nach oben

Archives of Virology

Erschienen in:

01.03.2014 | Annotated Sequence Record

Genomic sequence analysis of Helicoverpa armigera nucleopolyhedrovirus isolated from Australia

verfasst von: Huan Zhang, Qing Yang, Qi-Lian Qin, Wei Zhu, Zhi-Fang Zhang, Yi-Nü Li, Ning Zhang, Ji-Hong Zhang

Erschienen in: Archives of Virology | Ausgabe 3/2014

Einloggen, um Zugang zu erhalten

Abstract

The complete genomic sequence of Helicoverpa armigera nucleopolyhedrovirus from Australia, HearNPV-Au, was determined and analyzed. The HearNPV-Au genome was 130,992 bp in size with a G + C content of 39 mol% and contained 134 predicted open reading frames (ORFs) consisting of more than 150 nucleotides. HearNPV-Au shared 94 ORFs with AcMNPV, HearSNPV-G4 and SeMNPV, and was most closely related to HearSNPV-G4. The nucleotide sequence identity between HearNPV-Au and HearSNPV-G4 genome was 99 %. The major differences were found in homologous regions (hrs) and baculovirus repeat ORFs (bro) genes. Five hrs and two bro genes were identified in the HearNPV-Au genome. All of the 134 ORFs identified in HearNPV-Au were also found in HearSNPV-G4, except the homologue of ORF59 (bro) in HearSNPV-G4. The sequence data strongly suggested that HearNPV-Au and HearSNPV-G4 belong to the same virus species.

Nur mit Berechtigung zugänglich

Gettig RR, McCarthy WJ (1982) Genotypic variation among wild isolates of Heliothis spp. nuclear polyhedrosis viruses from different geographical regions. Virol 117:245–252CrossRef

Parnell M, Grzywacz D, Jones KA, Brown M (2002) The strain variation and virulence of granulovirus of diamondback moth (Plutella xylostella Linnaeus, Lep., Yponomeutidae) isolated in Kenya. J Invertebr Pathol 79:192–196PubMedCrossRef

Graham RI, Tyne WI, Possee RD, Sait SM, Hails RS (2004) Genetically variable nucleopolyhedroviruses isolated from spatially separate populations of the winter moth Operophtera brumata (Lepidoptera: Geometridae) in Orkney. J Invertebr Pathol 87:29–38PubMedCrossRef

Cory JS, Green BM, Paul RK, Hunter-Fujita F (2005) Genotypic and phenotypic diversity of a baculovirus population within an individual insect host. J Invertebr Pathol 89:101–111PubMedCrossRef

van Oers MM, Vlak JM (2007) Baculovirus genomics. Curr Drug Targets 8:1051–1068PubMedCrossRef

Rowley DL, Popham HJR, Harrison RL (2011) Genetic variation and virulence of nucleopolyhedroviruses isolated worldwide from the heliothine pests Helicoverpa armigera, Helicoverpa zea, and Heliothis virescens. J Invertebr Pathol 107:112–126PubMedCrossRef

Baillie VL, Bouwer G (2012) High levels of genetic variation within Helicoverpa armigera nucleopolyhedrovirus populations in individual host insects. Arch Virol 157:2281–2289PubMedCrossRef

Baillie VL, Bouwer G (2012) High levels of genetic variation within core Helicoverpa armigera nucleopolyhedrovirus genes. Virus Genes 44:149–162PubMedCrossRef

Zhang GY, Sun XL, Zhang ZX, Zhang ZF, Wan FF (1995) Production and effectiveness of the new formulation of Helicoverpa virus pesticide-emulsifiable suspension. Virol Sinica 10:242–247

10.

Qin QL, Cheng QQ, Zheng JF, Chen XZ, Zhang ST, Li X, Miao L, Zhang H (2008) Production and application of Helicoverpa armigera nucleopolyhedrovirus bio-pesticides trademarked KEYUN on large scale. Biotechnol Bull pp 467–470

11.

