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Erschienen in: Journal of Hematology & Oncology 1/2023

Open Access 01.12.2023 | Correspondence

A gene signature can predict risk of MGUS progressing to multiple myeloma

verfasst von: Fumou Sun, Yan Cheng, Jun Ying, David Mery, Samer Al Hadidi, Visanu Wanchai, Eric R. Siegel, Hongwei Xu, Dongzheng Gai, Timothy Cody Ashby, Clyde Bailey, Jin-Ran Chen, Carolina Schinke, Sharmilan Thanendrarajan, Maurizio Zangari, Siegfried Janz, Bart Barlogie, Frits Van Rhee, Guido Tricot, John D. Shaughnessy Jr, Fenghuang Zhan

Erschienen in: Journal of Hematology & Oncology | Ausgabe 1/2023

Abstract

Multiple myeloma is preceded by monoclonal gammopathy of undetermined significance (MGUS). Serum markers are currently used to stratify MGUS patients into clinical risk groups. A molecular signature predicting MGUS progression has not been produced. We have explored the use of gene expression profiling to risk-stratify MGUS and developed an optimized signature based on large samples with long-term follow-up. Microarrays of plasma cell mRNA from 334 MGUS with stable disease and 40 MGUS that progressed to MM within 10 years, was used to define a molecular signature of MGUS risk. After a three-fold cross-validation analysis, the top thirty-six genes that appeared in each validation and maximized the concordance between risk score and MGUS progression were included in the gene signature (GS36). The GS36 accurately predicted MGUS progression (C-statistic is 0.928). An optimal cut-point for risk of progression by the GS36 score was found to be 0.7, which identified a subset of 61 patients with a 10-year progression probability of 54.1%. The remainder of the 313 patients had a probability of progression of only 2.2%. The sensitivity and specificity were 82.5% and 91.6%. Furthermore, combination of GS36, free light chain ratio and immunoparesis identified a subset of MGUS patients with 82.4% risk of progression to MM within 10 years. A gene expression signature combined with serum markers created a highly robust model for predicting risk of MGUS progression. These findings strongly support the inclusion of genomic analysis in the management of MGUS to identify patients who may benefit from more frequent monitoring.
Hinweise

Supplementary Information

The online version contains supplementary material available at https://​doi.​org/​10.​1186/​s13045-023-01472-y.
Fumou Sun and Yan Cheng have contributed equally to this study.

Publisher's Note

Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Abkürzungen
MM
Multiple myeloma
MGUS
Monoclonal gammopathy of undetermined significance
GS36
Gene signature 36
GEP
Gene expression profiling
ROC
Receiver operating characteristic
GEP70
70-Gene signature
FLC
Free light chain
PPV
Positive predictive value
NPV
Negative predictive value
CPH
Univariate Cox proportional hazard
DUIg
Decreased uninvolved immunoglobulin
BMPC
Bone marrow plasma cell
MSK
Memorial Sloan Kettering Cancer Center

