Skip to main content
Erschienen in: European Journal of Clinical Microbiology & Infectious Diseases 4/2009

01.04.2009 | Concise Article

Unexpected substitution of dominant rotavirus G genotypes in French hospitalized children over five consecutive seasons

verfasst von: A. de Rougemont, J. Kaplon, P. Lebon, F. Huet, F. Denis, S. Alain, L. Fourcade, J. Grosjean, M.-J. El-Hajje, D. Gendrel, P. Pothier

Erschienen in: European Journal of Clinical Microbiology & Infectious Diseases | Ausgabe 4/2009

Einloggen, um Zugang zu erhalten

Abstract

The study was designed to evaluate the circulation of group A rotaviruses in French hospitalized children, and to detect unusual strains. This prospective study was conducted from 2001 to 2006 in children consulting for acute diarrhea at the pediatric emergency department in three French University Hospitals. The rotaviruses were detected by rapid test and genotyped by RT-PCR on the basis of their outer capsid proteins VP4 (P-type) and VP7 (G-type). The stools from 757 children were analyzed. G1P[8] strains were predominant (44.0%), followed by G9P[8] (17.7%), G3P[8] 13.1%, G4P[8] (9.5%), and G2P[4] (1.8%); mixed rotavirus infections occurred in 2.3%. G9 rotaviruses emerged during the 2004–2005 season (73.4%) and remained the second most prevalent strains. Few unusual strains, G6, G8, G12 and P[6]-types, were detected. The monitoring of rotavirus infections should be maintained to document strain distribution and to assess the emergence of new reassortants that may not respond to current rotavirus vaccines.
Literatur
1.
Zurück zum Zitat Bishop RF (1994) Natural history of human rotavirus infections. In: Kapikian AZ (ed) Viral infections of the gastrointestinal tract. Dekker, New York, pp 131–168 Bishop RF (1994) Natural history of human rotavirus infections. In: Kapikian AZ (ed) Viral infections of the gastrointestinal tract. Dekker, New York, pp 131–168
2.
Zurück zum Zitat Jiang B, Gentsch JR, Glass RI (2002) The role of serum antibodies in the protection against rotavirus disease: an overview. Clin Infect Dis 34(10):1351–1361, doi:10.1086/340103 PubMedCrossRef Jiang B, Gentsch JR, Glass RI (2002) The role of serum antibodies in the protection against rotavirus disease: an overview. Clin Infect Dis 34(10):1351–1361, doi:10.​1086/​340103 PubMedCrossRef
3.
Zurück zum Zitat Estes MK, Kapikian AZ (2007) Rotaviruses. In: Knipe DM, Howley PM (eds) Fields virology. Lippincott Williams & Wilkins, Philadelphia, pp 1917–1974 Estes MK, Kapikian AZ (2007) Rotaviruses. In: Knipe DM, Howley PM (eds) Fields virology. Lippincott Williams & Wilkins, Philadelphia, pp 1917–1974
4.
Zurück zum Zitat Gentsch JR, Laird AR, Bielfelt B, Griffin DD, Banyai K, Ramachandran M et al (2005) Serotype diversity and reassortment between human and animal rotavirus strains: implications for rotavirus vaccine programs. J Infect Dis 192(Suppl 1):S146–S159, doi:10.1086/431499 PubMedCrossRef Gentsch JR, Laird AR, Bielfelt B, Griffin DD, Banyai K, Ramachandran M et al (2005) Serotype diversity and reassortment between human and animal rotavirus strains: implications for rotavirus vaccine programs. J Infect Dis 192(Suppl 1):S146–S159, doi:10.​1086/​431499 PubMedCrossRef
5.
Zurück zum Zitat Santos N, Hoshino Y (2005) Global distribution of rotavirus serotypes/genotypes and its implication for the development and implementation of an effective rotavirus vaccine. Rev Med Virol 15(1):29–56, doi:10.1002/rmv.448 PubMedCrossRef Santos N, Hoshino Y (2005) Global distribution of rotavirus serotypes/genotypes and its implication for the development and implementation of an effective rotavirus vaccine. Rev Med Virol 15(1):29–56, doi:10.​1002/​rmv.​448 PubMedCrossRef