Zhang CX, Ma XC, Guo ZJ (2005) Comparison of the complete genome sequence between C1 and G4 isolates of the Helicoverpa armigera single nucleocapsid nucleopolyhedrovirus. Virol 333:190–199CrossRef

12.

Chen XW, Ijkel WFJ, Tarchini R, Sun XL, Sandbrink H, Wang HL, Peters S, Zuidema D, Lankhorst RK, Vlak JM, Hu ZH (2001) The sequence of the Helicoverpa armigera single nucleocapsid nucleopolyhedrovirus genome. J Gen Virol 82:241–257PubMed

13.

Ogembo JG, Caoili BL, Shikata M, Chaeychomsri S, Kobayashi M, Ikeda M (2009) Comparative genomic sequence analysis of novel Helicoverpa armigera nucleopolyhedrovirus (NPV) isolated from Kenya and three other previously sequenced Helicoverpa spp. NPVs. Virus Genes 39:261–272PubMedCrossRef

14.

Chen XW, Zhang WJ, Wong J, Chun G, Lu A, McCutchen BF, Presnail JK, Herrmann R, Dolan M, Tingey S, Hu ZH, Vlak JM (2002) Comparative analysis of the complete genome sequences of Helicoverpa zea and Helicoverpa armigera single-nucleocapsid nucleopolyhedroviruses. J Gen Virol pp 673–684

15.

Tang P, Zhang H, Li YN, Han B, Wang GZ, Qin QL, Zhang ZF (2012) Genomic sequencing and analyses of HearMNPV-a new multinucleocapsid nucleopolyhedrovirus isolated from Helicoverpa armigera. Virol J 9:168PubMedCentralPubMedCrossRef

16.

Chen Y, Lin X, Yi YZ, Lu YY, Zhang ZF (2009) Construction and application of a baculovirus genomic library. Z Naturforsch C 64:574–580PubMed

17.

Xiao H, Qi Y (2007) Genome sequence of Leucania seperata nucleopolyhedrovirus. Virus Genes 35:845–856PubMedCrossRef

18.

Guarino LA, Gonzalez MA, Summers MD (1986) Complete sequence and enhancer function of the homologous DNA regions of Autographa-californica nuclear polyhedrosis-virus. J Virol 60:224–229PubMedCentralPubMed

19.

Pearson M, Bjornson R, Pearson G, Rohrmann G (1992) The Autographa-californica baculovirus genome-evidence for multiple replication origins. Science 257:1382–1384PubMedCrossRef

20.

Theilmann DA, Stewart S (1992) Tandemly repeated sequence at the 3’ end of the ie-2 gene of the baculovirus Orgyia-pseudotsugata multicapsid nuclear polyhedrosis-virus is an enhancer element. Virol 187:97–106CrossRef

21.

Bideshi DK, Renault S, Stasiak K, Federici BA, Bigot Y (2003) Phylogenetic analysis and possible function of bro-like genes, a multigene family widespread among large double-stranded DNA viruses of invertebrates and bacteria. J Gen Viro 84:2531–2544CrossRef

22.

Zemskov EA, Kang WY, Maeda S (2000) Evidence for nucleic acid binding ability and nucleosome association of Bombyx mori nucleopolyhedrovirus BRO proteins. J Virol 74:6784–6789PubMedCentralPubMedCrossRef

23.

Kang WK, Imai N, Suzuki M, Iwanaga M, Matsumoto S, Zemskov EA (2003) Interaction of Bombyx mori nucleopolyhedrovirus BRO-A and host cell protein laminin. Arch Virol 148:99–113PubMedCrossRef

24.

Kang WK, Kurihara M, Matsumoto S (2006) The BRO proteins of Bombyx mori nucleopolyhedrovirus are nucleocytoplasmic shuttling proteins that utilize the CRM1-mediated nuclear export pathway. Virol 350:184–191CrossRef

25.

