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Archives of Virology

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01.04.2011 | Annotated Sequence Record

Complete genome sequence of a novel badnavirus, banana streak IM virus

verfasst von: Andrew D. W. Geering, Judith N. Parry, John E. Thomas

Erschienen in: Archives of Virology | Ausgabe 4/2011

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Abstract

In 1999, banana streak disease outbreaks occurred at two locations in Australia in new banana hybrids that were being screened for fusarium wilt resistance. Two different badnaviruses, banana streak GF virus and a newly discovered virus called banana streak IM virus (BSIMV), were detected in these plants. The complete nucleotide sequence of the BSIMV genome was determined and comprised 7768 nt. Three open reading frames were detected, the first beginning with a non-conventional start codon (CUG). A 55-nt repetition in the putative pregenomic RNA promoter was also identified. Phylogenetic analysis suggests that BSIMV is most closely related to banana streak VN virus.

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Titel: Complete genome sequence of a novel badnavirus, banana streak IM virus
verfasst von: Andrew D. W. Geering
Judith N. Parry
John E. Thomas
Publikationsdatum: 01.04.2011
Verlag: Springer Vienna
Erschienen in: Archives of Virology / Ausgabe 4/2011
Print ISSN: 0304-8608
Elektronische ISSN: 1432-8798
DOI: https://doi.org/10.1007/s00705-011-0946-7

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