6.
Zurück zum Zitat Arista S, Giammanco GM, De Grazia S, Migliore MC, Martella V, Cascio A (2004) Molecular characterization of the genotype G9 human rotavirus strains recovered in Palermo, Italy, during the winter of 1999–2000. Epidemiol Infect 132(2):343–349, doi:10.1017/S0950268803001602 PubMedCrossRef Arista S, Giammanco GM, De Grazia S, Migliore MC, Martella V, Cascio A (2004) Molecular characterization of the genotype G9 human rotavirus strains recovered in Palermo, Italy, during the winter of 1999–2000. Epidemiol Infect 132(2):343–349, doi:10.​1017/​S095026880300160​2 PubMedCrossRef
8.
Zurück zum Zitat Bon F, Fromantin C, Aho S, Pothier P, Kohli E (2000) G and P genotyping of rotavirus strains circulating in France over a three-year period: detection of G9 and P[6] strains at low frequencies. The AZAY Group. J Clin Microbiol 38(4):1681–1683PubMed Bon F, Fromantin C, Aho S, Pothier P, Kohli E (2000) G and P genotyping of rotavirus strains circulating in France over a three-year period: detection of G9 and P[6] strains at low frequencies. The AZAY Group. J Clin Microbiol 38(4):1681–1683PubMed
11.
Zurück zum Zitat Banyai K, Gentsch JR, Schipp R, Jakab F, Meleg E, Mihaly I et al (2005) Dominating prevalence of P[8],G1 and P[8],G9 rotavirus strains among children admitted to hospital between 2000 and 2003 in Budapest, Hungary. J Med Virol 76(3):414–423, doi:10.1002/jmv.20372 PubMedCrossRef Banyai K, Gentsch JR, Schipp R, Jakab F, Meleg E, Mihaly I et al (2005) Dominating prevalence of P[8],G1 and P[8],G9 rotavirus strains among children admitted to hospital between 2000 and 2003 in Budapest, Hungary. J Med Virol 76(3):414–423, doi:10.​1002/​jmv.​20372 PubMedCrossRef
12.
Zurück zum Zitat Rahman M, Matthijnssens J, Goegebuer T, De Leener K, Vanderwegen L, van der Donck I et al (2005) Predominance of rotavirus G9 genotype in children hospitalized for rotavirus gastroenteritis in Belgium during 1999–2003. J Clin Virol 33(1):1–6, doi:10.1016/j.jcv.2004.09.020 PubMedCrossRef Rahman M, Matthijnssens J, Goegebuer T, De Leener K, Vanderwegen L, van der Donck I et al (2005) Predominance of rotavirus G9 genotype in children hospitalized for rotavirus gastroenteritis in Belgium during 1999–2003. J Clin Virol 33(1):1–6, doi:10.​1016/​j.​jcv.​2004.​09.​020 PubMedCrossRef
14.
Zurück zum Zitat Sanchez-Fauquier A, Montero V, Moreno S, Sole M, Colomina J, Iturriza-Gómara M et al (2006) Human rotavirus G9 and G3 as major cause of diarrhea in hospitalized children, Spain. Emerg Infect Dis 12(10):1536–1541PubMed Sanchez-Fauquier A, Montero V, Moreno S, Sole M, Colomina J, Iturriza-Gómara M et al (2006) Human rotavirus G9 and G3 as major cause of diarrhea in hospitalized children, Spain. Emerg Infect Dis 12(10):1536–1541PubMed
15.
Zurück zum Zitat Van Damme P, Giaquinto C, Maxwell M, Todd P, Van der Wielen M (2007) Distribution of rotavirus genotypes in Europe, 2004–2005: the REVEAL Study. J Infect Dis 195(Suppl 1):S17–S25, doi:10.1086/516715 PubMedCrossRef Van Damme P, Giaquinto C, Maxwell M, Todd P, Van der Wielen M (2007) Distribution of rotavirus genotypes in Europe, 2004–2005: the REVEAL Study. J Infect Dis 195(Suppl 1):S17–S25, doi:10.​1086/​516715 PubMedCrossRef
17.
Zurück zum Zitat de Rougemont A, Kaplon J, Billaud G, Lina B, Pinchinat S, Derrough T, Caulin E, Pothier P, Floret D (2008) Sensitivity and specificity of the VIKIA® Rota-Adeno immuno-chromatographic test (bioMérieux) and the IDEIA™ Rotavirus ELISA kit (Dako) compared to genotyping. Pathol Biol, doi:10.1016/j.patbio.2008.08. 004 de Rougemont A, Kaplon J, Billaud G, Lina B, Pinchinat S, Derrough T, Caulin E, Pothier P, Floret D (2008) Sensitivity and specificity of the VIKIA® Rota-Adeno immuno-chromatographic test (bioMérieux) and the IDEIA™ Rotavirus ELISA kit (Dako) compared to genotyping. Pathol Biol, doi:10.​1016/​j.​patbio.​2008.​08.​ 004
