nach oben

Erschienen in:

13.05.2020 | Brief Report

A new begomovirus isolated from a potyvirus-infected bean plant causes asymptomatic infections in bean and N. benthamiana

verfasst von: Nadia Martínez-Marrero, Jesús Aarón Avalos-Calleros, Elizabeth Chiquito-Almanza, Jorge Alberto Acosta-Gallegos, Salvador Ambriz-Granados, José Luis Anaya-López, Gerardo Rafael Argüello-Astorga

Erschienen in: Archives of Virology | Ausgabe 7/2020

Einloggen, um Zugang zu erhalten

Abstract

In this work, a begomovirus isolated from a bean plant coinfected with the potyviruses bean common mosaic virus and bean common mosaic necrosis virus was characterized. The three viruses were detected by high-throughput sequencing and assembly of total small RNAs, but the begomovirus-related contigs did not allow precise identification. Molecular analysis based on standard DNA amplification techniques revealed the presence of a single bipartite virus, which is a novel begomovirus according to the current taxonomic criteria. Infectious clones were generated and agroinoculated into Phaseolus vulgaris and Nicotiana benthamiana plants. In all cases, viral DNA-A and DNA-B were detected in new growths, but no symptoms were observed, thus indicating that this virus produces asymptomatic infections in both host species.

Nur mit Berechtigung zugänglich

Sasson A, Malpica C (2018) Bioeconomy in Latin America. N Biotechnol 40:40–45. https://doi.org/10.1016/j.nbt.2017.07.007 CrossRefPubMed

FAOSTAT. http://www.fao.org/faostat/es/#data/QC. Accessed 1 Dec 2019

Gibbs A, Ohshima K (2010) Potyviruses and the digital revolution. Annu Rev Phytopathol 48:205–223. https://doi.org/10.1146/annurev-phyto-073009-114404 CrossRefPubMed

Zerbini FM, Briddon RW, Idris A et al (2017) ICTV virus taxonomy profile: geminiviridae. J Gen Virol 98:131–133. https://doi.org/10.1099/jgv.0.000738 CrossRefPubMedPubMedCentral

Rojas MR, Macedo MA, Maliano MR et al (2018) World management of geminiviruses. Annu Rev Phytopathol 56:637–677. https://doi.org/10.1146/annurev-phyto-080615-100327 CrossRefPubMed

Hesketh EL, Saunders K, Fisher C et al (2018) The 3.3 Å structure of a plant geminivirus using cryo-EM. Nat Commun 9:2369. https://doi.org/10.1038/s41467-018-04793-6 CrossRefPubMedPubMedCentral

Xu X, Zhang Q, Hong J et al (2019) Cryo-EM structure of a begomovirus geminate particle. Int J Mol Sci 20:1738. https://doi.org/10.3390/ijms20071738 CrossRefPubMedCentral

De Barro PJ, Liu S-S, Boykin LM, Dinsdale AB (2011) Bemisia tabaci : a statement of species status. Annu Rev Entomol. https://doi.org/10.1146/annurev-ento-112408-085504 CrossRefPubMed

Hanley-Bowdoin L, Bejarano ER, Robertson D, Mansoor S (2013) Geminiviruses: masters at redirecting and reprogramming plant processes. Nat Rev Microbiol 11:777–788. https://doi.org/10.1038/nrmicro3117 CrossRefPubMed

10.

Fondong VN (2013) Geminivirus protein structure and function. Mol Plant Pathol 14:635–649. https://doi.org/10.1111/mpp.12032 CrossRefPubMedPubMedCentral

11.

Xu Y, Li S, Na C et al (2019) Analyses of virus/viroid communities in nectarine trees by next-generation sequencing and insight into viral synergisms implication in host disease symptoms. Sci Rep 9:12261. https://doi.org/10.1038/s41598-019-48714-z CrossRefPubMedPubMedCentral

12.

Jones S, Baizan-Edge A, MacFarlane S, Torrance L (2017) Viral diagnostics in plants using next generation sequencing: computational analysis in practice. Front Plant Sci 8:1770. https://doi.org/10.3389/fpls.2017.01770 CrossRefPubMedPubMedCentral

13.

Idris A, Al-Saleh M, Piatek M et al (2014) Viral metagenomics: analysis of begomoviruses by illumina high-throughput sequencing. Viruses 6:1219–1236. https://doi.org/10.3390/v6031219 CrossRefPubMedPubMedCentral

14.

