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01.06.2023 | Brief Report

Complete genome sequence of a novel lytic phage of Xanthomonas oryzae pv. oryzae, the bacterial leaf blight pathogen in rice

verfasst von: Pham D.T. My, Tu Q. Vinh, To H. Ngoc, Pham N.Q. Anh, Le T. M. Duyen, Nguyen M. Thien, Le T.T. Tien, Vo T. Phuc, Huynh N. Oanh, Le P. Nga, Hoang A. Hoang

Erschienen in: Archives of Virology | Ausgabe 6/2023

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Abstract

Bacteriophage L522, which infects Xanthomonas oryzae pv. oryzae, was isolated from a paddy leaf sample collected in Long An province, Vietnam. The phage shows myovirus morphology based on transmission electron microscopy. It displays a latent period and burst size of approximately 3 h and 63 new virions per infected cell (PFU/infected cell), respectively. The genome of L522 is 44,497 bp in length, with 52% GC content. Of the 63 genes identified, functions were predicted for 26. No virulence or antibiotic-resistance genes were detected. The results of a BLASTn search showed similarity to a previously reported Xanthomonas phage, with 85% average nucleotide sequence identity and 87.15% query coverage. Thus, this L522 is a representative of a new species in the genus Xipdecavirus.

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Titel: Complete genome sequence of a novel lytic phage of Xanthomonas oryzae pv. oryzae, the bacterial leaf blight pathogen in rice
verfasst von: Pham D.T. My
Tu Q. Vinh
To H. Ngoc
Pham N.Q. Anh
Le T. M. Duyen
Nguyen M. Thien
Le T.T. Tien
Vo T. Phuc
Huynh N. Oanh
Le P. Nga
Hoang A. Hoang
Publikationsdatum: 01.06.2023
Verlag: Springer Vienna
Erschienen in: Archives of Virology / Ausgabe 6/2023
Print ISSN: 0304-8608
Elektronische ISSN: 1432-8798
DOI: https://doi.org/10.1007/s00705-023-05788-5

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Complete genome sequence of a novel lytic phage of Xanthomonas oryzae pv. oryzae, the bacterial leaf blight pathogen in rice

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