Li LL, Li OJ, Willis LG, Erlandson M, Theilmann DA, Donly C (2005) Complete comparative genomic analysis of two field isolates of Mamestra configurata nucleopolyhedrovirus-A. J Gen Virol 86:91–105PubMedCrossRef

Titel: Genomic sequence analysis of Helicoverpa armigera nucleopolyhedrovirus isolated from Australia
verfasst von: Huan Zhang
Qing Yang
Qi-Lian Qin
Wei Zhu
Zhi-Fang Zhang
Yi-Nü Li
Ning Zhang
Ji-Hong Zhang
Publikationsdatum: 01.03.2014
Verlag: Springer Vienna
Erschienen in: Archives of Virology / Ausgabe 3/2014
Print ISSN: 0304-8608
Elektronische ISSN: 1432-8798
DOI: https://doi.org/10.1007/s00705-013-1823-3

Leitlinien kompakt für die Innere Medizin

Mit medbee Pocketcards sicher entscheiden.

^{Seit 2022 gehört die medbee GmbH zum Springer Medizin Verlag}

Kostenlos registrieren

Neu im Fachgebiet Innere Medizin

Mehr Lebenszeit mit Abemaciclib bei fortgeschrittenem Brustkrebs?

24.05.2024 Mammakarzinom Nachrichten

In der MONARCHE-3-Studie lebten Frauen mit fortgeschrittenem Hormonrezeptor-positivem, HER2-negativem Brustkrebs länger, wenn sie zusätzlich zu einem nicht steroidalen Aromatasehemmer mit Abemaciclib behandelt wurden; allerdings verfehlte der numerische Zugewinn die statistische Signifikanz.

ADT zur Radiatio nach Prostatektomie: Wenn, dann wohl länger

24.05.2024 Prostatakarzinom Nachrichten

Welchen Nutzen es trägt, wenn die Strahlentherapie nach radikaler Prostatektomie um eine Androgendeprivation ergänzt wird, hat die RADICALS-HD-Studie untersucht. Nun liegen die Ergebnisse vor. Sie sprechen für länger dauernden Hormonentzug.

„Überwältigende“ Evidenz für Tripeltherapie beim metastasierten Prostata-Ca.

22.05.2024 Prostatakarzinom Nachrichten

Patienten mit metastasiertem hormonsensitivem Prostatakarzinom sollten nicht mehr mit einer alleinigen Androgendeprivationstherapie (ADT) behandelt werden, mahnt ein US-Team nach Sichtung der aktuellen Datenlage. Mit einer Tripeltherapie haben die Betroffenen offenbar die besten Überlebenschancen.

So sicher sind Tattoos: Neue Daten zur Risikobewertung

22.05.2024 Melanom Nachrichten

Das größte medizinische Problem bei Tattoos bleiben allergische Reaktionen. Melanome werden dadurch offensichtlich nicht gefördert, die Farbpigmente könnten aber andere Tumoren begünstigen.

Update Innere Medizin

Bestellen Sie unseren Fach-Newsletter und bleiben Sie gut informiert.

Newsletter bestellen

Die Highlights vom Kongress des American College of Cardiology 2024

Springer Medizin

Abstract

Bitte loggen Sie sich ein, um Zugang zu diesem Inhalt zu erhalten

Weitere Artikel der Ausgabe 3/2014

The expression of HCV-associated host factors is dependent on the hepatoma cell line used in HCV studies

Recent evolution of a novel begomovirus causing tomato leaf curl disease in the Al-Batinah region of Oman

A giant Pseudomonas phage from Poland

Investigating a crow die-off in January–February 2011 during the introduction of a new clade of highly pathogenic avian influenza virus H5N1 into Bangladesh

Generation and application of monoclonal antibodies against Rift Valley fever virus nucleocapsid protein NP and glycoproteins Gn and Gc

Virucidal effect of acidic electrolyzed water and neutral electrolyzed water on avian influenza viruses