To the editor

Multiple myeloma (MM) is preceded by monoclonal gammopathy of undetermined significance (MGUS) [1, 2] with a 1.0% annual risk of MGUS progressing to MM [3]. MM patients with a prior known MGUS have better overall survival than those without prior MGUS [4]. At present, using serum markers, MGUS patients can be stratified into clinical risk groups that estimate the risk of progression from MGUS to MM, leading to the development of clinical consensus guidelines [5, 6]. Recently, the Dana-Farber Cancer Institute established the PANGEA model, which included bone marrow plasma cell percentage (BMPC%) in the prediction of myeloma progression, improving the accuracy of prediction [7]. They do not incorporate genetic or whole genome characteristics. All genetic changes associated with myelomagenesis are also present at the MGUS stage [8]. A robust high-risk molecular signature predicting MGUS progression is lacking.
To address this gap, 374 consecutive MGUS patients with baseline gene expression profiling (GEP) data were enrolled to establish the risk model. Of these, 40 patients progressed to MM within 10 years (progressing group), while 334 MGUS had not progressed (stable group). The clinical characteristics of the cohorts are shown in Additional file 2: Table S1. Microarray analysis was performed on mRNA from patients’ plasma cells. We used three-fold cross-validation to identify the gene list. The top thirty-six genes that appeared in each validation and maximized the concordance between risk score and MGUS progression were included in the “gene signature 36” (GS36) (Additional file 2: Table S2). The GS36 score accurately predicted MGUS progression (Harrell's C-statistic is 0.928) (Fig. 1A). An optimal cut-point for risk of progression by the GS36 score was 0.7. Among 40 progressing patients, 33 patients had a GS36 ≥ 0.7, yielding a sensitivity of 82.5%. For the 334 stable patients, only 28 patients had GS36 ≥ 0.7, yielding a specificity of 91.6%. Among the 61 GS36 ≥ 0.7 patients, 33 patients progressed to MM, yielding a probability of MM progression of 54.1%. For the 313 GS36 < 0.7 patients, only 7 patients developed MM, yielding a probability of MM progression of 2.2% (Fig. 1B). Details of methods are provided in Additional file 3.
Comparison with GEP70 showed that GS36 was better at predicting progression (Additional file 1: Fig. S1). Supervised clustering revealed that 24 genes were down-regulated and 12 up-regulated in high-risk MGUS cell samples (Additional file 1: Fig.S2). A total of 593 serial microarrays from 174 MGUS cases revealed that the GS36 score invariably increased as the patients transitioned from MGUS into MM, while the score decreased in the non-progressing group (Fig. 1C, D). We performed external validation using an independent dataset from patients enrolled on SWOG-S0120 [9]. In this dataset, 3 patients progressed to MM, while the other 54 MGUS had not progressed. Among 3 patients who developed MM, all had a GS36 ≥ 0.7. For the remaining 54 stable patients, only 4 patients had GS36 ≥ 0.7, yielding a probability of MM progression of 7.4% (Additional file 1: Fig.S3).
Clinical characteristics were assessed for their association with time to MM progression using a Cox proportional hazard (CPH) model (Additional file 2: Table S3). Increased risk of progression to MM was associated with bone marrow plasma cell (BMPC)% ≥ 7.5%, M-protein ≥ 1.5 g/dL, abnormal free light chains (FLC) ratio (< 0.1 or > 10) and decreased uninvolved immunoglobulins (DUIg). In addition to the hazard ratio (HR) for GS36 (HR = 33.72, p < 0.001) being very high, DUIg (HR = 3.67, p = 0.002) and abnormal FLC ratio (HR = 3.07, p = 0.001) were significant characteristics. The significant characteristics in the univariate CPH models were included in a multivariate CPH model. The results demonstrated that GS36 (HR = 31.32, p < 0.001), DUIg (HR = 2.76, p = 0.021) and abnormal FLC ratio (HR = 2.32, p = 0.022) are independent risk factors for progression (Additional file 2: Table S4).
We combined clinical and molecular variables to model high-risk MGUS using recursive partitioning. The high-risk MGUS patients were characterized as: GS36 ≥ 0.7, abnormal FLC ratio and DUIg (Fig. 2A). This was termed the UAMS risk model. The 10-year probabilities of MGUS progression were 2.0% and 82.4% in the low- and high-risk groups (Fig. 2B).
In a comparison of the UAMS model with Mayo Clinic model [10] and Memorial Sloan Kettering Cancer Center (MSK) model [11], the UAMS model shows great promise, especially considering the SWOG-S0120 data presented (Additional file 2: Table S5 and Additional file 1: Fig. S4 A, B). However, comprehensive external validation using additional patient cohorts will be necessary to accurately assess the performance of the UAMS model in comparison to established models. The Venn diagram depicted in Additional file 1: Fig. S4C showed the overlapping quantities of the patients considered high-risk by UAMS, MSK, and Mayo models. High-risk was diagnosed across all definitions in 8 patients (15.4%).
The top-ranked genes in the GS36 are immunoglobulins (Ig) genes (IGLV1-44, IGKC, IGHA1), which are significantly decreased in the high-risk MGUS group. GEP of samples with a high percentage of normal plasma cells will produce signals for numerous immunoglobulin genes. We are of the opinion that the high levels of Ig genes reflect the presence of normal PC in the purified sample. Thus, our data imply that the absence of a normal plasma cell signature in MGUS is associated with early progression.
In conclusion, we have generated a novel model that integrates molecular and clinical variables that can significantly improve the predictability of progression to overt MM.

Acknowledgements

We are indebted to the clinicians of the Myeloma Institute for Research and Therapy for referring patients to this study and to all the patients who have helped us in our pursuit of a cure.

Declarations

The institutional review board of the University of Arkansas for Medical Sciences approved the research studies, and all subjects provided written informed consent for sample procurement in accordance with the Declaration of Helsinki.
All authors give consent for the publication of the manuscript in Journal of Hematology & Oncology.

Competing interests

The authors declare that they have no competing interests.
Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://​creativecommons.​org/​licenses/​by/​4.​0/​. The Creative Commons Public Domain Dedication waiver (http://​creativecommons.​org/​publicdomain/​zero/​1.​0/​) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

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Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

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Literatur
5.
Zurück zum Zitat Perez-Persona E, Vidriales MB, Mateo G, Garcia-Sanz R, Mateos MV, de Coca AG, et al. New criteria to identify risk of progression in monoclonal gammopathy of uncertain significance and smoldering multiple myeloma based on multiparameter flow cytometry analysis of bone marrow plasma cells. Blood. 2007;110(7):2586–92. https://doi.org/10.1182/blood-2007-05-088443.CrossRefPubMed Perez-Persona E, Vidriales MB, Mateo G, Garcia-Sanz R, Mateos MV, de Coca AG, et al. New criteria to identify risk of progression in monoclonal gammopathy of uncertain significance and smoldering multiple myeloma based on multiparameter flow cytometry analysis of bone marrow plasma cells. Blood. 2007;110(7):2586–92. https://​doi.​org/​10.​1182/​blood-2007-05-088443.CrossRefPubMed
Metadaten
Titel
A gene signature can predict risk of MGUS progressing to multiple myeloma
verfasst von
Fumou Sun
Yan Cheng
Jun Ying
David Mery
Samer Al Hadidi
Visanu Wanchai
Eric R. Siegel
Hongwei Xu
Dongzheng Gai
Timothy Cody Ashby
Clyde Bailey
Jin-Ran Chen
Carolina Schinke
Sharmilan Thanendrarajan
Maurizio Zangari
Siegfried Janz
Bart Barlogie
Frits Van Rhee
Guido Tricot
John D. Shaughnessy Jr
Fenghuang Zhan
Publikationsdatum
01.12.2023
Verlag
BioMed Central
Erschienen in
Journal of Hematology & Oncology / Ausgabe 1/2023
Elektronische ISSN: 1756-8722
DOI
https://doi.org/10.1186/s13045-023-01472-y

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