (0.5 μM) of 4SC-202, caspase-3/7 activity was only elevated after 48 h. Notably, caspase-3/7 activity in HBLAK cells was only transiently increased after 24 h (Fig. 3a). More efficient induction of apoptosis by 4SC-202 as compared to SAHA was also evidenced by enhanced cleaved PARP detected by western blotting (Fig. 3b) and in flow-cytometric quantification of apoptosis by Annexin V/PI staining (Fig. 3d, supplemental Fig. S2 in Online Resource 2). In addition to markers of apoptosis, significant release of LDH indicating necrotic cell death was detected in HDACi treated UM-UC-3 cells after 48 h incubation (Fig. 3c). Annexin V/PI staining suggested a mixture of apoptotic and necrotic cell death, with a strong increase in early apoptotic and late apoptotic/necrotic cells and a slight increase of necrotic cells especially after treatment with 2.5 μM 4SC-202 in both VM-CUB1 and UM-UC-3 cells (Fig. 3d, supplemental Fig. S2 in Online Resource 2). To confirm induction of apoptosis and necrosis, VM-CUB1 and UM-UC-3 UCCs were treated with 4SC-202 for 48 h in the presence of Q-VD-OPh (pan-caspase inhibitor) or Necrox-2 (necrosis inhibitor) (Fig. 4). As positive controls, UCCs were treated with etoposide (apoptosis) and H2O2 (necrosis). In VM-CUB1 cells, Q-VD-OPh largely prevented cell death induced by 0.5 μM, but not by 2.5 μM 4SC-202. In contrast, in UM-UC-3 cells the necrosis inhibitor Necrox-2, but not Q-VD-OPh had a positive effect on viability during treatment with 0.5 or 2.5 μM 4SC-202, indicating rather a necrotic cell death mechanism (Fig. 4).
Fig. 3
Mechanisms of cell death upon 4SC-202 treatment in UCCs and control cells. a Caspase 3/7 activity and b protein expression levels of cleaved caspase 3 and cleaved PARP were quantified after treatment with 4SC-202 or SAHA for 24 and 48 h in VM-CUB1, UM-UC-3, HBLAK and HEK-293 cells. c LDH assay indicating necrotic cell death measured after 4SC-202 treatment in VM-CUB1 and UM-UC-3 cells. The percentage of LDH release is normalized to the lysis control. Bortezomib and actinomycin D were used as additional controls. d Induction of necrosis and apoptosis was additionally analyzed by combined Annexin V- and PI-staining in the UCCs VM-CUB1 and UM-UC-3 after treatment with 4SC-202 or SAHA for 24 and 48 h. The percentages in this figure refer to viable cells, necrotic cells, early apoptotic cells and late apoptotic/necrotic cells, respectively. The calculated significances refer to the DMSO solvent control. cl – cleaved
Fig. 4
Investigation of apoptotic and necrotic cell death mechanisms in UCCs induced by class I HDAC inhibitor 4SC-202. Relative cell viability measured by MTT-assay in VM-CUB1 and UM-UC-3 cells following 4SC-202 treatment (0.5/2.5 μM, 48 h) in combination with Q-VD-OPh (pan-caspase inhibitor) or Necrox-2 (necrosis inhibitor). Etoposide or H2O2 treatments were used as positive controls. The determined significances of the treated cells relate to the DMSO solvent control. Additional significances between the different treatments are shown by brackets
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3.3 4SC-202 Induces Strong Mitotic Disturbances in UC Cells
Cell cycle analysis by flow cytometry revealed profound disturbances of the cell cycle by 4SC-202 treatment in all investigated cell lines (Fig. 5a). In particular, in VM-CUB1, UM-UC-3 and HEK-293 cells the G2/M fraction was strongly increased, especially after treatment with 2.5 μM 4SC-202. An increased G1 fraction was more apparent only in HBLAK cells. Notably, after 48 h treatment cell cycle profiles became highly irregular, especially with 2.5 μM 4SC-202, prohibiting proper quantification of the cell cycle distribution (Fig. 5a). However, the accumulation of cells in the G2/M fraction appeared to subside over time and cells with aberrant DNA content became evident. A straightforward explanation for these observations is a disturbed and protracted passage through mitosis with unequal distribution of the DNA to daughter cells. No similar effects were seen after SAHA treatment.