Rodríguez-Negrete EA, Morales-Aguilar JJ, Domínguez-Duran G et al (2019) High-throughput sequencing reveals differential begomovirus species diversity in non-cultivated plants in Northern-Pacific Mexico. Viruses 11:594. https://doi.org/10.3390/v11070594 CrossRefPubMedCentral

15.

Lepe-Soltero D, Sánchez-García BM, Jiménez-Hernández Y et al (2012) Presence of BCMV and BCMNV in five dry bean-producing states in Mexico. Trop Subtrop Agroecosyst 15:313–321

16.

Beebe S, Ramirez J, Jarvis A et al (2011) Genetic improvement of common beans and the challenges of climate change. In: Yadav SS, Redden RJ, Hatfield JL, Lotze‐Campen H, Hall AJW (eds) Crop adaptation to climate change. Wiley-Blackwell, Oxford, pp 356–369CrossRef

17.

Flores-Estévez N, Acosta-Gallegos JA, Silva-Rosales L (2003) Bean common mosaic virus and Bean common mosaic necrosis virus in Mexico. Plant Dis 87:21–25. https://doi.org/10.1094/PDIS.2003.87.1.21 CrossRefPubMed

18.

Abarshi MM, Mohammed IU, Wasswa P et al (2010) Optimization of diagnostic RT-PCR protocols and sampling procedures for the reliable and cost-effective detection of Cassava brown streak virus. J Virol Methods 163:353–359. https://doi.org/10.1016/j.jviromet.2009.10.023 CrossRefPubMed

19.

Gregorio-Jorge J, Bernal-Alcocer A, Bãuelos-Hernndez B et al (2010) Analysis of a new strain of Euphorbia mosaic virus with distinct replication specificity unveils a lineage of begomoviruses with short Rep sequences in the DNA-B intergenic region. Virol J. https://doi.org/10.1186/1743-422X-7-275 CrossRefPubMedPubMedCentral

20.

Bañuelos-Hernández B, Mauricio-Castillo JA, Cardenas-Conejo Y et al (2012) A new strain of tomato severe leaf curl virus and a unique variant of tomato yellow leaf curl virus from Mexico. Arch Virol. https://doi.org/10.1007/s00705-012-1358-z CrossRefPubMed

21.

Torres-Herrera SI, Romero-Osorio A, Moreno-Valenzuela O et al (2019) A lineage of begomoviruses encode rep and AC4 proteins of enigmatic ancestry: hints on the evolution of geminiviruses in the newworld. Viruses. https://doi.org/10.3390/v11070644 CrossRefPubMedPubMedCentral

22.

Edgar RC (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32:1792–1797. https://doi.org/10.1093/nar/gkh340 CrossRefPubMedPubMedCentral

23.

Muhire BM, Varsani A, Martin DP (2014) SDT: a virus classification tool based on pairwise sequence alignment and identity calculation. PLoS One. https://doi.org/10.1371/journal.pone.0108277 CrossRefPubMedPubMedCentral

24.

Brown JK, Zerbini FM, Navas-Castillo J et al (2015) Revision of Begomovirus taxonomy based on pairwise sequence comparisons. Arch Virol 160:1593–1619. https://doi.org/10.1007/s00705-015-2398-y CrossRefPubMed

25.

Martin DP, Murrell B, Golden M et al (2015) RDP4: detection and analysis of recombination patterns in virus genomes. Virus Evol. https://doi.org/10.1093/ve/vev003 CrossRefPubMedPubMedCentral

26.

Dellaporta SL, Wood J, Hicks JB (1983) A plant DNA minipreparation: Version II. Plant Mol Biol Rep. https://doi.org/10.1007/BF02712670 CrossRef

27.

Chiquito-Almanza E, Acosta-Gallegos J, García-Álvarez N et al (2017) Simultaneous detection of both RNA and DNA viruses infecting dry bean and occurrence of mixed infections by BGYMV, BCMV and BCMNV in the Central-West Region of Mexico. Viruses 9:63. https://doi.org/10.3390/v9040063 CrossRefPubMedCentral

28.

Fuentes A, Carlos N, Ruiz Y et al (2016) Field trial and molecular characterization of RNAi-transgenic tomato plants that exhibit resistance to tomato yellow leaf curl geminivirus. Mol Plant-Microbe Interact 29:197–209. https://doi.org/10.1094/MPMI-08-15-0181-R CrossRefPubMed

29.

