Introduction
Methods
Sources of Data
Human Case Data
Climate and Hydrology Data
Livestock Reservoir Data
Data Organization
Statistical Analysis
Seasonality
Multivariable Regression Models
Case Crossover Models
Results
Objective I: Environmental Variables and Human Case Counts: 2006–2013
Poisson Regression Analysis
Exposure variable | Univariable regression model | Exposure variable | Case crossover analysis | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
IRR | P value (P ≤ 0.2) | 95% CI | OR | P value (P ≤ 0.05) | 95% CI | |||||||
Climate
|
Lag period
|
Climate
|
Tertile
|
Lag period
c
| ||||||||
Mean air temperature (°C) | No lag | 1.01 | 0.344 | 0.99, 1.12 | Mean air temperature (°C) |
Lowest
| 3 weeks |
0.75
|
0.014
|
0.60, 0.94
| ||
1 month | 1.00 | 0.645 | 0.99, 1.01 | Medium | 3 weeks | 1.18 | 0.200 | 0.92, 1.51 | ||||
Highest | 3 weeks | 1.22 | 0.118 | 0.95, 1.57 | ||||||||
Total precipitation (mm) | No lag | 1.00 | 0.966 | 0.93, 1.08 | Total precipitation (mm) | Lowest | – | – | – | – | – | |
1 month | 0.99 | 0.831 | 0.92, 1.07 | Medium | – | – | – | – | – | |||
Highest | – | – | – | – | – | |||||||
Hydrology
|
Hydrology
| |||||||||||
Water flow (m3/s)b | No lag | – | – | – | – | Water flow (m3/s) | Lowest | 1 week | 0.95 | 0.680 | 0.76, 1.19 | |
1 month | – | – | – | – |
Medium
| 1 week |
1.38
|
0.010
|
1.08, 1.76
| |||
Highest
| 1 week |
0.74
|
0.032
|
0.57, 0.97
| ||||||||
Water level (m) | No lag | 1.11 | 0.804 | 0.48, 2.60 | Water level (m) | Lowest | 1 week | 0.91 | 0.417 | 0.73, 1.14 | ||
1 month |
0.43
|
0.050
|
0.18, 1.00
|
Medium
| 1 week |
1.42
|
0.005
|
1.11, 1.82
| ||||
Highest | 1 week | 0.77 | 0.060 | 0.59, 1.01 |
Case Crossover Analysis
Objective 2: Environmental Variables, Livestock Reservoirs and Human Case Counts, 2006–2008
Poisson Regression Analysis
Exposure variable | Univariable regression model | Exposure variable | Case crossover analysis | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
IRR | P value (P ≤ 0.2) | 95% CI | OR | P value (P ≤ 0.05) | 95% CI | ||||||||
Climate
|
Lag period
|
Climate
|
Tertile
|
Lag period
d
| |||||||||
Mean air temperature (°C) | No lag | 1.02 | 0.624 | 0.93, 1.13 | Mean air temperature (°C) |
Lowest
| 3 weeks |
0.56
|
0.004
|
0.38, 0.83
| |||
1 month |
0.93
|
0.120
|
0.84, 1.02
|
Medium
| 3 weeks |
1.58
|
0.029
|
1.05, 2.38
| |||||
Highest | 3 weeks | 1.32 | 0.188 | 0.87, 2.00 | |||||||||
Total precipitation (mm) | No lag | 1.02 | 0.670 | 0.92, 1.13 | Total precipitation (mm) | Lowest | 4 weeks | 0.94 | 0.733 | 0.64, 1.37 | |||
1 month |
1.10
|
0.070
|
0.99, 1.21
| Medium | 4 weeks | 1.49 | 0.060 | 0.98, 2.27 | |||||
Highest
| 4 weeks |
0.60
|
0.038
|
0.37, 0.97
| |||||||||
Hydrology
|
Hydrology
| ||||||||||||
Water flow (m3/s)c | No lag | – | – | – | – | Water flow (m3/s) | Lowes | – | – | – | – | – | |
1 month | – | – | – | – | Medium | – | – | – | – | – | |||
Highest | – | – | – | – | – | ||||||||
Water level (m) |
No lag
|
6.18
|
0.030
|
1.22, 31.45
| Water level (m) | Lowest | – | – | – | – | – | ||
1 month |
0.25
|
0.150
|
0.04, 1.65
| Medium | – | – | – | – | – | ||||
Highest | – | – | – | – | – | ||||||||
Livestock reservoir | – | 1 week |
1.65
|
0.001
|
1.23, 2.22
|
Regression variable | Multivariable regression model | |||
---|---|---|---|---|
IRR | P value (P ≤ 0.05) | 95% CI | ||
Lag period
| ||||
Cosine month
|
–
|
0.68
|
0.005
|
0.52, 0.89
|
Sine month | – | 0.73 | 0.070 | 0.51, 1.03 |
Year | – | 1.04 | 0.743 | 0.82, 1.31 |
Water level
|
–
|
9.80
|
0.010
|
1.69, 56.71
|
Water level
| 1 month |
0.10
|
0.035
|
0.01, 0.85
|