Fig. 5
Changes in cell cycle distribution and expression of cell cycle regulators after 4SC-202 treatment. a Cell cycle changes and amount of apoptotic cells (as sub G1 fraction) following 4SC-202 (0.5/2.5 μM) or 2.5 μM SAHA treatment (24/48 h) in VM-CUB1 cells were measured by cell cycle analysis using flow cytometry. DMSO is the solvent control. Results for the cell lines UM-UC-3, HBLAK and HEK-293 are shown in supplemental Fig. S3 in Online Resource 2. b Cyclins (A, B1, D1, E) and p21 protein expression levels following 4SC-202 (0.5/2.5 μM) or 2.5 μM SAHA treatment were quantified by western blot analysis in comparison to DMSO treatment in VM-CUB1 and UM-UC-3 cells (24/48 h)
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The changes in the cell cycle profiles elicited by 4SC-202 were not reflected in according changes in the expression of cyclins in VM-CUB1 and UM-UC-3 cells (Fig. 5b). Notably, induction of p21CIP1, a classical marker of cell cycle arrest induction by HDAC inhibitors, was less prominent with 4SC-202 compared to SAHA in VM-CUB1 and UM-UC-3 cells after 24 h treatment. Significant p21CIP1 induction was only detected in both UCCs after 48 h of 4SC-202 treatment (Fig. 5b).
To further delineate the cell cycle disturbances, we investigated the nuclear morphology of DAPI-stained VM-CUB1 and UM-UC-3 cells following 4SC-202 treatment (Fig. 6). Strikingly, after 24 h of 4SC-202 treatment, a large proportion of nuclei was involved in irregular mitoses (highly condensed structures in upper level) or presented as strongly fragmented nuclei with many micronuclei. Interphase nuclei with normal morphology were rather infrequent. After 48 h of treatment, the proportion of irregular mitoses was lower and a higher amount of strongly fragmented nuclei was apparent (Fig. 6).
Fig. 6
Aberrant nuclear morphology in 4SC-202 treated VM-CUB1 and UM-UC-3 cells. Nuclear staining with 4′,6-Diamidin-2-phenylindol (DAPI, blue) was performed to distinguish nuclear morphologies (interphase nuclei, mitosis, pro-apoptotic nuclei, micronuclei, irregular nuclei). Representative nuclear stainings are shown for the UCCs VM-CUB1 and UM-UC-3. Cells were counterstained with rhodamine phalloidin. For each cell line, the upper panels show DMSO treated and the lower panels 4SC-202 (0.5/2.5 μM) and 2.5 μM SAHA treated cells (24/48 h)
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Next, we analyzed exemplarily in VM-CUB1 cells whether 4SC-202 (24 h) induces γH2A.X (phosphorylated histone H2A.X on Ser139), to determine to which extent double-strand breaks (DSBs) contribute to the cell cycle disturbances [31, 32]. As γH2A.X can also be induced by other forms of DNA damage [31], we additionally performed double-staining for 53-BP1, which colocalizes with γH2A.X in DSB foci. The γH2A.X signal was strongly increased after 24 h treatment with 2.5 μM 4SC-202, with most of the cells displaying strong pan-nuclear γH2A.X staining (Fig. 7a). In a subpopulation γH2A.X was focally induced, typical of cells with an activated DNA damage response [31]. In VM-CUB1 cells treated with 0.5 μM 4SC-202, the effect was similar, but less strong. 53-BP1 colocalized in some nuclei with γH2A.X foci (especially after treatment with 0.5 μM 4SC-202), but in most of the 4SC-202 treated cells, pan-nuclear γH2A.X staining without colocalization with 53-BP1 appeared dominant (Fig. 7b).