Fontenele RS, Lamas NS, Lacorte C et al (2017) A novel geminivirus identified in tomato and cleome plants sampled in Brazil. Virus Res 240:175–179. https://doi.org/10.1016/j.virusres.2017.08.007 CrossRefPubMed

30.

Morinaga T, Ikegami M, Shimotohno K, Miura KI (1987) Total nucleotide sequences of the infectious cloned DNAs of bean golden mosaic virus. Microbiol Immunol 31:147–154. https://doi.org/10.1111/j.1348-0421.1987.tb03078.x CrossRefPubMed

31.

Romay G, Geraud-Pouey F, Chirinos DT et al (2019) Tomato twisted leaf virus: a novel indigenous new world monopartite begomovirus infecting tomato in venezuela. Viruses 11:327. https://doi.org/10.3390/V11040327 CrossRefPubMedCentral

Titel: A new begomovirus isolated from a potyvirus-infected bean plant causes asymptomatic infections in bean and N. benthamiana
verfasst von: Nadia Martínez-Marrero
Jesús Aarón Avalos-Calleros
Elizabeth Chiquito-Almanza
Jorge Alberto Acosta-Gallegos
Salvador Ambriz-Granados
José Luis Anaya-López
Gerardo Rafael Argüello-Astorga
Publikationsdatum: 13.05.2020
Verlag: Springer Vienna
Erschienen in: Archives of Virology / Ausgabe 7/2020
Print ISSN: 0304-8608
Elektronische ISSN: 1432-8798
DOI: https://doi.org/10.1007/s00705-020-04646-y

Leitlinien kompakt für die Innere Medizin

Mit medbee Pocketcards sicher entscheiden.

^{Seit 2022 gehört die medbee GmbH zum Springer Medizin Verlag}

Kostenlos registrieren

Neu im Fachgebiet Innere Medizin

Notfall-TEP der Hüfte ist auch bei 90-Jährigen machbar

26.04.2024 Hüft-TEP Nachrichten

Ob bei einer Notfalloperation nach Schenkelhalsfraktur eine Hemiarthroplastik oder eine totale Endoprothese (TEP) eingebaut wird, sollte nicht allein vom Alter der Patientinnen und Patienten abhängen. Auch über 90-Jährige können von der TEP profitieren.

Niedriger diastolischer Blutdruck erhöht Risiko für schwere kardiovaskuläre Komplikationen

25.04.2024 Hypotonie Nachrichten

Wenn unter einer medikamentösen Hochdrucktherapie der diastolische Blutdruck in den Keller geht, steigt das Risiko für schwere kardiovaskuläre Ereignisse: Darauf deutet eine Sekundäranalyse der SPRINT-Studie hin.

Bei schweren Reaktionen auf Insektenstiche empfiehlt sich eine spezifische Immuntherapie

25.04.2024 Allergien und Intoleranzreaktionen Nachrichten

Insektenstiche sind bei Erwachsenen die häufigsten Auslöser einer Anaphylaxie. Einen wirksamen Schutz vor schweren anaphylaktischen Reaktionen bietet die allergenspezifische Immuntherapie. Jedoch kommt sie noch viel zu selten zum Einsatz.

Therapiestart mit Blutdrucksenkern erhöht Frakturrisiko

25.04.2024 Hypertonie Nachrichten

Beginnen ältere Männer im Pflegeheim eine Antihypertensiva-Therapie, dann ist die Frakturrate in den folgenden 30 Tagen mehr als verdoppelt. Besonders häufig stürzen Demenzkranke und Männer, die erstmals Blutdrucksenker nehmen. Dafür spricht eine Analyse unter US-Veteranen.

Update Innere Medizin

Bestellen Sie unseren Fach-Newsletter und bleiben Sie gut informiert.

Newsletter bestellen

Springer Medizin

Abstract

Bitte loggen Sie sich ein, um Zugang zu diesem Inhalt zu erhalten

Weitere Artikel der Ausgabe 7/2020

A novel putative betapartitivirus isolated from the plant-pathogenic fungus Rhizoctonia solani

Genomic characterization of classical swine fever virus LOM variants with 3′-UTR INDELs from pigs on Jeju Island, South Korea

Studies on the clinical symptoms, virus distribution, and mRNA expression of several antiviral immunity-related genes in grass carp after infection with genotype II grass carp reovirus

Evaluation of the immune response in conventionally weaned pigs infected with porcine deltacoronavirus

Generation of recombinant VP3 protein of infectious bursal disease virus in three different expression systems, antigenic analysis of the obtained polypeptides and development of an ELISA test