18.
Zurück zum Zitat Gouvea V, Glass RI, Woods P, Taniguchi K, Clark HF, Forrester B et al (1990) Polymerase chain reaction amplification and typing of rotavirus nucleic acid from stool specimens. J Clin Microbiol 28(2):276–282PubMed Gouvea V, Glass RI, Woods P, Taniguchi K, Clark HF, Forrester B et al (1990) Polymerase chain reaction amplification and typing of rotavirus nucleic acid from stool specimens. J Clin Microbiol 28(2):276–282PubMed
19.
Zurück zum Zitat Gentsch JR, Glass RI, Woods P, Gouvea V, Gorziglia M, Flores J et al (1992) Identification of group A rotavirus gene 4 types by polymerase chain reaction. J Clin Microbiol 30(6):1365–1373PubMed Gentsch JR, Glass RI, Woods P, Gouvea V, Gorziglia M, Flores J et al (1992) Identification of group A rotavirus gene 4 types by polymerase chain reaction. J Clin Microbiol 30(6):1365–1373PubMed
20.
Zurück zum Zitat Iturriza-Gómara M, Green J, Brown DW, Desselberger U, Gray JJ (1999) Comparison of specific and random priming in the reverse transcriptase polymerase chain reaction for genotyping group A rotaviruses. J Virol Methods 78(1–2):93–103, doi:10.1016/S0166-0934(98)00168-2 PubMedCrossRef Iturriza-Gómara M, Green J, Brown DW, Desselberger U, Gray JJ (1999) Comparison of specific and random priming in the reverse transcriptase polymerase chain reaction for genotyping group A rotaviruses. J Virol Methods 78(1–2):93–103, doi:10.​1016/​S0166-0934(98)00168-2 PubMedCrossRef
22.
Zurück zum Zitat Iturriza-Gómara M, Green J, Brown DW, Desselberger U, Gray JJ (2000) Diversity within the VP4 gene of rotavirus P[8] strains: implications for reverse transcription-PCR genotyping. J Clin Microbiol 38(2):898–901PubMed Iturriza-Gómara M, Green J, Brown DW, Desselberger U, Gray JJ (2000) Diversity within the VP4 gene of rotavirus P[8] strains: implications for reverse transcription-PCR genotyping. J Clin Microbiol 38(2):898–901PubMed
25.
Zurück zum Zitat Stupka JA, Parra GI, Gomez J, Arbiza J (2007) Detection of human rotavirus G9P[8] strains circulating in Argentina: phylogenetic analysis of VP7 and NSP4 genes. J Med Virol 79(6):838–842, doi:10.1002/jmv.20841 PubMedCrossRef Stupka JA, Parra GI, Gomez J, Arbiza J (2007) Detection of human rotavirus G9P[8] strains circulating in Argentina: phylogenetic analysis of VP7 and NSP4 genes. J Med Virol 79(6):838–842, doi:10.​1002/​jmv.​20841 PubMedCrossRef
26.
Zurück zum Zitat Diwakarla CS, Palombo EA (1999) Genetic and antigenic variation of capsid protein VP7 of serotype G1 human rotavirus isolates. J Gen Virol 80(Pt 2):341–344PubMed Diwakarla CS, Palombo EA (1999) Genetic and antigenic variation of capsid protein VP7 of serotype G1 human rotavirus isolates. J Gen Virol 80(Pt 2):341–344PubMed
27.
Zurück zum Zitat Arista S, Giammanco GM, De Grazia S, Ramirez S, Lo Biundo C, Colomba C et al (2006) Heterogeneity and temporal dynamics of evolution of G1 human rotaviruses in a settled population. J Virol 80(21):10724–10733, doi:10.1128/JVI.00340-06 PubMedCrossRef Arista S, Giammanco GM, De Grazia S, Ramirez S, Lo Biundo C, Colomba C et al (2006) Heterogeneity and temporal dynamics of evolution of G1 human rotaviruses in a settled population. J Virol 80(21):10724–10733, doi:10.​1128/​JVI.​00340-06 PubMedCrossRef
29.
Zurück zum Zitat Snodgrass DR, Fitzgerald T, Campbell I, Scott FM, Browning GF, Miller DL et al (1990) Rotavirus serotypes 6 and 10 predominate in cattle. J Clin Microbiol 28(3):504–507PubMed Snodgrass DR, Fitzgerald T, Campbell I, Scott FM, Browning GF, Miller DL et al (1990) Rotavirus serotypes 6 and 10 predominate in cattle. J Clin Microbiol 28(3):504–507PubMed