Fig. 7
DNA damage-associated foci in VM-CUB1 cells following 4SC-202 treatment. a Immunofluorescence staining of γH2A.X (green) and nuclei staining with 4′,6-Diamidin-2-phenylindol (DAPI, blue) in VM-CUB1 cells after 24 h treatment (40 × magnification). b Representative immunofluorescence double staining of γH2A.X (green) and 53-BP1 (red) in VM-CUB1 treated cells. The upper panels show DMSO treated and the lower panels shows 4SC-202 (0.5/2.5 μM) and SAHA treated cells (24 h) as indicated
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3.4 Inhibition of LSD1 May Contribute to the Action of 4SC-202 on UC Cells
To investigate to which extent LSD1 inhibition by 4SC-202 might contribute to its activity in UC cells, we compared its effects (at 0.5 and 2.5 μM, after 24 and 48 h treatment) on viability, clonogenicity, cell cycle distribution and morphology to that of romidepsin (3 nM) in combination with the LSD1 inhibitor SP2509 (SP2509). Romidepsin and SP2509 each alone and SAHA were also investigated in parallel. The concentration of SP2509 was chosen at its approximate IC50 (Hoffmann et al., to be published elsewhere). The results for the cell line VM-CUB1 are illustrated in Fig. 8, and results for UM-UC-3 are shown in Fig. S4 in Online Resource 2. LSD1 inhibition alone has rather weak effects on clonogenicity and cell cycle distribution at a concentration impairing viability comparable to treatment with romidepsin (Fig. 8b/c, Fig. S4B/C in Online Resource 2). However, its combination with romidepsin resulted in stronger effects on viability, clonogenicity and cell cycle disturbances (Fig. 8, Fig. S4 in Online Resource 2). For viability and clonogenicity, these effects were largely comparable with those of 4SC-202 at higher concentrations. Interestingly, however, clear differences between the two treatments were evident in the cell cycle profiles and morphological phenotypes of the treated cells (Fig. 8c/d, figure S4C/D in Online Resource 2). In general, concomitant SP2509 treatment appeared to accelerate the effects of romidepsin on cell viability, clonogenicity and alterations in cell cycle progression. In summary, although treatment with the combination of a class I-specific HDACi and an LSD1i elicited comparable effects to 4SC-202 on cell viability and clonogenicity, distinctive differences were observed in the cell cycle profiles and morphology (Fig. 8, Fig. S4 in Online Resource 2).
Fig. 8
Comparison of LSD1 plus HDAC1/2 inhibitor combination vs. 4SC-202 treatment in VM-CUB1 cells. Changes in viability (CellTiter-Glo®, a), clonogenicity (Giemsa-staining of grown colonies, b), cell cycle distribution and amount of apoptotic cells (as sub-G1 fraction; cell cycle analysis using flow cytometry, c) and morphology (d) of VM-CUB1 cells after treatment with 3 nM romidepsin, 0.75 μM SP2509 or both (24 h or 48 h) in comparison to two different concentrations of 4SC-202 (0.5 and 2.5 μM; 24/48 h). Phase-contrast images are shown at a 20 × magnification. Corresponding data for UM-UC-3 cells are shown in Fig. S4 in Online Resource 2
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4 Discussion
In this preclinical study, we evaluated the suitability of the isotype-specific HDAC inhibitor 4SC-202 as a novel treatment approach in UC. 4SC-202 significantly impaired proliferation of UCCs at submicromolar levels and was more efficacious in abrogating clonogenic growth than the pan-HDAC inhibitor SAHA. This is in line with our previous findings on the activity of two other isotype-specific HDAC inhibitors, romidepsin and givinostat, in UC [24]. Like 4SC-202, these inhibitors also target rather specifically the class I HDACs 1 and 2, and treatment with either compound was more efficacious in inhibiting clonogenic growth as compared to SAHA. Taken together, these observations might mean that inhibition of additional HDACs beyond HDAC1-3 is counterproductive in the treatment of UCC. In support of this idea, we have previously reported that specific inhibition of HDAC6 or HDAC8 does not severely impede UCC proliferation or survival [23, 30].
