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03.02.2022 | Annotated Sequence Record

Complete genome sequence of a novel virga-like virus infecting Hevea brasiliensis

verfasst von: Sixi Chen, Fengjuan Yu, Zhaotong Li, Yonglei Zhang, Hongxing Wang, Jinling Zhai, Xi Huang

Erschienen in: Archives of Virology | Ausgabe 3/2022

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Abstract

Here, we report the complete genome sequence and organization of a novel virus detected in rubber trees (Hevea brasiliensis). Because the infected plants were asymptomatic, this virus was tentatively named "rubber tree latent virus 1" (RTLV1). The full genome of RTLV1 is 9,422 nt in length and contains three open reading frames with a 157-nt 5' untranslated region (UTR) and a 316-nt 3' UTR. The replicase shares the highest amino acid (aa) sequence identity (32.62%), with only 31% query coverage, with the replicase of Hubei virga-like virus 11. Phylogenetic analysis based on the aa sequence of ORF1 showed that RTLV1 clustered with unclassified members of the family Virgaviridae in a clade that was not closely related to any genus in this family.

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Titel: Complete genome sequence of a novel virga-like virus infecting Hevea brasiliensis
verfasst von: Sixi Chen
Fengjuan Yu
Zhaotong Li
Yonglei Zhang
Hongxing Wang
Jinling Zhai
Xi Huang
Publikationsdatum: 03.02.2022
Verlag: Springer Vienna
Erschienen in: Archives of Virology / Ausgabe 3/2022
Print ISSN: 0304-8608
Elektronische ISSN: 1432-8798
DOI: https://doi.org/10.1007/s00705-021-05306-5

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Complete genome sequence of a novel virga-like virus infecting Hevea brasiliensis

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