31.
Zurück zum Zitat O’Halloran F, Lynch M, Cryan B, O’Shea H, Fanning S (2000) Molecular characterization of rotavirus in Ireland: detection of novel strains circulating in the population. J Clin Microbiol 38(9):3370–3374PubMed O’Halloran F, Lynch M, Cryan B, O’Shea H, Fanning S (2000) Molecular characterization of rotavirus in Ireland: detection of novel strains circulating in the population. J Clin Microbiol 38(9):3370–3374PubMed
32.
Zurück zum Zitat Buesa J, de Souza CO, Asensi M, Martinez C, Prat J, Gil MT (2000) VP7 and VP4 genotypes among rotavirus strains recovered from children with gastroenteritis over a 3-year period in Valencia, Spain. Eur J Epidemiol 16(6):501–506, doi:10.1023/A:1007618215377 PubMedCrossRef Buesa J, de Souza CO, Asensi M, Martinez C, Prat J, Gil MT (2000) VP7 and VP4 genotypes among rotavirus strains recovered from children with gastroenteritis over a 3-year period in Valencia, Spain. Eur J Epidemiol 16(6):501–506, doi:10.​1023/​A:​1007618215377 PubMedCrossRef
33.
Zurück zum Zitat Cunliffe NA, Gentsch JR, Kirkwood CD, Gondwe JS, Dove W, Nakagomi O et al (2000) Molecular and serologic characterization of novel serotype G8 human rotavirus strains detected in Blantyre, Malawi. Virology 274(2):309–320, doi:10.1006/viro.2000.0456 PubMedCrossRef Cunliffe NA, Gentsch JR, Kirkwood CD, Gondwe JS, Dove W, Nakagomi O et al (2000) Molecular and serologic characterization of novel serotype G8 human rotavirus strains detected in Blantyre, Malawi. Virology 274(2):309–320, doi:10.​1006/​viro.​2000.​0456 PubMedCrossRef
34.
Zurück zum Zitat Taniguchi K, Urasawa T, Kobayashi N, Gorziglia M, Urasawa S (1990) Nucleotide sequence of VP4 and VP7 genes of human rotaviruses with subgroup I specificity and long RNA pattern: implication for new G serotype specificity. J Virol 64(11):5640–5644PubMed Taniguchi K, Urasawa T, Kobayashi N, Gorziglia M, Urasawa S (1990) Nucleotide sequence of VP4 and VP7 genes of human rotaviruses with subgroup I specificity and long RNA pattern: implication for new G serotype specificity. J Virol 64(11):5640–5644PubMed
35.
Zurück zum Zitat Pun SB, Nakagomi T, Sherchand JB, Pandey BD, Cuevas LE, Cunliffe NA et al (2007) Detection of G12 human rotaviruses in Nepal. Emerg Infect Dis 13(3):482–484PubMedCrossRef Pun SB, Nakagomi T, Sherchand JB, Pandey BD, Cuevas LE, Cunliffe NA et al (2007) Detection of G12 human rotaviruses in Nepal. Emerg Infect Dis 13(3):482–484PubMedCrossRef
36.
Zurück zum Zitat Kheyami AM, Nakagomi T, Nakagomi O, Dove W, Hart CA, Cunliffe NA (2008) Molecular epidemiology of rotavirus diarrhea among children in Saudi Arabia: first detection of G9 and G12 strains. J Clin Microbiol 46(4):1185–1191, doi:10.1128/JCM.02244-07 PubMedCrossRef Kheyami AM, Nakagomi T, Nakagomi O, Dove W, Hart CA, Cunliffe NA (2008) Molecular epidemiology of rotavirus diarrhea among children in Saudi Arabia: first detection of G9 and G12 strains. J Clin Microbiol 46(4):1185–1191, doi:10.​1128/​JCM.​02244-07 PubMedCrossRef
Metadaten
Titel
Unexpected substitution of dominant rotavirus G genotypes in French hospitalized children over five consecutive seasons
verfasst von
A. de Rougemont
J. Kaplon
P. Lebon
F. Huet
F. Denis
S. Alain
L. Fourcade
J. Grosjean
M.-J. El-Hajje
D. Gendrel
P. Pothier
Publikationsdatum
01.04.2009
Verlag
Springer-Verlag
Erschienen in
European Journal of Clinical Microbiology & Infectious Diseases / Ausgabe 4/2009
Print ISSN: 0934-9723
Elektronische ISSN: 1435-4373
DOI
https://doi.org/10.1007/s10096-008-0640-1