Although 4SC-202 and romidepsin share the important HDACs 1 and 2 in their target profile, their effects on histone acetylation differ. This could have different reasons. First, 4SC-202 is a benzamide type HDACi exhibiting a slower on-kinetic as compared to the bicyclic peptide romidepsin. Second, the in vitro IC50 of romidepsin for HDAC1, HDAC2 and HDAC3 inhibition (IC50: 0.10–0.38 nM) [33] is significantly divergent from its IC50 in MTT assays for UC cells (IC50 72 h: 3.26–6.47 nM) [24]. Accordingly, for our experiments, we used romidepsin at a concentration close to its cellular IC50 values, which exceed the in vitro IC50 for HDAC1-3 activity by more than tenfold, resulting in broader hyperacetylation of histones. Third, treatment with 4SC-202 by inhibiting LSD1 may trigger methylation of lysine residues at some sites, which might interfere with acetylation. Fourth, apart from histone proteins, both compounds may substantially differ in their ability to promote hyperacetylation of non-histone proteins, which may further impact the pattern of histone acetylation [34] . Finally, the action of individual HDACi depends on their ability to not only target specific HDACs, but also to inhibit cellular repressor complexes containing HDAC proteins [35]. Thereby, even HDACi with highly similar profiles in vitro could elicit different acetylation profiles in vivo.
Importantly, inhibition of proliferation and clonogenic growth upon treatment with 4SC-202 was likewise observed in non-cancerous cell lines at comparable concentrations. In comparison to romidepsin and givinostat, 4SC-202 had stronger effects especially on HEK-293 cells, whereas the immortalized urothelial HBLAK cells were less affected and inhibition of growth was rather due to senescence than cell death. Induction of senescence in non-cancerous cells by HDACi has been reported in several other instances. Therefore, the preferential activity of HDACi against tumor cells may rather result from the type of reaction elicited by the drugs [36] than the type of damage caused, as proposed by others [37]. 4SC-202 generally affects proliferating cells more strongly [38]. Accordingly, HBLAK cells that were growth arrested at confluence were much less sensitive than while proliferating. Induction of differentiation did not further diminish their sensitivity. Likewise, the activity of 4SC-202 was significantly higher towards proliferating as compared to arrested (IC50 0.2 μM and > 10 μM, respectively) RKO colon carcinoma cells. Induction of apoptosis was also much stronger in proliferating than in arrested cell lines (detailed report provided upon request by H.K.). In contrast, HEK-293 cells were notably more sensitive to 4SC-202 than to romidepsin and givinostat. This difference could therefore be due to targets of 4SC-202 apart from HDACs. In particular, 4SC-202 may unfold its antineoplastic activity in UC by impacting on LSD1 and Wnt and Hedgehog signaling (data presented at MMC Cancer Stem Cell Symposium 2014 & Keystone Symposium “Stem Cells and Cancer” 2014, data available online at https://4SC.de). Albeit not caused by canonical mechanisms, dysregulation of WNT and Hedgehog signaling has also been observed in bladder cancer [39, 40]. In our experiments, no effect on WNT or Hedgehog signaling by 4SC-202 could be demonstrated in UC cell lines (data not shown).
Inhibition of LSD1 alone also has limited effects on UC cell lines (Hoffmann et al., to be published elsewhere). However, LSD1 inhibition appeared to enhance and especially to accelerate the action of the HDAC1/2 inhibitor romidepsin. The combined action of the two compounds, however, remained different from that of 4SC-202, especially with respect to the cell cycle and morphology. The details of this interaction require further study. Interestingly, a synergism between LSD1 and HDAC inhibition has been demonstrated for glioblastoma, where combined inhibition of LSD1 and HDACs synergistically induce apoptotic cell death in glioblastoma cells, but not in benign control cells [41].
In general, HDAC inhibitors are thought to exert their antineoplastic efficacy on cancer cells mainly by inducing apoptosis [42, 43] and cell cycle arrest, preferably at the G1/S checkpoint [44]. In contrast, necrosis induced by treatment with HDAC inhibitors has been reported only occasionally. For example, necrosis was observed in melanoma cells with mutant B-RAF upon co-treatment with a B-RAF-inhibitor and either panobinostat or SAHA [45]. In UC cells treated with 4SC-202, we observed a mixture of apoptotic and necrotic cell death. Moreover, G1 arrest was clearly not induced. Rather, especially after 24 h and with higher concentrations of 4SC-202, the UCCs accumulated in the G2/M phase. We have observed this response already in previous studies especially with class I HDAC-specific inhibitors [20, 23, 24, 30], but it was even more pronounced upon treatment with 4SC-202. The lack of a G1 arrest in UCCs may be explained by the severe defects in the G1/S checkpoint characteristic for that tumor type [46]. It is nevertheless possible that 4SC-202 acts primarily at the G2/M phase. This contention is supported by the early and strong accumulation of cells in the G2/M phase, but even more so by the morphological observations of disturbed mitoses and pan-nuclear DNA damage. In fact, the various cellular phenotypes observed after 4SC-202 treatment fit those described for cells undergoing mitotic catastrophe. Preclinical investigations in other cancers have likewise provided evidence that 4SC-202 interferes with the normal formation of the mitotic spindle leading to a collapsed spindle apparatus and multiple nucleation centers [38]. In keeping with our observations, very recently, 4SC-202 was reported to induce G2/M arrest and apoptosis in colorectal cancer cells [47]. Another very recent study detected apoptosis induction in hepatocellular carcinoma cells, but did not investigate effects on the cell cycle [48]. Indeed, acetylation/deacetylation cycles of various mitotic proteins and histones [49, 50] are important for mitosis and abnormal mitosis triggers p53-dependent cell cycle arrest or cell death [51]. Therefore, our findings are best rationalized by the following hypothesis. Treatment with 4SC-202 disturbs mitosis in the first cell cycle leading to accumulation of cells in the G2/M phase, followed by irregular cell division, resulting in cells with apparent subG1 and S-phase content that undergo secondary necrosis or apoptosis. Notably, p53 is defective in almost all invasive UC tissues and cell lines [52, 53], which may impede their ability to induce apoptosis after a mitotic catastrophe and contribute to the unusual mode of cell death observed here.
5 Conclusion
4SC-202 exerts a significant antineoplastic effect on UC cells in our preclinical evaluation. The efficacy of the drug was higher as compared to the pan-HDAC inhibitor SAHA. The antineoplastic effect was characterized by combined induction of apoptotic and necrotic cell death. Cell death is likely to be a consequence of cell cycle disruption characterized especially by mitotic disturbances. In summary, use of 4SC-202 is a promising approach for the treatment of urothelial cancer that deserves further investigation.
Compliance with Ethical Standards
Authors’ Contributions
GN, WAS, MJH, HK and MP conceived and designed the study. HK provided 4SC-202 inhibitor from 4SC AG. MP performed most experiments, MJH carried out additional experiments. MP, WAS and GN carried out data analysis. MP and GN prepared the initial manuscript. WAS, MJH and HK contributed to the manuscript. GN supervised the project with the support of WAS. All authors read and approved the final manuscript.
Funding
The work was supported by a grant from the Deutsche Forschungsgemeinschaft (DFG) to GN (Grant-No.: NI 1398/1-1).
Conflicts of Interest
WAS has received a grant for preclinical investigation of 4SC-201 from 4SC AG in the past. 4SC-202 was provided by 4SC AG to GN. 4SC AG paid fees for open access publication; further funding was not granted for this study. HK is an employee of 4SC AG. MP and MJH declare no further conflicts of interest.
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