Weitere Artikel der Ausgabe 4/2009

European Journal of Clinical Microbiology & Infectious Diseases 4/2009 Zur Ausgabe

Leitlinien kompakt für die Innere Medizin

Mit medbee Pocketcards sicher entscheiden.

Seit 2022 gehört die medbee GmbH zum Springer Medizin Verlag

Notfall-TEP der Hüfte ist auch bei 90-Jährigen machbar

26.04.2024 Hüft-TEP Nachrichten

Ob bei einer Notfalloperation nach Schenkelhalsfraktur eine Hemiarthroplastik oder eine totale Endoprothese (TEP) eingebaut wird, sollte nicht allein vom Alter der Patientinnen und Patienten abhängen. Auch über 90-Jährige können von der TEP profitieren.

Niedriger diastolischer Blutdruck erhöht Risiko für schwere kardiovaskuläre Komplikationen

25.04.2024 Hypotonie Nachrichten

Wenn unter einer medikamentösen Hochdrucktherapie der diastolische Blutdruck in den Keller geht, steigt das Risiko für schwere kardiovaskuläre Ereignisse: Darauf deutet eine Sekundäranalyse der SPRINT-Studie hin.

Bei schweren Reaktionen auf Insektenstiche empfiehlt sich eine spezifische Immuntherapie

Insektenstiche sind bei Erwachsenen die häufigsten Auslöser einer Anaphylaxie. Einen wirksamen Schutz vor schweren anaphylaktischen Reaktionen bietet die allergenspezifische Immuntherapie. Jedoch kommt sie noch viel zu selten zum Einsatz.

Therapiestart mit Blutdrucksenkern erhöht Frakturrisiko

25.04.2024 Hypertonie Nachrichten

Beginnen ältere Männer im Pflegeheim eine Antihypertensiva-Therapie, dann ist die Frakturrate in den folgenden 30 Tagen mehr als verdoppelt. Besonders häufig stürzen Demenzkranke und Männer, die erstmals Blutdrucksenker nehmen. Dafür spricht eine Analyse unter US-Veteranen.

Update Innere Medizin

Bestellen Sie unseren Fach-Newsletter und bleiben Sie gut informiert.